Pre_GI: BLASTP Hits

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Query: NC_009092:4337617:4366486 Shewanella loihica PV-4, complete genome

Start: 4366486, End: 4367391, Length: 906

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019940:389979:405806405806406711906Thioflavicoccus mobilis 8321 chromosome, complete genomealpha-L-glutamate ligase6e-131467
NC_005773:5684000:568441456844145685319906Pseudomonas syringae pv. phaseolicola 1448A, complete genomeribosomal protein S6 modification protein2e-124444
NC_002971:1545924:154742315474231548328906Coxiella burnetii RSA 493, complete genomeribosomal protein S6 modification protein3e-120431
NC_009727:357206:372388372388373293906Coxiella burnetii Dugway 7E9-12, complete genomeribosomal protein S6 modification protein3e-120431
NC_011528:1769349:177075917707591771664906Coxiella burnetii CbuK_Q154, complete genomeribosomal protein S6 modification protein3e-120431
NC_010117:1633447:163480516348051635710906Coxiella burnetii RSA 331, complete genomeribosomal protein S6 modification protein3e-120431
NC_011729:4073761:409049240904924091397906Cyanothece sp. PCC 7424 chromosome, complete genomeRimK family alpha-L-glutamate ligase1e-116419
NC_010995:1459831:146181414618141462719906Cellvibrio japonicus Ueda107, complete genomeribosomal protein S6 modification protein4e-115414
NC_010546:2711929:271313627131362714065930Cyanothece sp. ATCC 51142 chromosome circular, complete sequenceputative S6 modification enzyme2e-113409
NC_010296:1081728:110213011021301103035906Microcystis aeruginosa NIES-843, complete genomeribosomal protein S6 modification protein6e-113407
NC_016612:3361802:337741033774103378312903Klebsiella oxytoca KCTC 1686 chromosome, complete genomeribosomal protein S6 modification protein3e-106384
NC_015638:923660:940134940134941009876Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeRimK family alpha-L-glutamate ligase5e-99360
NC_013037:3994083:401298740129874013889903Dyadobacter fermentans DSM 18053, complete genomealpha-L-glutamate ligase, RimK family6e-94344
NC_013222:432947:4329474329474343201374Robiginitalea biformata HTCC2501, complete genomepossible ribosomal protein S6 modification protein1e-93343
NC_009850:2169459:218813821881382189067930Arcobacter butzleri RM4018, complete genomeribosomal protein S6 modification protein4e-93341
NC_010688:1192410:123846512384651239370906Xanthomonas campestris pv. campestris, complete genomeribosomal protein S6 modification protein1e-91336
NC_017271:3641705:365951636595163660505990Xanthomonas campestris pv. raphani 756C chromosome, completeribosomal protein S6 modification protein2e-91335
NC_011071:3544450:356585935658593566737879Stenotrophomonas maltophilia R551-3, complete genomealpha-L-glutamate ligase, RimK family6e-91334
NC_017267:3612682:363560636356063636523918Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completeribosomal protein S6 modification protein1e-90333
NC_003902:3666544:368200436820043682879876Xanthomonas campestris pv. campestris str. ATCC 33913, completeribosomal protein S6 modification protein1e-90333
NC_007086:1224867:126398712639871264862876Xanthomonas campestris pv. campestris str. 8004, complete genomeribosomal protein S6 modification protein1e-90333
NC_007508:3835000:385499138549913855878888Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeribosomal protein S6 modification protein2e-90332
NC_020064:1611820:162937616293761630263888Serratia marcescens FGI94, complete genomealpha-L-glutamate ligase, RimK family5e-87320
NC_012803:2454380:2469896246989624711311236Micrococcus luteus NCTC 2665, complete genomeSSU ribosomal protein S6P modification protein5e-85314
NC_016147:730810:750965750965751873909Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeribosomal protein S6 modification protein5e-85314
NC_003919:3812778:383309938330993833845747Xanthomonas axonopodis pv. citri str. 306, complete genomeribosomal protein S6 modification protein3e-75281
NC_009053:553298:553298553298554212915Actinobacillus pleuropneumoniae L20, complete genomeribosomal protein S6 modification protein2e-60233
NC_009675:2515669:253284225328422533816975Anaeromyxobacter sp. Fw109-5 chromosome, complete genomealpha-L-glutamate ligase1e-58226
NC_007760:1806136:181165518116551812596942Anaeromyxobacter dehalogenans 2CP-C, complete genomeS6 modification enzyme RimK2e-57223
