Pre_GI: BLASTP Hits

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Query: NC_009092:1263964:1273979 Shewanella loihica PV-4, complete genome

Start: 1273979, End: 1277527, Length: 3549

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008321:3512471:3522891352289135264243534Shewanella sp. MR-4, complete genometype IV pilin biogenesis protein, putative01711
NC_004347:3670145:3678173367817336816793507Shewanella oneidensis MR-1, complete genometype IV pilin biogenesis protein, putative01033
NC_009665:1332751:1340673134067313441823510Shewanella baltica OS185 chromosome, complete genometype IV pilin biogenesis protein01016
NC_009052:1211989:1221539122153912250453507Shewanella baltica OS155, complete genometype IV pilin biogenesis protein, putative01015
NC_011663:3818886:3828251382825138317573507Shewanella baltica OS223 chromosome, complete genometype IV pilin biogenesis protein01014
NC_009997:1368471:1376396137639613799023507Shewanella baltica OS195, complete genometype IV pilin biogenesis protein, putative01013
NC_016901:1367443:1376993137699313804993507Shewanella baltica OS678 chromosome, complete genometype IV pilin biogenesis protein, putative01013
NC_008577:3738758:3753033375303337565393507Shewanella sp. ANA-3 chromosome 1, complete sequencetype IV pilin biogenesis protein, putative01004
NC_009901:1309724:1317754131775413213383585Shewanella pealeana ATCC 700345, complete genometype IV pilin biogenesis protein, putative0833
NC_008700:1115436:1123322112332211269273606Shewanella amazonensis SB2B, complete genometype IV pilin biogenesis protein, putative0816
NC_008322:3585601:3593656359365635973063651Shewanella sp. MR-7, complete genometype IV pilin biogenesis protein, putative0691
NC_015424:3890293:3898293389829339019373645Aeromonas veronii B565 chromosome, complete genomeTapY11e-153545
NC_008740:979830:9882229882229913923171Marinobacter aquaeolei VT8, complete genomeTfp pilus assembly protein tip-associated adhesin PilY1-like5e-72273
NC_008260:497855:5062525062525092813030Alcanivorax borkumensis SK2, complete genomepilin biogenesis related protein2e-56221
NC_013851:3392644:3404243340424334074223180Allochromatium vinosum DSM 180 chromosome, complete genomePyrrolo-quinoline quinone3e-47191
NC_020829:4246847:4252381425238142554283048Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein2e-36155
NC_008702:2378890:2383583238358323869573375Azoarcus sp. BH72, complete genomeputative type 4 pilus biogenesis protein6e-30134
NC_007298:3271071:3278079327807932827134635Dechloromonas aromatica RCB, complete genomeputative Tfp pilus assembly protein tip-associated adhesin PilY11e-25119
NC_008463:5364428:5373154537315453766303477Pseudomonas aeruginosa UCBPP-PA14, complete genometype 4 fimbrial biogenesis protein PilY13e-1895.1
NC_018080:5192264:5202098520209852055743477Pseudomonas aeruginosa DK2 chromosome, complete genometype 4 fimbrial biogenesis protein PilY16e-1894
NC_015740:926920:9323809323809348902511Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeTfp pilus assembly protein tip-associated adhesin PilY1-like protein1e-1689.4
NC_009434:1068281:1074033107403310774253393Pseudomonas stutzeri A1501, complete genometype 4 fimbrial biogenesis protein PilY13e-1688.6
NC_013889:216829:2168292168292203533525Thioalkalivibrio sp. K90mix chromosome, complete genomeNeisseria PilC domain protein7e-1584
NC_003919:3113343:3121739312173931250863348Xanthomonas axonopodis pv. citri str. 306, complete genomePilY1 protein3e-1482
NC_010682:701912:7121347121347155023369Ralstonia pickettii 12J chromosome 1, complete sequenceTfp pilus assembly protein tip-associated adhesin PilY1-like protein6e-1480.9
NC_015410:1144272:1149634114963411529663333Pseudomonas mendocina NK-01 chromosome, complete genomeputative type IV fimbrial biogenesis protein PilY16e-1480.9
NC_015856:4203301:4212245421224542157543510Collimonas fungivorans Ter331 chromosome, complete genometype 4 fimbrial biogenesis protein PilY17e-1480.5
NC_009439:1075170:1081518108151810852013684Pseudomonas mendocina ymp, complete genomeTfp pilus assembly protein tip-associated adhesin PilY1-like protein1e-1379.7
NC_012856:737170:7486167486167519843369Ralstonia pickettii 12D chromosome 1, complete genomeTfp pilus assembly protein tip-associated adhesin PilY1-like protein1e-1379.7
NC_014924:936158:9449289449289491274200Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeputative Tfp pilus assembly protein1e-1379.7
NC_015556:4118304:4128157412815741319663810Pseudomonas fulva 12-X chromosome, complete genomeNeisseria PilC domain protein7e-1377.4
NC_010688:1908012:1920973192097319246743702Xanthomonas campestris pv. campestris, complete genomeputative Tfp pilus assembly protein2e-1172
NC_010995:3821327:3830476383047638349244449Cellvibrio japonicus Ueda107, complete genomeputative fimbrial protein6e-1067.4
NC_002488:1157684:1173720117372011773733654Xylella fastidiosa 9a5c, complete genomePilY1 gene product2e-0965.5
NC_008781:3056407:3066903306690330703493447Polaromonas naphthalenivorans CJ2, complete genometype 4 fimbrial biogenesis protein PilY16e-0964.3
NC_007645:6049340:6058012605801260623284317Hahella chejuensis KCTC 2396, complete genomeTfp pilus assembly protein, tip-associated adhesin PilY11e-0862.8
NC_017271:2935643:2979052297905229827953744Xanthomonas campestris pv. raphani 756C chromosome, completePilY1 protein4e-0861.2
NC_010814:2275199:2300674230067423057345061Geobacter lovleyi SZ, complete genomeTfp pilus assembly protein tip-associated adhesin PilY1-like protein2e-0759.3
NC_018012:2327376:2337138233713823414604323Thiocystis violascens DSM 198 chromosome, complete genomeTfp pilus assembly protein, tip-associated adhesin PilY15e-0757.8
NC_010162:2717741:2735800273580027378992100Sorangium cellulosum 'So ce 56', complete genomeputative pilin biogenesis protein1e-0656.6
NC_012791:5496175:5500067550006755037233657Variovorax paradoxus S110 chromosome 1, complete genomeTfp pilus assembly protein tip-associated adhesin PilY1-like protein6e-0654.3