Pre_GI: BLASTP Hits

Some Help

Query: NC_009381:1783886:1824815 Yersinia pestis Pestoides F chromosome, complete genome

Start: 1824815, End: 1826299, Length: 1485

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Atypical strain isolated from the former Soviet Union, USSR. This strain lacks a plasminogen activator and is virulent by the aerosol route. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008149:3251196:3272149327214932736331485Yersinia pestis Nepal516, complete genomepermease0958
NC_004088:3382148:3403208340320834045661359Yersinia pestis KIM, complete genomepermease0866
NC_013850:2624899:2624899262489926263951497Klebsiella variicola At-22 chromosome, complete genomepermease for cytosine/purines uracil thiamine allantoin0753
NC_011283:2627050:2627050262705026285461497Klebsiella pneumoniae 342 chromosome, complete genomepermease, cytosine/purine, uracil, thiamine, allantoin family0752
NC_016514:1627664:1647095164709516485911497Enterobacter cloacae EcWSU1 chromosome, complete genomeallantoin permease0752
NC_015968:1618862:1639779163977916412751497Enterobacter asburiae LF7a chromosome, complete genomepermease for cytosine/purines uracil thiamine allantoin0750
NC_009648:1956070:1972135197213519736311497Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative allantoin permease0746
NC_012731:2693091:2705755270575527072511497Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative allantoin permease0746
NC_016845:2729654:2747899274789927493951497Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative allantoin permease0744
NC_016830:1719407:1740066174006617415201455Pseudomonas fluorescens F113 chromosome, complete genomecytosine/purines uracil thiamine allantoin permease6e-164577
NC_016906:4123000:4137444413744441391021659Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative allantoin permease, nucleobase cation symporter-1 (NCS1) family3e-143508
NC_020210:2133996:2195727219572721972141488Geobacillus sp. GHH01, complete genomeallantoin permease4e-109395
NC_017150:2244950:2273042227304222742651224Acetobacter pasteurianus IFO 3283-01-42C, complete genomeAPC transporter NCS12e-103377
NC_013209:2337204:2365296236529623665191224Acetobacter pasteurianus IFO 3283-01, complete genomeAPC transporter NCS12e-103377
NC_017100:2339826:2367918236791823691411224Acetobacter pasteurianus IFO 3283-03, complete genomeAPC transporter NCS12e-103377
NC_017108:2337163:2365255236525523664781224Acetobacter pasteurianus IFO 3283-12, complete genomeAPC transporter NCS12e-103377
NC_017111:2337181:2365273236527323664961224Acetobacter pasteurianus IFO 3283-32, complete genomeAPC transporter NCS12e-103377
NC_017121:2337168:2365260236526023664831224Acetobacter pasteurianus IFO 3283-07, complete genomeAPC transporter NCS12e-103377
NC_017125:2339806:2367898236789823691211224Acetobacter pasteurianus IFO 3283-22, complete genomeAPC transporter NCS12e-103377
NC_017146:2339848:2367940236794023691631224Acetobacter pasteurianus IFO 3283-26, complete genomeAPC transporter NCS12e-103377
NC_012660:5121219:5121219512121951227481530Pseudomonas fluorescens SBW25 chromosome, complete genomeputative allantoin permease4e-94345
NC_004129:2034500:2056869205686920584101542Pseudomonas fluorescens Pf-5, complete genometransporter, NCS1 nucleoside transporter family3e-92339
NC_021182:1077721:1088364108836410898481485Clostridium pasteurianum BC1, complete genomeNCS1 nucleoside transporter-like protein8e-63241
NC_016582:3763476:3780331378033137818931563Streptomyces bingchenggensis BCW-1 chromosome, complete genomeallantoin permease3e-59229
NC_015563:4383000:4398951439895144004441494Delftia sp. Cs1-4 chromosome, complete genomeNCS1 nucleoside transporter family1e-55217
NC_008752:1025980:1062067106206710635361470Acidovorax avenae subsp. citrulli AAC00-1, complete genomepermease for cytosine/purines, uracil, thiamine, allantoin4e-51202
NC_010125:1051735:1060846106084610623211476Gluconacetobacter diazotrophicus PAl 5, complete genomeputative allantoin permease4e-48192
NC_006510:1446490:1452639145263914541471509Geobacillus kaustophilus HTA426, complete genomehypothetical protein2e-46187
NC_013411:2236166:2242309224230922438171509Geobacillus sp. Y412MC61, complete genomepermease for cytosine/purines uracil thiamine allantoin2e-46187
NC_014915:1376035:1382253138225313837611509Geobacillus sp. Y412MC52 chromosome, complete genomepermease for cytosine/purines uracil thiamine allantoin2e-46187
NC_016593:1527456:1533682153368215351901509Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeNCS1 nucleoside transporter1e-45184
NC_003910:4234000:4267261426726142688081548Colwellia psychrerythraea 34H, complete genometransporter, NCS1 nucleoside family6e-45182
NC_018604:2253539:2275148227514822765721425Brachyspira pilosicoli WesB complete genomeNCS1 nucleoside transporter4e-25116
NC_014160:869873:8885348885348899431410Thermosphaera aggregans DSM 11486 chromosome, complete genomepermease for cytosine/purines uracil thiamine allantoin6e-1995.9
NC_016023:579000:5793505793505807861437Bacillus coagulans 36D1 chromosome, complete genomecytosine/purines uracil thiamine allantoin permease4e-1686.3
NC_016584:5625975:5625975562597556273631389Desulfosporosinus orientis DSM 765 chromosome, complete genomecytosine/purines uracil thiamine allantoin permease4e-1583.2
NC_008525:270310:2831742831742845381365Pediococcus pentosaceus ATCC 25745, complete genomePurine-cytosine permease related protein1e-0758.2
NC_016605:50695:6430564305656781374Pediococcus claussenii ATCC BAA-344 chromosome, complete genomepermease for cytosine/purines, uracil, thiamine, allantoin family protein3e-0757.4
NC_017100:2339826:236768223676822367846165Acetobacter pasteurianus IFO 3283-03, complete genomeAPC transporter NCS16e-0652.8
NC_017108:2337163:236501923650192365183165Acetobacter pasteurianus IFO 3283-12, complete genomeAPC transporter NCS16e-0652.8
NC_017111:2337181:236503723650372365201165Acetobacter pasteurianus IFO 3283-32, complete genomeAPC transporter NCS16e-0652.8
NC_017121:2337168:236502423650242365188165Acetobacter pasteurianus IFO 3283-07, complete genomeAPC transporter NCS16e-0652.8
NC_017125:2339806:236766223676622367826165Acetobacter pasteurianus IFO 3283-22, complete genomeAPC transporter NCS16e-0652.8
NC_017146:2339848:236770423677042367868165Acetobacter pasteurianus IFO 3283-26, complete genomeAPC transporter NCS16e-0652.8
NC_017150:2244950:227280622728062272970165Acetobacter pasteurianus IFO 3283-01-42C, complete genomeAPC transporter NCS16e-0652.8
NC_013209:2337204:236506023650602365224165Acetobacter pasteurianus IFO 3283-01, complete genomeAPC transporter NCS16e-0652.8