Pre_GI: BLASTP Hits

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Query: NC_008358:2257787:2271561 Hyphomonas neptunium ATCC 15444, complete genome

Start: 2271561, End: 2272391, Length: 831

Host Lineage: Hyphomonas neptunium; Hyphomonas; Hyphomonadaceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Marine member of dimorphic prosthecate bacteria. This organism is also known as Hyphomicrobium neptunium. It has a biphasic life style, which consists of a motile phase of flagellated swarmer cells, and a cessile phase in which a long prosthecate is produced at one end of the bacteria through which budding cells emerge. Newly budded cells in turn produce flagella and go through a motile phase and the cycle continues. These organisms can colonize the surfaces of marine environments which enables additional species to colonize at later stages. This organism may be of use in treatment of water as they attach to a solid surface and are capable of degradation of a number of pollutants including aromatic hydrocarbons, dimethyl sulfoxide and methyl chloride.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008800:4389687:438968743896874390520834Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein2e-43176
NC_017154:3094000:311353131135313114385855Yersinia pestis D106004 chromosome, complete genomehypothetical protein2e-41169
NC_003143:2895617:289561728956172896471855Yersinia pestis CO92, complete genomehypothetical protein2e-41169
NC_004088:1291754:129175412917541292608855Yersinia pestis KIM, complete genomehypothetical protein2e-41169
NC_008149:1221637:122163712216371222491855Yersinia pestis Nepal516, complete genomehypothetical protein2e-41169
NC_011745:291422:310012310012310845834Escherichia coli ED1a chromosome, complete genomeputative transcriptional regulator9e-41167
NC_012724:2443500:244352924435292444449921Burkholderia glumae BGR1 chromosome 1, complete genomeTranscriptional regulator, RpiR family protein1e-40167
NC_008254:3980327:399500239950023995925924Mesorhizobium sp. BNC1, complete genometranscriptional regulator, RpiR family1e-34146
NC_011985:61003:972699726998153885Agrobacterium radiobacter K84 chromosome 1, complete genometranscriptional regulator protein3e-32138
NC_009079:1492664:151177715117771512637861Burkholderia mallei NCTC 10247 chromosome I, complete sequencephosphosugar-binding transcriptional regulator, RpiR family2e-25116
NC_015376:2241000:224701822470182247878861Burkholderia gladioli BSR3 chromosome chromosome 2, completetranscriptional regulator, RpiR family9e-25114
NC_014640:6745873:679667267966726797544873Achromobacter xylosoxidans A8 chromosome, complete genomeRpiR family transcriptional regulator6e-23108
NC_014323:3976351:403028740302874031168882Herbaspirillum seropedicae SmR1 chromosome, complete genometranscription regulator protein3e-21102
NC_010505:5035668:504276550427655043655891Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, RpiR family3e-2099
NC_019973:5869500:588133358813335882238906Mesorhizobium australicum WSM2073, complete genometranscriptional regulator8e-2097.8
NC_014923:5940500:595237359523735953278906Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completesugar isomerase (SIS)8e-2097.8
NC_015675:6493444:650704465070446507949906Mesorhizobium opportunistum WSM2075 chromosome, complete genomeRpiR family transcriptional regulator8e-2097.8
NC_011958:1031592:106964510696451070505861Rhodobacter sphaeroides KD131 chromosome 2, complete genomeTranscriptional regulator, RpiR family2e-1789.4
NC_014323:3976351:402026640202664021225960Herbaspirillum seropedicae SmR1 chromosome, complete genometranscription regulator protein2e-1686.7
NC_014657:1193985:119567511956751196538864Caldicellulosiruptor owensensis OL chromosome, complete genometranscriptional regulator, rpir family2e-1686.3
NC_016630:1385719:139135113913511392217867Filifactor alocis ATCC 35896 chromosome, complete genometranscriptional regulator6e-1374.7
NC_009668:46010:646946469465548855Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceRpiR family transcriptional regulator1e-1067.4
NC_020063:2449554:247206824720682472898831Enterobacteriaceae bacterium strain FGI 57, complete genometranscriptional regulator2e-0963.2
NC_004129:2440744:245737724573772458264888Pseudomonas fluorescens Pf-5, complete genomeSIS domain protein3e-0962.4
NC_008752:2056547:207339120733912074260870Acidovorax avenae subsp. citrulli AAC00-1, complete genometranscriptional regulator, RpiR family6e-0961.6
NC_017270:1755552:176398117639811764817837Vibrio cholerae LMA3984-4 chromosome chromosome I, completeSialic acid utilization regulator, RpiR family5e-0858.5
NC_012668:1688500:172144717214471722277831Vibrio cholerae MJ-1236 chromosome 1, complete sequencesialic acid utilization regulator RpiR family9e-0857.8
NC_012578:1838470:187236418723641873200837Vibrio cholerae M66-2 chromosome I, complete sequencePutative HTH-type transcriptional regulator ybbH1e-0757.4
NC_009457:1444449:147833414783341479170837Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein1e-0757.4
NC_016445:1363831:139663113966311397446816Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completesialic acid utilization regulator RpiR family2e-0756.2
NC_015389:616430:639327639327640196870Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, RpiR family2e-0756.2
NC_011661:1807101:181101118110111811856846Dictyoglomus turgidum DSM 6724, complete genometranscriptional regulator, RpiR family8e-0754.3
NC_015379:3570658:359231735923173593171855Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,conserved hypothetical protein, containing Helix-turn-helix domain, rpiR family1e-0653.9
NC_013515:1125739:113914011391401139958819Streptobacillus moniliformis DSM 12112, complete genometranscriptional regulator, RpiR family2e-0653.1
NC_013171:1677543:168050016805001681339840Anaerococcus prevotii DSM 20548, complete genometranscriptional regulator, RpiR family3e-0652.4