NC_011145:2543321:256312825631282564069942Anaeromyxobacter sp. K, complete genomealpha-L-glutamate ligase, RimK family9e-58223
NC_011891:2607812:262724726272472628188942Anaeromyxobacter dehalogenans 2CP-1, complete genomealpha-L-glutamate ligase, RimK family3e-57222
NC_020126:4430142:4433623443362344346271005Myxococcus stipitatus DSM 14675, complete genomealpha-L-glutamate ligase4e-53208
NC_017030:6252756:626869362686936269670978Corallococcus coralloides DSM 2259 chromosome, complete genomealpha-L-glutamate ligase4e-53208
NC_015711:5479879:548484554848455485762918Myxococcus fulvus HW-1 chromosome, complete genomealpha-L-glutamate ligase1e-43177
NC_014471:1269571:129717812971781298077900Ignisphaera aggregans DSM 17230 chromosome, complete genomealpha-L-glutamate ligase, RimK family7e-25114
NC_013851:3166969:3188785318878531913402556Allochromatium vinosum DSM 180 chromosome, complete genomealpha-L-glutamate ligase, RimK family3e-24112
NC_015151:665346:684990684990685892903Vulcanisaeta moutnovskia 768-28 chromosome, complete genomealpha-L-glutamate ligase, RimK family2e-21103
NC_013769:123958:126476126476127303828Sulfolobus islandicus L.D.8.5 chromosome, complete genomealpha-L-glutamate ligase4e-21102
NC_012726:115500:138248138248139075828Sulfolobus islandicus M.16.4 chromosome, complete genomealpha-L-glutamate ligase7e-21101
NC_009776:1249350:126449612644961265353858Ignicoccus hospitalis KIN4/I, complete genomelysine biosynthesis enzyme LysX2e-2099.8
NC_015518:997707:100165710016571002457801Acidianus hospitalis W1 chromosome, complete genomelysine biosynthesis enzyme LysX3e-1995.9
NC_013202:606204:611283611283612149867Halomicrobium mukohataei DSM 12286, complete genomeRimK domain protein ATP-grasp2e-1893.2
NC_009440:1908864:192775319277531928598846Metallosphaera sedula DSM 5348 chromosome, complete genomeL-2-aminoadipate N-acetyltransferase3e-1892.4
NC_015435:251958:258011258011258856846Metallosphaera cuprina Ar-4 chromosome, complete genomeL-2-aminoadipate N-acetyltransferase5e-1788.6
NC_015562:627000:643084643084643905822Methanotorris igneus Kol 5 chromosome, complete genomealpha-L-glutamate ligase, RimK family7e-1788.2
NC_012623:1167289:118664511866451187493849Sulfolobus islandicus Y.N.15.51 chromosome, complete genomelysine biosynthesis protein LysX8e-1787.8
NC_002754:537792:559125559125559973849Sulfolobus solfataricus P2, complete genomeRibosomal protein S6 modification protein (rimK-2)9e-1787.8
NC_015948:1636491:1649135164913516504871353Haloarcula hispanica ATCC 33960 chromosome chromosome I, completeRimK family alpha-L-glutamate ligase/30S ribosomal protein S6 modification protein6e-1685.1
NC_014761:1795304:179760017976001798466867Oceanithermus profundus DSM 14977 chromosome, complete genomel-2-aminoadipate n-acetyltransferase9e-1684.3
NC_003106:1484768:150403715040371504885849Sulfolobus tokodaii str. 7, complete genomehypothetical ribosomal protein S6 modification protein3e-1582.8
NC_014960:1380500:140240914024091403359951Anaerolinea thermophila UNI-1, complete genomelysine biosynthesis protein LysX3e-1582.8
NC_015518:761380:810079810079810930852Acidianus hospitalis W1 chromosome, complete genomelysine biosynthesis enzyme LysX4e-1582.4
NC_007181:1364522:138460213846021385450849Sulfolobus acidocaldarius DSM 639, complete genomeconserved ribosomal protein S66e-1581.6
NC_015435:1713051:173369417336941734554861Metallosphaera cuprina Ar-4 chromosome, complete genomeL-2-aminoadipate N-acetyltransferase9e-1580.9
NC_015954:463500:480017480017480883867Halophilic archaeon DL31 chromosome, complete genomelysine biosynthesis enzyme LysX2e-1480.5
NC_013156:182896:204352204352205227876Methanocaldococcus fervens AG86, complete genomealpha-L-glutamate ligase, RimK family2e-1480.1
NC_014820:71565:9947099470100318849Cenarchaeum symbiosum A, complete genomeglutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase)3e-1479.3
NC_010085:1174917:117940811794081180265858Nitrosopumilus maritimus SCM1, complete genomelysine biosynthesis enzyme LysX3e-1479.3
NC_002607:81452:829328293283789858Halobacterium sp. NRC-1, complete genomeRimK4e-1375.5
NC_010175:398453:423655423655424503849Chloroflexus aurantiacus J-10-fl, complete genomelysine biosynthesis enzyme LysX8e-1374.7
