Pre_GI: BLASTP Hits

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Query: NC_008228:3679949:3685539 Pseudoalteromonas atlantica T6c, complete genome

Start: 3685539, End: 3689078, Length: 3540

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015424:1603000:1616112161611216182142103Aeromonas veronii B565 chromosome, complete genomehypothetical protein1e-73279
NC_015276:3669263:3678287367828736803862100Marinomonas mediterranea MMB-1 chromosome, complete genomeprotein of unknown function DUF1154e-65250
NC_008570:1852286:1864132186413218661412010Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein1e-61238
NC_012997:1335902:1352732135273213548012070Teredinibacter turnerae T7901, complete genomehypothetical protein1e-53212
NC_020304:3447847:3453886345388634571973312Desulfocapsa sulfexigens DSM 10523, complete genomehypothetical protein5e-33144
NC_013223:724394:7552117552117571481938Desulfohalobium retbaense DSM 5692, complete genomeprotein of unknown function DUF1152e-24115
NC_011420:3894660:3910110391011039121522043Rhodospirillum centenum SW, complete genomehypothetical protein7e-1790.5
NC_005071:87907:1020591020591041402082Prochlorococcus marinus str. MIT 9313, complete genomehypothetical protein4e-1687.8
NC_008820:91967:1290511290511310662016Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein1e-1586.3
NC_010723:801215:8156808156808174791800Clostridium botulinum E3 str. Alaska E43, complete genomehypothetical protein5e-1480.9
NC_019897:128610:1838111838111860752265Thermobacillus composti KWC4 chromosome, complete genomehypothetical protein2e-1379
NC_010674:828191:8385018385018403001800Clostridium botulinum B str. Eklund 17B, complete genomehypothetical protein9e-1377
NC_012781:3087467:3088654308865430905011848Eubacterium rectale ATCC 33656, complete genomehypothetical protein3e-1275.1
NC_012108:4118888:4139378413937841422422865Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein6e-1273.9
NC_019978:2260395:2268198226819822700991902Halobacteroides halobius DSM 5150, complete genomehypothetical protein4e-1171.6
NC_020210:3169258:3186543318654331888102268Geobacillus sp. GHH01, complete genomeDUF115 family protein4e-1171.2
NC_015660:391627:3984323984323997991368Geobacillus thermoglucosidasius C56-YS93 chromosome, completehypothetical protein2e-1068.9
NC_009012:2661795:2660402266040226618141413Clostridium thermocellum ATCC 27405, complete genomeprotein of unknown function DUF1157e-1067.4
NC_018645:4104302:4104302410430241071812880Desulfobacula toluolica Tol2, complete genomehypothetical protein2e-0965.9
NC_014915:3259440:3275250327525032775262277Geobacillus sp. Y412MC52 chromosome, complete genomeprotein of unknown function DUF1151e-0863.2
NC_014650:376070:3812093812093829931785Geobacillus sp. Y4.1MC1 chromosome, complete genomehypothetical protein2e-0862
NC_017297:2905138:2905138290513829069371800Clostridium botulinum F str. 230613 chromosome, complete genomehypothetical protein3e-0862
NC_009699:2901497:2905000290500029067991800Clostridium botulinum F str. Langeland chromosome, complete genomehypothetical protein3e-0862
NC_011899:1807365:1821992182199218238481857Halothermothrix orenii H 168, complete genomehypothetical protein3e-0862
NC_015660:391627:3963213963213981051785Geobacillus thermoglucosidasius C56-YS93 chromosome, completehypothetical protein4e-0861.6
NC_008820:91967:1232971232971253272031Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein5e-0861.2
NC_016641:945284:9463289463289481451818Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein2e-0759.3
NC_017295:2286911:2292771229277122939881218Clostridium acetobutylicum EA 2018 chromosome, complete genomehypothetical protein2e-0759.3
NC_007954:1494291:1504115150411515065892475Shewanella denitrificans OS217, complete genomeprotein of unknown function DUF1153e-0758.5
NC_008820:91967:1270221270221290432022Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein5e-0757.8
NC_004557:1826977:1826977182697718287791803Clostridium tetani E88, complete genomehypothetical protein1e-0656.6
NC_017295:2286911:2294425229442522962031779Clostridium acetobutylicum EA 2018 chromosome, complete genomehypothetical protein2e-0656.2
NC_017295:2286911:2288232228823222898661635Clostridium acetobutylicum EA 2018 chromosome, complete genomehypothetical protein2e-0655.5
NC_009012:2661795:2662160266216026641061947Clostridium thermocellum ATCC 27405, complete genomeprotein of unknown function DUF1154e-0655.1