Pre_GI: BLASTP Hits

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Query: NC_009092:1263964:1278887 Shewanella loihica PV-4, complete genome

Start: 1278887, End: 1279399, Length: 513

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008700:1115436:112831211283121128824513Shewanella amazonensis SB2B, complete genometype IV pilus biogenesis protein, putative5e-79293
NC_004347:3670145:367471936747193675231513Shewanella oneidensis MR-1, complete genometype IV pilus biogenesis protein, putative6e-57219
NC_009665:1332751:134562213456221346134513Shewanella baltica OS185 chromosome, complete genometype IV pilus biogenesis protein9e-57219
NC_016901:1367443:138194013819401382452513Shewanella baltica OS678 chromosome, complete genometype IV pilus biogenesis protein, putative1e-56218
NC_009997:1368471:138134313813431381855513Shewanella baltica OS195, complete genometype IV pilus biogenesis protein, putative1e-56218
NC_011663:3818886:382629838262983826810513Shewanella baltica OS223 chromosome, complete genometype IV pilus biogenesis protein1e-56218
NC_008577:3738758:375115337511533751665513Shewanella sp. ANA-3 chromosome 1, complete sequencemethylation site containing protein2e-53207
NC_008321:3512471:352096535209653521477513Shewanella sp. MR-4, complete genomemethylation site containing protein4e-52203
NC_008322:3585601:359178735917873592299513Shewanella sp. MR-7, complete genomemethylation site containing protein4e-52203
NC_009901:1309724:132278513227851323297513Shewanella pealeana ATCC 700345, complete genometype IV pilus biogenesis protein, putative2e-50197
NC_009052:1211989:122894412289441229399456Shewanella baltica OS155, complete genometype IV pilus biogenesis protein, putative6e-41166
NC_009901:1309724:132208613220861322622537Shewanella pealeana ATCC 700345, complete genometype IV pilus biogenesis protein, putative2e-37154
NC_004347:3670145:367551736755173676011495Shewanella oneidensis MR-1, complete genometype IV pilus biogenesis protein, putative2e-25115
NC_009092:1263964:127825912782591278750492Shewanella loihica PV-4, complete genomemethylation site containing protein2e-25115
NC_011663:3818886:382695938269593827453495Shewanella baltica OS223 chromosome, complete genometype IV pilus biogenesis protein3e-25114
NC_009665:1332751:134498013449801345474495Shewanella baltica OS185 chromosome, complete genometype IV pilus biogenesis protein3e-25114
NC_009052:1211989:122584312258431226337495Shewanella baltica OS155, complete genometype IV pilus biogenesis protein, putative3e-25114
NC_009997:1368471:138070013807001381194495Shewanella baltica OS195, complete genometype IV pilus biogenesis protein, putative8e-25112
NC_016901:1367443:138129713812971381791495Shewanella baltica OS678 chromosome, complete genometype IV pilus biogenesis protein, putative8e-25112
NC_008700:1115436:112770311277031128194492Shewanella amazonensis SB2B, complete genomemethylation site containing protein4e-24110
NC_008321:3512471:352163235216323522114483Shewanella sp. MR-4, complete genomemethylation site containing protein5e-21100
NC_008577:3738758:375181937518193752301483Shewanella sp. ANA-3 chromosome 1, complete sequencemethylation site containing protein6e-21100
NC_007645:6049340:605699360569936057526534Hahella chejuensis KCTC 2396, complete genomeTfp pilus assembly protein FimT3e-2097.8
NC_008322:3585601:359245435924543592921468Shewanella sp. MR-7, complete genomemethylation site containing protein3e-2097.4
NC_014924:936158:949900949900950445546Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeputative type IV pilus assembly protein fimt4e-2097.4
NC_016147:2471451:247381424738142474377564Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehypothetical protein6e-1786.7
NC_013851:3392644:340187334018733402376504Allochromatium vinosum DSM 180 chromosome, complete genomefimbrial pilin related signal peptide protein9e-1579.7
NC_016147:2471451:247480224748022475335534Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative type IV pilus assembly protein FimT4e-1373.9
NC_008740:979830:991860991860992432573Marinobacter aquaeolei VT8, complete genomeTfp pilus assembly protein FimT6e-1373.6
NC_015424:3890293:389746038974603897987528Aeromonas veronii B565 chromosome, complete genomePrepilin-type cleavage/methylation-like protein8e-1373.2
NC_006834:3422985:342934234293423429884543Xanthomonas oryzae pv. oryzae KACC10331, complete genomefimbrial biogenesis protein9e-1372.8
NC_010688:1908012:192526019252601925811552Xanthomonas campestris pv. campestris, complete genomePutative type IV pilus assembly protein FimT5e-1270.5
NC_007086:1936505:195252419525241953075552Xanthomonas campestris pv. campestris str. 8004, complete genomefimbrial biogenesis protein7e-1270.1
NC_003902:2933121:295714429571442957695552Xanthomonas campestris pv. campestris str. ATCC 33913, completefimbrial biogenesis protein7e-1270.1
NC_008782:3361850:336604633660463366630585Acidovorax sp. JS42, complete genomeputative type-4 fimbrial pilin related signal peptide protein9e-1269.7
NC_015556:4118304:412504841250484125566519Pseudomonas fulva 12-X chromosome, complete genomehypothetical protein1e-1168.9
