Pre_GI: BLASTP Hits

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Query: NC_008593:1103293:1117072 Clostridium novyi NT, complete genome

Start: 1117072, End: 1117473, Length: 402

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010674:858397:865813865813866202390Clostridium botulinum B str. Eklund 17B, complete genomeflagellar operon protein9e-29125
NC_010723:833870:844131844131844520390Clostridium botulinum E3 str. Alaska E43, complete genomeflagellar operon protein9e-29125
NC_021182:2883716:290330429033042903693390Clostridium pasteurianum BC1, complete genomeflagellar operon protein1e-26118
NC_014328:1135854:113999311399931140397405Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative flagellar hook associated protein3e-26117
NC_009617:4911595:491929149192914919689399Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeflagellar operon protein3e-25113
NC_020291:4903981:493020949302094930607399Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar operon protein Flg3e-25113
NC_009698:2649453:265646126564612656880420Clostridium botulinum A str. Hall chromosome, complete genomeflagellar operon protein4e-24109
NC_009697:2714668:271953427195342719953420Clostridium botulinum A str. ATCC 19397 chromosome, completeflagellar operon protein4e-24109
NC_010520:2860960:286796928679692868388420Clostridium botulinum A3 str. Loch Maree, complete genomeflagellar operon protein4e-24109
NC_010718:1454087:147097614709761471371396Natranaerobius thermophilus JW/NM-WN-LF, complete genomeflagellar operon protein1e-1685.1
NC_009012:574145:588127588127588516390Clostridium thermocellum ATCC 27405, complete genomeflagellar operon protein1e-1685.1
NC_018664:1663324:167686016768601677255396Clostridium acidurici 9a chromosome, complete genomeflagellar operon protein4e-1683.6
NC_015391:2059191:208186720818672082247381Carnobacterium sp. 17-4 chromosome, complete genomehypothetical protein4e-1683.2
NC_009633:2725128:273097627309762731365390Alkaliphilus metalliredigens QYMF chromosome, complete genomeflagellar operon protein7e-1682.4
NC_009253:2615777:262264226226422622863222Desulfotomaculum reducens MI-1 chromosome, complete genomeflagellar operon protein1e-1478.2
NC_014377:1060000:108108110810811081470390Thermosediminibacter oceani DSM 16646 chromosome, complete genomeflagellar operon protein5e-1476.6
NC_019978:625476:639136639136639504369Halobacteroides halobius DSM 5150, complete genomeflagellar operon protein1e-1271.6
NC_020134:586840:600864600864601244381Clostridium stercorarium subsp. stercorarium DSM 8532, completeflagellar operon protein2e-1271.2
NC_016894:2931213:294363429436342944041408Acetobacterium woodii DSM 1030 chromosome, complete genomeflagellar operon protein9e-0958.9
NC_014652:628435:644147644147644506360Caldicellulosiruptor hydrothermalis 108 chromosome, completeflagellar operon protein1e-0858.5