Pre_GI: BLASTP Hits

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Query: NC_009378:106193:111435 Yersinia pestis Pestoides F plasmid MT, complete sequence

Start: 111435, End: 112172, Length: 738

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Atypical strain isolated from the former Soviet Union, USSR. This strain lacks a plasminogen activator and is virulent by the aerosol route. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016846:24500:459494594946674726Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS2,type-F conjugative transfer system pilin acetylase TraX2e-49195
NC_007414:56508:903109031091056747Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequenceF pilin acetylase3e-47188
NC_007607:87000:101371101371102117747Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceF pilin acetylation protein6e-47187
NC_017319:192482:203974203974204726753Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceF pilin acetylation protein2e-46186
NC_010660:175200:188255188255189001747Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequencetype IV secretion-like conjugative transfer system pilin acetylase TraX2e-46186
NC_007608:97092:108224108224108970747Shigella boydii Sb227 plasmid pSB4_227, complete sequenceF pilin acetylation protein2e-46186
NC_004851:191709:204097204097204843747Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceF pilin acetylation protein2e-46185
NC_007385:157516:175899175899176646748Shigella sonnei Ss046 plasmid pSS_046, complete sequence3e-30132
NC_013716:4306695:433824643382464338584339Citrobacter rodentium ICC168, complete genome8e-28124
NC_009787:17344:324793247933237759Escherichia coli E24377A plasmid pETEC_35, complete sequencetype-F conjugative transfer system pilin acetylase TraX2e-1582.8
NC_013285:1:152471524715981735Cronobacter turicensis plasmid pCTU3, complete sequencehypothetical protein3e-1582
NC_013722:1785692:179032317903231790991669Xanthomonas albilineans, complete genomeputative f pilin acetylation protein7e-0651.2