NC_013967:2641433:2642590264259026439511362Haloferax volcanii DS2 chromosome, complete genomehypothetical protein7e-1374.7
NC_002754:105256:132570132570133430861Sulfolobus solfataricus P2, complete genomeRibosomal protein S6 modification protein (rimK-1)1e-1273.9
NC_008942:1198000:119858111985811199384804Methanocorpusculum labreanum Z, complete genomehypothetical protein2e-1273.2
NC_020388:1100759:113980811398081140674867Natronomonas moolapensis 8.8.11 complete genomeRimK family protein3e-1272.4
NC_014729:1185294:1188235118823511895931359Halogeometricum borinquense DSM 11551 chromosome, complete genomealpha-l-glutamate ligase, rimk family5e-1272
NC_012589:1917421:194756419475641948415852Sulfolobus islandicus L.S.2.15, complete genomelysine biosynthesis enzyme LysX8e-1271.2
NC_012622:1859149:188578318857831886634852Sulfolobus islandicus Y.G.57.14 chromosome, complete genomelysine biosynthesis protein LysX8e-1271.2
NC_012726:1792344:181974318197431820594852Sulfolobus islandicus M.16.4 chromosome, complete genomelysine biosynthesis protein LysX8e-1271.2
NC_013769:1908164:193479919347991935650852Sulfolobus islandicus L.D.8.5 chromosome, complete genomelysine biosynthesis protein LysX8e-1271.2
NC_012623:733638:739081739081739932852Sulfolobus islandicus Y.N.15.51 chromosome, complete genomelysine biosynthesis protein LysX1e-1170.9
NC_012588:1788084:181548318154831816334852Sulfolobus islandicus M.14.25 chromosome, complete genomelysine biosynthesis protein LysX1e-1170.9
NC_014122:685701:687250687250688110861Methanocaldococcus infernus ME chromosome, complete genomeRimK domain protein ATP-grasp1e-1170.5
NC_010085:1174917:118519211851921186034843Nitrosopumilus maritimus SCM1, complete genomelysine biosynthesis enzyme LysX2e-1170.1
NC_015379:2751342:2762266276226627638521587Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein2e-1170.1
NC_000961:1481685:151127115112711512092822Pyrococcus horikoshii OT3, complete genomeribosomal protein S6 modification protein2e-1170.1
NC_007492:2994036:2995232299523229968061575Pseudomonas fluorescens PfO-1, complete genomehypothetical protein4e-1168.9
NC_000868:416958:423603423603424424822Pyrococcus abyssi GE5, complete genomeribosomal protein s6 modification protein.6e-1168.6
NC_016812:4246542:424884742488474249794948Sinorhizobium fredii HH103, complete genomeglutathione synthetase9e-1167.8
NC_003413:214120:225439225439226260822Pyrococcus furiosus DSM 3638, complete genomeribosomal protein s6 modification protein1e-1067.4
NC_015474:252390:284388284388285209822Pyrococcus sp. NA2 chromosome, complete genomeribosomal protein S6 modification protein5e-1065.1
NC_009465:29735:526285262853590963Candidatus Vesicomyosocius okutanii HA, complete genomeglutathione synthetase1e-0963.9
NC_008463:3503576:3505040350504035065271488Pseudomonas aeruginosa UCBPP-PA14, complete genomeribosomal protein S6 modification enzyme7e-0961.6
NC_002516:2113186:2127684212768421291711488Pseudomonas aeruginosa PAO1, complete genomehypothetical protein7e-0961.6
NC_018080:3448392:3449856344985634513431488Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein7e-0961.6
NC_011901:2833317:283361028336102834401792Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeRimK domain-containing protein3e-0859.7
NC_013016:1441424:146261014626101463566957Neisseria meningitidis alpha14 chromosome, complete genomeglutathione synthetase3e-0859.7
NC_014623:659422:667277667277668242966Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein9e-0857.8
NC_011770:3735162:3736626373662637381131488Pseudomonas aeruginosa LESB58, complete genomeribosomal protein S6 modification enzyme2e-0757
NC_005125:4557889:4559234455923445618642631Gloeobacter violaceus PCC 7421, complete genomecyanophycin synthetase6e-0755.1
NC_014664:3003633:300410130041013005072972Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeRimK domain protein ATP-grasp7e-0754.7
NC_004557:691944:700107700107701012906Clostridium tetani E88, complete genomeD-alanylalanine synthetase1e-0653.9
NC_003919:3812778:383295938329593833117159Xanthomonas axonopodis pv. citri str. 306, complete genomeribosomal protein S6 modification protein1e-0653.9
NC_004578:212468:224484224484225383900Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein2e-0653.5
NC_010475:1161000:118088211808821181841960Synechococcus sp. PCC 7002, complete genomeglutathione synthase6e-0652