Pre_GI: BLASTP Hits

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Query: NC_008593:1103293:1108434 Clostridium novyi NT, complete genome

Start: 1108434, End: 1108838, Length: 405

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017297:2854934:286331928633192863720402Clostridium botulinum F str. 230613 chromosome, complete genomeflagellar basal-body rod protein FlgB2e-26117
NC_009698:2649453:266524726652472665648402Clostridium botulinum A str. Hall chromosome, complete genomeflagellar basal-body rod protein FlgB2e-26117
NC_009697:2714668:272832027283202728721402Clostridium botulinum A str. ATCC 19397 chromosome, completeflagellar basal body rod protein FlgB2e-26117
NC_010520:2860960:287676828767682877169402Clostridium botulinum A3 str. Loch Maree, complete genomeflagellar basal-body rod protein FlgB7e-26115
NC_020291:4903981:493959649395964939994399Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar basal body rod protein FlgB2e-1787.4
NC_010723:833870:835500835500835901402Clostridium botulinum E3 str. Alaska E43, complete genomeflagellar basal-body rod protein FlgB2e-1684.7
NC_009253:2615777:263114426311442631542399Desulfotomaculum reducens MI-1 chromosome, complete genomeflagellar basal-body rod protein FlgB1e-1581.6
NC_015565:1920329:192107719210771921475399Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeflagellar basal-body rod protein FlgB3e-1580.5
NC_009617:4911595:492838249283824928786405Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeflagellar basal body rod protein FlgB3e-1580.1
NC_007503:861668:875816875816876226411Carboxydothermus hydrogenoformans Z-2901, complete genomeflagellar basal-body rod protein FlgB5e-1579.7
NC_009486:1403175:140775014077501408133384Thermotoga petrophila RKU-1 chromosome, complete genomeflagellar basal-body rod protein FlgB8e-1579
NC_010718:1454087:146154214615421461946405Natranaerobius thermophilus JW/NM-WN-LF, complete genomeflagellar basal-body rod protein FlgB1e-1478.6
NC_010483:1467616:147219114721911472574384Thermotoga sp. RQ2, complete genomeflagellar basal-body rod protein FlgB2e-1478.2
NC_013642:1425795:143200214320021432385384Thermotoga naphthophila RKU-10, complete genomeflagellar basal-body rod protein FlgB2e-1478.2
NC_019978:625476:630589630589630993405Halobacteroides halobius DSM 5150, complete genomeflagellar basal-body rod protein FlgB3e-1270.9
NC_015589:1240197:126671012667101267111402Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeflagellar basal-body rod protein FlgB1e-1168.6
NC_014377:1060000:107254410725441072954411Thermosediminibacter oceani DSM 16646 chromosome, complete genomeflagellar basal-body rod protein FlgB1e-1168.6
NC_015391:2059191:209017120901712090599429Carnobacterium sp. 17-4 chromosome, complete genomeflagellar basal body rod protein FlgB9e-1165.5
NC_012880:1765920:180855418085541808967414Dickeya dadantii Ech703, complete genomeflagellar basal-body rod protein FlgB3e-0960.5
NC_014721:434501:450126450126450527402Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeflagellar basal-body rod protein flgb1e-0858.5
NC_008710:277207:305305305305305718414Borrelia turicatae 91E135, complete genomeflagellar basal-body rod protein FlgB1e-0858.2
NC_010424:1857062:185952818595281859926399Candidatus Desulforudis audaxviator MP104C, complete genomeflagellar basal-body rod protein FlgB4e-0856.6
NC_010673:291679:306013306013306420408Borrelia hermsii DAH, complete genomeflagellar basal-body rod protein FlgB5e-0856.6
NC_009633:2725128:274043627404362740846411Alkaliphilus metalliredigens QYMF chromosome, complete genomeflagellar basal-body rod protein FlgB8e-0855.8
NC_009012:574145:578005578005578409405Clostridium thermocellum ATCC 27405, complete genomeflagellar basal-body rod protein FlgB1e-0755.5
NC_020134:586840:591118591118591498381Clostridium stercorarium subsp. stercorarium DSM 8532, completeflagellar basal-body rod protein FlgB2e-0754.7
NC_014652:628435:634794634794635192399Caldicellulosiruptor hydrothermalis 108 chromosome, completeflagellar basal-body rod protein flgb2e-0754.7
NC_014376:3732547:373626137362613736641381Clostridium saccharolyticum WM1 chromosome, complete genomeflagellar basal-body rod protein FlgB2e-0754.3
NC_013205:1123280:117111811711181171522405Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,flagellar basal-body rod protein FlgB3e-0753.5
NC_011244:319373:325234325234325641408Borrelia recurrentis A1, complete genomeflagellar basal body rod protein FlgB4e-0753.5
NC_011899:1807365:181165018116501812045396Halothermothrix orenii H 168, complete genomeflagellar basal-body rod protein FlgB9e-0752.4