Pre_GI: BLASTP Hits

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Query: NC_009092:521519:544821 Shewanella loihica PV-4, complete genome

Start: 544821, End: 545225, Length: 405

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014972:1407632:142032214203221420657336Desulfobulbus propionicus DSM 2032 chromosome, complete genomeArsR family transcriptional regulator5e-23106
NC_008577:2818546:282816328281632828471309Shewanella sp. ANA-3 chromosome 1, complete sequencetranscriptional regulator, ArsR family4e-22103
NC_007519:2773000:277905027790502779382333Desulfovibrio alaskensis G20 chromosome, complete genomeArsR family transcriptional regulator7e-2095.9
NC_013522:1538994:154380215438021544134333Thermanaerovibrio acidaminovorans DSM 6589, complete genometranscriptional regulator, ArsR family4e-1373.2
NC_008751:1736512:174308417430841743428345Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeregulatory protein, ArsR5e-1372.8
NC_002937:1706000:172482917248291725173345Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetranscriptional regulator, ArsR family5e-1372.8
NC_014377:1985714:198979219897921990124333Thermosediminibacter oceani DSM 16646 chromosome, complete genometranscriptional regulator, ArsR family9e-1268.9
NC_011899:2165814:216699921669992167340342Halothermothrix orenii H 168, complete genomeregulatory protein ArsR5e-1063.2
NC_015388:2211828:223330822333082233595288Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeregulatory protein ArsR5e-1062.8
NC_011830:1288984:131316613131661313486321Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, ArsR family1e-0961.6
NC_005071:1064000:107919610791961079525330Prochlorococcus marinus str. MIT 9313, complete genomeBacterial regulatory proteins, ArsR family9e-0958.9
NC_014624:224213:230275230275230568294Eubacterium limosum KIST612 chromosome, complete genometranscriptional regulator1e-0858.5
NC_012881:2405414:241820424182042418548345Desulfovibrio salexigens DSM 2638, complete genometranscriptional regulator, ArsR family1e-0858.2
NC_009338:3029507:302909430290943029510417Mycobacterium gilvum PYR-GCK chromosome, complete genomeregulatory protein ArsR2e-0857.8
NC_021150:4929670:495079749507974951120324Azotobacter vinelandii CA6, complete genomeArsR family regulatory protein2e-0857.8
NC_012560:4929683:495081049508104951133324Azotobacter vinelandii DJ, complete genomeBacterial regulatory protein, ArsR family2e-0857.8
NC_008820:968423:986976986976987254279Prochlorococcus marinus str. MIT 9303, complete genomebacterial regulatory proteins, ArsR family protein2e-0857.8
NC_007907:4714844:472729147272914727599309Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-0856.6
NC_016616:1336000:133618313361831336509327Dechlorosoma suillum PS chromosome, complete genomeputative transcriptional regulator6e-0856.2
NC_016628:935420:946272946272946970699Vibrio furnissii NCTC 11218 chromosome 2, complete sequencetranscriptional regulator1e-0755.1
NC_015519:2580310:258170125817012582009309Tepidanaerobacter sp. Re1 chromosome, complete genomeregulatory protein ArsR2e-0754.7
NC_007907:5185510:522420452242045224521318Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0754.3
NC_007333:1743890:179373217937321794109378Thermobifida fusca YX, complete genomeregulatory protein, ArsR3e-0753.9
NC_016791:3891272:390176439017643902081318Clostridium sp. BNL1100 chromosome, complete genomeputative transcriptional regulator4e-0753.5
NC_009525:2635792:265321426532142653621408Mycobacterium tuberculosis H37Ra, complete genomeArsR family transcriptional regulator5e-0753.1
NC_015848:2684275:269985926998592700266408Mycobacterium canettii CIPT 140010059, complete genomeputative transcriptional regulatory protein5e-0753.1
NC_012943:1769445:177205017720501772457408Mycobacterium tuberculosis KZN 1435 chromosome, complete genometranscriptional regulator, arsR-family5e-0753.1
NC_016768:1769332:177193717719371772344408Mycobacterium tuberculosis KZN 4207 chromosome, complete genomeArsR family transcriptional regulator5e-0753.1
NC_015422:3513689:353075335307533531418666Alicycliphilus denitrificans K601 chromosome, complete genomeRhodanese-like protein5e-0753.1
NC_005042:1422000:143704014370401437351312Prochlorococcus marinus subsp. marinus str. CCMP1375, completeTranscriptional regulator6e-0752.8
NC_010612:4501414:451756645175664517961396Mycobacterium marinum M, complete genometranscriptional regulatory protein (probably ArsR-family)8e-0752.4
NC_013851:3392644:341428834142883414653366Allochromatium vinosum DSM 180 chromosome, complete genometranscriptional regulator, ArsR family8e-0752.4
