Pre_GI: BLASTP Hits

Some Help

Query: NC_008269:428898:451805 Rhodococcus sp. RHA1 plasmid pRHL1, complete sequence

Start: 451805, End: 452554, Length: 750

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015957:5310000:532864653286465329404759Streptomyces violaceusniger Tu 4113 chromosome, complete genomeIclR family transcriptional regulator2e-1273.2
NC_011830:4645453:465649246564924657265774Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, IclR family7e-1270.9
NC_018870:484000:489181489181489951771Thermacetogenium phaeum DSM 12270 chromosome, complete genomeHTH-type transcriptional regulator8e-1270.9
NC_010718:1229355:122935512293551230158804Natranaerobius thermophilus JW/NM-WN-LF, complete genometranscriptional regulator, IclR family4e-1168.6
NC_015844:5375784:538906253890625389859798Zobellia galactanivorans, complete genomeIclR-type transcriptional regulator7e-1167.8
NC_013757:3012130:301834030183403019140801Geodermatophilus obscurus DSM 43160, complete genometranscriptional regulator, IclR family9e-1167.4
NC_004460:973738:987891987891988673783Vibrio vulnificus CMCP6 chromosome II, complete sequenceTranscriptional regulator1e-1067
NC_015844:5375784:537986353798635380654792Zobellia galactanivorans, complete genomeIclR-type transcriptional regulator1e-1067
NC_020134:845164:851861851861852637777Clostridium stercorarium subsp. stercorarium DSM 8532, completepectin degradation repressor protein KdgR3e-1065.5
NC_007644:416000:418409418409419215807Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, IclR family7e-1064.3
NC_014657:2236193:225991522599152260712798Caldicellulosiruptor owensensis OL chromosome, complete genometranscriptional regulator, iclr family3e-0962.4
NC_016943:1560000:156831215683121569094783Blastococcus saxobsidens DD2, complete genomeIclR family transcriptional regulator3e-0962.4
NC_012912:2216749:223158522315852232376792Dickeya zeae Ech1591, complete genometranscriptional regulator, IclR family4e-0961.6
NC_014974:1076565:109702010970201097802783Thermus scotoductus SA-01 chromosome, complete genomeIclR family transcriptional regulator6e-0961.2
NC_014666:1601972:160197216019721602739768Frankia sp. EuI1c chromosome, complete genometranscriptional regulator, IclR family7e-0960.8
NC_016584:593954:606783606783607556774Desulfosporosinus orientis DSM 765 chromosome, complete genometranscriptional regulator9e-0960.5
NC_017192:683493:700449700449701183735Arcobacter sp. L, complete genometranscriptional regulator1e-0860.5
NC_013510:5394432:540096854009685401714747Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, IclR family2e-0860.1
NC_019978:2532640:254798025479802548762783Halobacteroides halobius DSM 5150, complete genometranscriptional regulator2e-0859.7
NC_019974:1184871:119823511982351198999765Natronococcus occultus SP4, complete genometranscriptional regulator2e-0859.3
NC_014500:2589089:259686025968602597651792Dickeya dadantii 3937 chromosome, complete genomeDNA-binding transcriptional regulatory protein KdgR5e-0858.5
NC_014392:2311243:231796223179622318795834Caldicellulosiruptor obsidiansis OB47 chromosome, complete genometranscriptional regulator, IclR family5e-0858.2
NC_013967:1967896:197001819700181970779762Haloferax volcanii DS2 chromosome, complete genomeArcR family transcription regulator6e-0857.8
NC_010997:830500:836841836841837644804Rhizobium etli CIAT 652 plasmid pC, complete sequenceputative transcriptional regulator protein, IclR family6e-0857.8
NC_007503:1111457:113341811334181134203786Carboxydothermus hydrogenoformans Z-2901, complete genometranscriptional regulator, IclR family7e-0857.8
NC_016048:308342:343421343421344185765Oscillibacter valericigenes Sjm18-20, complete genomeputative IclR family transcriptional regulator8e-0857.4
NC_008593:640000:648290648290649051762Clostridium novyi NT, complete genometranscription regulator (IclR family) BH21378e-0857.4