NC_010002:5752363:575236357523635752926564Delftia acidovorans SPH-1, complete genomeputative type-4 fimbrial pilin related signal peptide protein2e-1168.9
NC_015563:1595500:161451316145131615076564Delftia sp. Cs1-4 chromosome, complete genomehypothetical protein2e-1168.6
NC_003919:3060484:309325030932503093777528Xanthomonas axonopodis pv. citri str. 306, complete genomefimbrial biogenesis protein1e-1065.9
NC_007508:3183631:320101932010193201561543Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative type IV pilus assembly protein FimT1e-1065.5
NC_010995:3821327:383783638378363838366531Cellvibrio japonicus Ueda107, complete genomepre-pilin like leader sequence2e-1065.1
NC_010688:1908012:191838919183891918958570Xanthomonas campestris pv. campestris, complete genomeputative pilus assambly protein3e-1064.3
NC_015563:1595500:160858816085881609175588Delftia sp. Cs1-4 chromosome, complete genomeN-terminal methylation site-containing protein4e-1063.9
NC_008740:979830:984867984867985451585Marinobacter aquaeolei VT8, complete genomeputative type-4 fimbrial pilin related signal peptide protein4e-1063.9
NC_003919:3113343:312715131271513127723573Xanthomonas axonopodis pv. citri str. 306, complete genomepre-pilin like leader sequence8e-1063.2
NC_014153:436082:439936439936440541606Thiomonas intermedia K12 chromosome, complete genomeputative type-4 fimbrial pilin related signal peptide protein8e-1063.2
NC_007508:3183631:320934132093413209859519Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative type IV pilus assembly protein FimT1e-0962.8
NC_009434:1068281:108007110800711080565495Pseudomonas stutzeri A1501, complete genometype 4 fimbrial biogenesis protein FimT2e-0962
NC_013446:1173377:118587411858741186377504Comamonas testosteroni CNB-2, complete genomeprepilin-type cleavage/methylation3e-0961.2
NC_015424:3890293:389684338968433897361519Aeromonas veronii B565 chromosome, complete genomeputative type IV pilus biogenesis protein3e-0961.2
NC_013889:216829:223007223007223531525Thioalkalivibrio sp. K90mix chromosome, complete genomehypothetical protein3e-0960.8
NC_014931:6415940:642725664272566427909654Variovorax paradoxus EPS chromosome, complete genomehypothetical protein4e-0960.5
NC_014311:2733897:274788627478862748497612Ralstonia solanacearum PSI07 chromosome, complete genometype IV pilus assembly protein FimT5e-0960.5
NC_014972:2328228:236249023624902363020531Desulfobulbus propionicus DSM 2032 chromosome, complete genomepilin assembly protein8e-0959.7
NC_018080:5192264:519901351990135199513501Pseudomonas aeruginosa DK2 chromosome, complete genometype 4 fimbrial biogenesis protein FimT2e-0858.5
NC_011901:3363500:337896333789633379478516Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completefimbrial pilin related signal peptide protein2e-0858.5
NC_007645:6049340:606458060645806065065486Hahella chejuensis KCTC 2396, complete genomeTfp pilus assembly protein FimT3e-0858.2
NC_013889:216829:222396222396222914519Thioalkalivibrio sp. K90mix chromosome, complete genomepre-pilin like leader sequence2e-0858.2
NC_009052:1211989:122649012264901226603114Shewanella baltica OS155, complete genome8e-0856.6
NC_008463:5364428:537069253706925371180489Pseudomonas aeruginosa UCBPP-PA14, complete genometype 4 fimbrial biogenesis protein FimU1e-0756.2
NC_018080:5192264:519949851994985200124627Pseudomonas aeruginosa DK2 chromosome, complete genometype 4 fimbrial biogenesis protein FimU1e-0755.8
NC_015556:4118304:412566741256674126140474Pseudomonas fulva 12-X chromosome, complete genomehypothetical protein1e-0755.8
NC_012856:737170:745870745870746514645Ralstonia pickettii 12D chromosome 1, complete genomeTfp pilus assembly protein FimT-like protein1e-0755.8
NC_008782:3361850:336548133654813366008528Acidovorax sp. JS42, complete genomeN-terminal methylation site2e-0755.5
NC_015138:3927411:393113139311313931781651Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completegeneral secretion pathway, GspH3e-0754.7
NC_010682:701912:709385709385710029645Ralstonia pickettii 12J chromosome 1, complete sequenceTfp pilus assembly protein FimT-like protein5e-0753.9
NC_008752:3902637:392051039205103921115606Acidovorax avenae subsp. citrulli AAC00-1, complete genomeTfp pilus assembly protein FimT4e-0753.9
NC_015424:3520783:357348935734893573908420Aeromonas veronii B565 chromosome, complete genomemethylation site containing protein6e-0753.5
NC_010002:5752363:575812757581275758693567Delftia acidovorans SPH-1, complete genomeN-terminal methylation site-containing protein8e-0753.1
NC_008781:3056407:306411630641163064682567Polaromonas naphthalenivorans CJ2, complete genomepilus assembly protein8e-0753.1
NC_008340:277223:286695286695287201507Alkalilimnicola ehrlichei MLHE-1, complete genomeputative type-4 fimbrial pilin related signal peptide protein1e-0652.8
NC_020829:4246847:425187142518714252371501Pseudomonas denitrificans ATCC 13867, complete genomemethylation1e-0652.4
NC_018012:2327376:233441323344132335084672Thiocystis violascens DSM 198 chromosome, complete genomeprepilin-type N-terminal cleavage/methylation domain-containing protein1e-0652.4
NC_008260:497855:503975503975504463489Alcanivorax borkumensis SK2, complete genomepilus biogenesis protein9e-0649.7