Pre_GI: BLASTP Hits

Some Help

Query: NC_009381:588137:591561 Yersinia pestis Pestoides F chromosome, complete genome

Start: 591561, End: 592394, Length: 834

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Atypical strain isolated from the former Soviet Union, USSR. This strain lacks a plasminogen activator and is virulent by the aerosol route. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:809943:813367813367814200834Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein1e-162572
NC_008150:317903:322261322261323094834Yersinia pestis Antiqua, complete genomehypothetical protein1e-162572
NC_005810:3917254:392335739233573924190834Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein1e-162572
NC_014029:961522:964946964946965779834Yersinia pestis Z176003 chromosome, complete genomehypothetical protein1e-162572
NC_017154:902739:907098907098907931834Yersinia pestis D106004 chromosome, complete genomehypothetical protein1e-162572
NC_017160:905783:909207909207910040834Yersinia pestis D182038 chromosome, complete genomehypothetical protein1e-162572
NC_017168:3286:9389938910222834Yersinia pestis A1122 chromosome, complete genomehypothetical protein1e-162572
NC_009708:874770:878195878195879028834Yersinia pseudotuberculosis IP 31758 chromosome, complete genomedioxygenase family protein8e-162569
NC_010465:893921:897347897347898180834Yersinia pseudotuberculosis YPIII, complete genomeintradiol ring-cleavage dioxygenase8e-162569
NC_007404:1260500:126211112621111262869759Thiobacillus denitrificans ATCC 25259, complete genometwin-arginine translocation pathway signal3e-31135
NC_013960:1778411:179555217955521796292741Nitrosococcus halophilus Nc4 chromosome, complete genomeintradiol ring-cleavage dioxygenase1e-29130
NC_011757:5048714:505944850594485060377930Methylobacterium chloromethanicum CM4, complete genomeintradiol ring-cleavage dioxygenase2e-29129
NC_007484:2746078:276235027623502763120771Nitrosococcus oceani ATCC 19707, complete genomeIntradiol ring-cleavage dioxygenase1e-28127
NC_007484:1229899:123119712311971231955759Nitrosococcus oceani ATCC 19707, complete genomeProtocatechuate 3 4-dioxygenase beta subunit like protein7e-28124
NC_009925:1109770:111451511145151115315801Acaryochloris marina MBIC11017, complete genomeDioxygenase subfamily protein2e-23109
NC_011831:2213306:221801022180102218945936Chloroflexus aggregans DSM 9485, complete genomeintradiol ring-cleavage dioxygenase1e-1997.1
NC_009921:5202607:522394052239405224899960Frankia sp. EAN1pec, complete genomeintradiol ring-cleavage dioxygenase2e-1996.7
NC_014623:9552:107301073011692963Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeprotocatechuate 3,4-dioxygenase beta chain1e-1790.5
NC_011886:4336417:436019143601914361117927Arthrobacter chlorophenolicus A6, complete genomeintradiol ring-cleavage dioxygenase7e-1477.8
NC_018524:4988810:501285350128535013449597Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomedioxygenase family protein3e-0755.8