NC_002947:2157648:217656921765692176955387Pseudomonas putida KT2440, complete genomearsenic resistance transcriptional regulator1e-0652
NC_018524:5066720:507672650767265077079354Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomebacterial regulatory , arsR family protein1e-0652
NC_008789:707916:726020726020726676657Halorhodospira halophila SL1, complete genomeRhodanese domain protein1e-0652
NC_011386:2762886:277622727762272776571345Oligotropha carboxidovorans OM5, complete genomeregulatory protein, ArsR1e-0652
NC_015684:1343251:134785813478581348256399Oligotropha carboxidovorans OM5 chromosome, complete genomeArsR family transcriptional regulator1e-0652
NC_010572:6463939:647460564746056475003399Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative ArsR-family transcriptional regulator2e-0651.6
NC_013947:5546315:556240055624005562693294Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, ArsR family2e-0651.6
NC_013592:2703327:271984927198492720181333Dickeya dadantii Ech586, complete genometranscriptional regulator, ArsR family1e-0651.6
NC_018866:154252:154252154252154554303Dehalobacter sp. DCA chromosome, complete genomeArsenical resistance operon repressor1e-0651.6
NC_007907:4714844:472984247298424730195354Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-0651.6
NC_012912:2800884:281505128150512815383333Dickeya zeae Ech1591, complete genometranscriptional regulator, ArsR family2e-0651.2
NC_008260:2961291:298309829830982983415318Alcanivorax borkumensis SK2, complete genomeTranscriptional regulator, ArsR family, putative2e-0651.2
NC_015690:1967244:198678219867821987126345Paenibacillus mucilaginosus KNP414 chromosome, complete genomeArsR family transcriptional regulator2e-0651.2
NC_016935:2503071:251799925179992518343345Paenibacillus mucilaginosus 3016 chromosome, complete genomeArsR family transcriptional regulator2e-0651.2
NC_010410:3606826:368517136851713685503333Acinetobacter baumannii AYE, complete genomearsenical resistence operon repressor2e-0651.2
NC_011586:268927:274344274344274664321Acinetobacter baumannii AB0057 chromosome, complete genomearsenical resistance operon repressor2e-0651.2
NC_014391:1317957:132134013213401321678339Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeregulatory protein ArsR2e-0651.2
NC_011883:1478173:149284314928431493283441Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,transcriptional regulator, ArsR family2e-0651.2
NC_013131:9976929:998141199814119981782372Catenulispora acidiphila DSM 44928, complete genometranscriptional regulator, ArsR family3e-0650.8
NC_008726:3858209:387404838740483874452405Mycobacterium vanbaalenii PYR-1, complete genomeregulatory protein, ArsR3e-0650.8
NC_013131:9976929:997692999769299977285357Catenulispora acidiphila DSM 44928, complete genometranscriptional regulator, ArsR family3e-0650.8
NC_021177:1736854:176424917642491764662414Streptomyces fulvissimus DSM 40593, complete genomeTranscriptional regulator2e-0650.8
NC_014150:648868:673088673088673456369Brachyspira murdochii DSM 12563 chromosome, complete genometranscriptional regulator, ArsR family3e-0650.4
NC_014165:374674:393843393843394226384Thermobispora bispora DSM 43833 chromosome, complete genomeArsR family transcriptional regulator3e-0650.4
NC_018012:1789028:180465418046541804983330Thiocystis violascens DSM 198 chromosome, complete genomeputative transcriptional regulator3e-0650.4
NC_011830:1288984:130901913090191309372354Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, ArsR family4e-0650.1
NC_015417:39633:474964749647834339Clostridium botulinum BKT015925 plasmid p1BKT015925, completeArsR family transcriptional regulator4e-0650.1
NC_016791:3953972:397954939795493979866318Clostridium sp. BNL1100 chromosome, complete genomeputative transcriptional regulator4e-0650.1
NC_013720:545829:565568565568565882315Pirellula staleyi DSM 6068, complete genometranscriptional regulator, ArsR family4e-0650.1
NC_012803:1519138:152635015263501526724375Micrococcus luteus NCTC 2665, complete genometranscriptional regulator, ArsR family5e-0649.7
NC_018080:6048516:607406660740666074422357Pseudomonas aeruginosa DK2 chromosome, complete genomeArsR family transcriptional regulator5e-0649.7
NC_019897:3669888:369225736922573692586330Thermobacillus composti KWC4 chromosome, complete genometranscriptional regulator7e-0649.3
NC_010943:2422838:245046024504602450807348Stenotrophomonas maltophilia K279a, complete genomeputative transcriptional regulatory protein7e-0649.3
NC_016887:1680338:169785716978571698207351Nocardia cyriacigeorgica GUH-2, complete genomeputative transcriptional regulator8e-0648.9
NC_007907:5185510:525847652584765258850375Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-0548.9