NC_003888:6853107:686865768686576869469813Streptomyces coelicolor A3(2), complete genometranscriptional regulator for glyoxylate bypass8e-0857.4
NC_005139:518760:535254535254536063810Vibrio vulnificus YJ016 chromosome I, complete sequencetranscriptional regulator1e-0757
NC_015577:2508027:253114025311402531940801Treponema azotonutricium ZAS-9 chromosome, complete genometranscriptional regulator1e-0757
NC_015589:2447132:244890124489012449674774Desulfotomaculum ruminis DSM 2154 chromosome, complete genometranscriptional regulator IclR1e-0757
NC_014206:1618988:162671116267111627487777Geobacillus sp. C56-T3 chromosome, complete genomeIclR family transcriptional regulator2e-0756.2
NC_020302:146807:162161162161162958798Corynebacterium halotolerans YIM 70093 = DSM 44683, completeIclR family transcriptional regulator2e-0756.2
NC_008043:499399:513488513488514279792Silicibacter sp. TM1040 mega plasmid, complete sequencetranscriptional regulator, IclR family2e-0755.8
NC_019962:1750497:186400218640021864754753Natrinema pellirubrum DSM 15624, complete genometranscriptional regulator3e-0755.5
NC_012880:2425330:243403424340342434825792Dickeya dadantii Ech703, complete genometranscriptional regulator, IclR family3e-0755.5
NC_006510:1995916:201138620113862012162777Geobacillus kaustophilus HTA426, complete genometranscriptional regulator4e-0755.5
NC_007644:362000:379800379800380564765Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, IclR family6e-0754.7
NC_015944:10500:256442564426579936Haloarcula hispanica ATCC 33960 plasmid pHH400, complete sequencetranscription regulator9e-0754.3
NC_011961:528837:528837528837529649813Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequencetranscriptional regulator, IclR family9e-0753.9
NC_019974:1115553:116454311645431165343801Natronococcus occultus SP4, complete genometranscriptional regulator9e-0753.9
NC_015458:2614108:263205226320522632963912Pusillimonas sp. T7-7 chromosome, complete genomeputative transcriptional regulator9e-0753.9
NC_008596:4152916:416604641660464166819774Mycobacterium smegmatis str. MC2 155, complete genomeputative IclR family protein transcriptional regulator1e-0653.5
NC_019962:1750497:176870817687081769508801Natrinema pellirubrum DSM 15624, complete genometranscriptional regulator2e-0652.8
NC_018000:1852691:187154618715461872355810Sinorhizobium fredii USDA 257 chromosome, complete genomeacetate operon repressor2e-0652.8
NC_003888:4314389:431864843186484319373726Streptomyces coelicolor A3(2), complete genometranscriptional regulator2e-0652.8
NC_013743:505842:527387527387528151765Haloterrigena turkmenica DSM 5511, complete genometranscriptional regulator, IclR family2e-0652.8
NC_015563:5289875:531011553101155310942828Delftia sp. Cs1-4 chromosome, complete genomeIclR family transcriptional regulator3e-0652.4
NC_012988:731790:737319737319738095777Methylobacterium extorquens DM4, complete genomeDNA-binding transcriptional repressor, IclR family3e-0652.4
NC_011001:163813:181278181278182174897Burkholderia cenocepacia J2315 chromosome 2, complete sequencetranscriptional regulator KdgR4e-0652
NC_013929:1670402:167536316753631676148786Streptomyces scabiei 87.22 chromosome, complete genometranscriptional regulator7e-0651.2
NC_008148:792610:805439805439806221783Rubrobacter xylanophilus DSM 9941, complete genometranscriptional regulator, IclR family8e-0650.8
NC_016860:4024000:403866040386604039412753Salmonella enterica subsp. enterica serovar Typhimurium strputative HTH-type transcriptional regulator yfaX8e-0650.8
NC_019974:3013338:304036830403683041132765Natronococcus occultus SP4, complete genometranscriptional regulator8e-0650.8
NC_013923:45876:523995239953202804Natrialba magadii ATCC 43099 plasmid pNMAG01, complete sequencetranscriptional regulator, IclR family1e-0550.4