Pre_GI: BLASTP Hits

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Query: NC_009439:1174432:1175380 Pseudomonas mendocina ymp, complete genome

Start: 1175380, End: 1177296, Length: 1917

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014410:2329838:2337732233773223413583627Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,5'-Nucleotidase domain protein9e-29129
NC_016584:3847663:3868582386858238706092028Desulfosporosinus orientis DSM 765 chromosome, complete genome5'-nucleotidase7e-26119
NC_016935:976059:9760599760599782332175Paenibacillus mucilaginosus 3016 chromosome, complete genome5'-nucleotidase7e-23109
NC_010674:2930259:2933361293336129351091749Clostridium botulinum B str. Eklund 17B, complete genomenucleotidase1e-21105
NC_010723:2735196:2737652273765227394001749Clostridium botulinum E3 str. Alaska E43, complete genomenucleotidase2e-21104
NC_008687:45967:4596745967475681602Paracoccus denitrificans PD1222 chromosome 2, complete sequence5'-Nucleotidase domain protein6e-2099.8
NC_014483:1179286:1179286117928611810491764Paenibacillus polymyxa E681 chromosome, complete genome5'-nucleotidase/2',3'-cyclic phosphodiesterase2e-1997.8
NC_009523:1025556:1045694104569410475171824Roseiflexus sp. RS-1 chromosome, complete genome5'-nucleotidase domain-containing protein1e-1895.5
NC_004193:375416:375416375416675301299886Oceanobacillus iheyensis HTE831, complete genome2e-1894.4
NC_004193:375416:5309605309605346793720Oceanobacillus iheyensis HTE831, complete genomehypothetical protein1e-1792.4
NC_016593:3249767:3263467326346732665053039Geobacillus thermoleovorans CCB_US3_UF5 chromosome, complete2',3'-cyclic-nucleotide 2'-phosphodiesterase4e-1687
NC_015160:3996764:4010786401078640122551470Odoribacter splanchnicus DSM 20712 chromosome, complete genomemetallophosphoesterase9e-1685.9
NC_015500:2866027:2867855286785528694141560Treponema brennaborense DSM 12168 chromosome, complete genome5'-nucleotidase1e-1585.1
NC_015311:24071:468484684847687840Prevotella denticola F0289 chromosome, complete genomeSer/Thr phosphatase family protein3e-1584
NC_018607:805966:8129768129768145201545Brachyspira pilosicoli B2904 chromosome, complete genome5'-nucleotidase4e-1480.5
NC_014330:609982:6315816315816330981518Brachyspira pilosicoli 95/1000 chromosome, complete genome5-nucleotidase/2,3-cyclic phosphodiesterase and-like esterase7e-1479.7
NC_018604:2053585:2077964207796420795081545Brachyspira pilosicoli WesB complete genome5-nucleotidase/2,3-cyclic phosphodiesterase and-like esterase8e-1479.3
NC_019908:21970:3227332273338171545Brachyspira pilosicoli P43/6/78 chromosome, complete genome5'-nucleotidase7e-1479.3
NC_014623:5029932:5077370507737050792201851Stigmatella aurantiaca DW4/3-1 chromosome, complete genome2',3'-cyclic-nucleotide 2'-phosphodiesterase1e-1379
NC_015711:4957053:4959024495902449614082385Myxococcus fulvus HW-1 chromosome, complete genome5'-nucleotidase family protein1e-1378.6
NC_014972:3604534:3632004363200436338871884Desulfobulbus propionicus DSM 2032 chromosome, complete genome5'-nucleotidase2e-1377.8
NC_012438:1564794:1570990157099015727231734Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeSer/Thr protein phosphatase family protein1e-1275.1
NC_009663:2089268:2113603211360321151591557Sulfurovum sp. NBC37-1, complete genome5'-nucleotidase2e-1274.7
NC_013517:4208939:4276639427663942782311593Sebaldella termitidis ATCC 33386, complete genome5'-Nucleotidase domain protein3e-1274.3
NC_016940:4326000:434409343440934345052960Saprospira grandis str. Lewin chromosome, complete genomemetallophosphoesterase6e-1273.2
NC_015850:2259769:2270535227053522722441710Acidithiobacillus caldus SM-1 chromosome, complete genomesulfur oxidation protein SoxB2e-1171.2
NC_009443:1996812:2020481202048120218271347Streptococcus suis 98HAH33, complete genome5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases3e-1170.9
NC_014727:1537183:1555138155513815565681431Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,5'-nucleotidase/2',3'-cyclic phosphodiesterase related esterase4e-1170.5
NC_014311:198542:2018382018382035531716Ralstonia solanacearum PSI07 chromosome, complete genome5'-nucleotidase4e-1170.5
NC_014206:3355156:3356906335690633592302325Geobacillus sp. C56-T3 chromosome, complete genome5'-nucleotidase domain-containing protein1e-1068.6
NC_020210:3246839:3248199324819932505262328Geobacillus sp. GHH01, complete genometrifunctional nucleotide phosphoesterase protein2e-1068.6
NC_014915:3320768:3337574333757433399012328Geobacillus sp. Y412MC52 chromosome, complete genome5'-Nucleotidase domain-containing protein4e-1067.4
NC_013411:3314799:3331605333160533339322328Geobacillus sp. Y412MC61, complete genome5'-Nucleotidase domain protein4e-1067.4
NC_020210:2969862:2974355297435529763972043Geobacillus sp. GHH01, complete genometrifunctional nucleotide phosphoesterase protein6e-1066.6
NC_015725:743567:7527217527217547632043Mycoplasma bovis Hubei-1 chromosome, complete genome5'nucleotidase5e-1066.6
NC_016593:3249767:3270180327018032725072328Geobacillus thermoleovorans CCB_US3_UF5 chromosome, complete5'-nucleotidase7e-1066.2
NC_014307:233045:2363422363422380631722Ralstonia solanacearum CFBP2957 chromosome, complete genome5'-nucleotidase8e-1066.2
NC_015224:1391088:1415063141506314167151653Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor4e-0963.9
NC_016935:1752001:1752001175200117534581458Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein4e-0963.9
NC_008800:3330944:3332365333236533340171653Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic5e-0963.5
NC_015690:1186545:1186545118654511880021458Paenibacillus mucilaginosus KNP414 chromosome, complete genomeYunD5e-0963.5
NC_014014:117925:1424921424921445432052Mycoplasma crocodyli MP145 chromosome, complete genome5'Nucleotidase5e-0963.5
NC_009443:1996812:1996812199681219992532442Streptococcus suis 98HAH33, complete genomebifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein7e-0962.8
NC_012924:1997052:1997052199705219994932442Streptococcus suis SC84, complete genomebifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein7e-0962.8
NC_012926:2047303:2047303204730320497442442Streptococcus suis BM407 chromosome, complete genomebifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase7e-0962.8
NC_008025:669281:6726826726826746011920Deinococcus geothermalis DSM 11300, complete genome2 ,3 -cyclic-nucleotide 2 -phosphodiesterase1e-0862.4
NC_013889:1202385:1222360122236012240931734Thioalkalivibrio sp. K90mix chromosome, complete genome5'-Nucleotidase domain protein1e-0862
NC_009009:219087:2359142359142383252412Streptococcus sanguinis SK36, complete genomeCyclo-nucleotide phosphodiesterase, putative1e-0862
NC_013173:1259898:1287421128742112888691449Desulfomicrobium baculatum DSM 4028, complete genome5'-Nucleotidase domain protein2e-0861.2
NC_011832:820658:8879038879038896451743Candidatus Methanosphaerula palustris E1-9c, complete genome5'-Nucleotidase domain protein4e-0860.5
NC_014388:55903:6929169291709461656Butyrivibrio proteoclasticus B316 chromosome 2, complete genome5'-nucleotidase domain-containing protein7e-0859.7
NC_004668:2762464:2779614277961427811671554Enterococcus faecalis V583, complete genome2',3'-cyclic-nucleotide 2'-phosphodiesterase, putative2e-0758.2
NC_009443:1445936:1468467146846714704371971Streptococcus suis 98HAH33, complete genome5'-nucleotidase4e-0757
NC_009442:1446508:1468985146898514710152031Streptococcus suis 05ZYH33 chromosome, complete genome5'-nucleotidase4e-0757
NC_009708:3411153:3411153341115334128081656Yersinia pseudotuberculosis IP 31758 chromosome, complete genomebifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic5e-0757
NC_012926:1496510:1519006151900615210302025Streptococcus suis BM407 chromosome, complete genomesurface-anchored 5'-nucleotidase5e-0756.6
NC_012924:1446190:1468667146866714706912025Streptococcus suis SC84, complete genomesurface-anchored 5'-nucleotidase5e-0756.6
NC_008149:1122693:115622611562261157194969Yersinia pestis Nepal516, complete genome5'-nucleotidase/2' 3'-cyclic phosphodiesterase1e-0655.5
NC_008150:2878450:287941028794102880378969Yersinia pestis Antiqua, complete genome5'-nucleotidase/2' 3'-cyclic phosphodiesterase1e-0655.5
NC_009381:3094939:309589930958993096867969Yersinia pestis Pestoides F chromosome, complete genomeprotein ushA :UDP-sugar hydrolase; 5'-nucleotidase1e-0655.5
NC_014029:3501500:350214935021493502940792Yersinia pestis Z176003 chromosome, complete genomeUDP-sugar hydrolase1e-0655.5
NC_017154:3444497:344511434451143445905792Yersinia pestis D106004 chromosome, complete genomeUDP-sugar hydrolase1e-0655.5
NC_017160:3426486:342710334271033427894792Yersinia pestis D182038 chromosome, complete genomeUDP-sugar hydrolase1e-0655.5
NC_017168:2281040:231353023135302314321792Yersinia pestis A1122 chromosome, complete genomeprotein ushA precursor:UDP-sugar hydrolase; 5'-nucleotidase1e-0655.5
NC_020064:3998715:4003038400303840050081971Serratia marcescens FGI94, complete genome2',3'-cyclic-nucleotide 2'-phosphodiesterase3e-0654.3
NC_015953:1581542:1601520160152016033311812Streptomyces sp. SirexAA-E chromosome, complete genome2',3'-cyclic-nucleotide 2'-phosphodiesterase8e-0652.8
NC_009513:1065704:1084663108466310869212259Lactobacillus reuteri F275, complete genomeLPXTG-motif cell wall anchor domain9e-0652.8