Pre_GI: BLASTP Hits

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Query: NC_008228:2068641:2074186 Pseudoalteromonas atlantica T6c, complete genome

Start: 2074186, End: 2075169, Length: 984

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015497:2831148:283964728396472840630984Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomehypothetical protein0639
NC_015276:3321277:333772833377283338696969Marinomonas mediterranea MMB-1 chromosome, complete genomehypothetical protein2e-112405
NC_007912:3921308:392687739268773927854978Saccharophagus degradans 2-40, complete genomeCheW protein5e-105381
NC_018679:2211000:221583722158372216814978Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completehypothetical protein2e-104379
NC_007912:4396972:440632444063244407301978Saccharophagus degradans 2-40, complete genomehypothetical protein1e-103376
NC_018678:2140182:214884421488442149821978Alteromonas macleodii str. 'English Channel 673' chromosome,hypothetical protein2e-103375
NC_007954:138410:149292149292150269978Shewanella denitrificans OS217, complete genomeprotein of unknown function DUF15686e-103374
NC_007912:3828980:384387138438713844848978Saccharophagus degradans 2-40, complete genomehypothetical protein1e-101369
NC_014541:2736641:274570227457022746688987Ferrimonas balearica DSM 9799 chromosome, complete genomeprotein of unknown function DUF15684e-98358
NC_007912:335500:349393349393350370978Saccharophagus degradans 2-40, complete genomehypothetical protein2e-98358
NC_007912:335500:347913347913348890978Saccharophagus degradans 2-40, complete genomehypothetical protein1e-97356
NC_014541:1996811:200392220039222004908987Ferrimonas balearica DSM 9799 chromosome, complete genomeprotein of unknown function DUF15682e-97355
NC_004347:103967:125325125325126302978Shewanella oneidensis MR-1, complete genomehypothetical protein6e-97354
NC_009901:3563264:357575535757553576732978Shewanella pealeana ATCC 700345, complete genomeprotein of unknown function DUF15688e-94343
NC_010506:5195000:520739152073915208368978Shewanella woodyi ATCC 51908, complete genomeprotein of unknown function DUF15687e-92337
NC_010506:4404377:442188844218884422865978Shewanella woodyi ATCC 51908, complete genomeprotein of unknown function DUF15687e-91333
NC_008740:2989856:3000104300010430011141011Marinobacter aquaeolei VT8, complete genomeprotein of unknown function DUF15681e-84313
NC_019902:2306961:2313232231323223143711140Thioalkalivibrio nitratireducens DSM 14787, complete genomeTransposase-like protein6e-82304
NC_007912:4125970:413810641381064138831726Saccharophagus degradans 2-40, complete genome3e-80298
NC_012997:4026000:4045975404597540470571083Teredinibacter turnerae T7901, complete genomehypothetical protein1e-77290
NC_008228:2295841:230073023007302301173444Pseudoalteromonas atlantica T6c, complete genomehypothetical protein3e-77288
NC_009831:4447919:4461513446151344625561044Shewanella sediminis HAW-EB3, complete genomeprotein of unknown function DUF15685e-77288
NC_012997:4672147:4680821468082146818881068Teredinibacter turnerae T7901, complete genomehypothetical protein1e-76286
NC_012997:4621764:4625430462543046265001071Teredinibacter turnerae T7901, complete genomehypothetical protein2e-76286
NC_013889:1514799:1524962152496215259871026Thioalkalivibrio sp. K90mix chromosome, complete genomeprotein of unknown function DUF15682e-73275
NC_014836:2581939:2593204259320425942051002Desulfurispirillum indicum S5 chromosome, complete genomehypothetical protein8e-73274
NC_012997:334500:3448523448523459281077Teredinibacter turnerae T7901, complete genomehypothetical protein6e-72271
NC_011901:2914000:2921657292165729226671011Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein2e-70266
NC_014012:3812754:381764838176483818595948Shewanella violacea DSS12, complete genomehypothetical protein4e-68258
NC_009901:4028175:404083140408314041472642Shewanella pealeana ATCC 700345, complete genomeprotein of unknown function DUF15681e-63243
NC_018678:2140182:215254121525412153098558Alteromonas macleodii str. 'English Channel 673' chromosome,hypothetical protein8e-55214
NC_019902:498500:502717502717503568852Thioalkalivibrio nitratireducens DSM 14787, complete genomeTransposase-like protein1e-54214
NC_012997:59407:736777367774360684Teredinibacter turnerae T7901, complete genomehypothetical protein7e-38157
NC_017080:191906:1993231993232003271005Phycisphaera mikurensis NBRC 102666, complete genomehypothetical protein2e-32140
NC_017080:575000:5825025825025835031002Phycisphaera mikurensis NBRC 102666, complete genomehypothetical protein2e-31136
NC_017080:1194199:1201622120162212026261005Phycisphaera mikurensis NBRC 102666, complete genomehypothetical protein5e-31135
NC_017080:575000:5841225841225851261005Phycisphaera mikurensis NBRC 102666, complete genomehypothetical protein5e-31135
NC_012997:59407:719387193872375438Teredinibacter turnerae T7901, complete genomehypothetical protein2e-26119
NC_007484:79413:934399343993750312Nitrosococcus oceani ATCC 19707, complete genome2e-23110
NC_017080:942416:9543529543529553981047Phycisphaera mikurensis NBRC 102666, complete genomehypothetical protein2e-23110
NC_017080:942416:9590469590469601311086Phycisphaera mikurensis NBRC 102666, complete genomehypothetical protein2e-22107
NC_017080:1194199:1205537120553712066221086Phycisphaera mikurensis NBRC 102666, complete genomehypothetical protein1e-22107
NC_012997:4672147:468202346820234682334312Teredinibacter turnerae T7901, complete genomehypothetical protein9e-23107
NC_015497:2831148:283870528387052838875171Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome8e-21101
NC_015497:2831148:284088528408852841031147Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome2e-1997.1
NC_017080:2814629:282888928288892829842954Phycisphaera mikurensis NBRC 102666, complete genomehypothetical protein5e-1995.5
NC_012997:1335902:134652713465271346772246Teredinibacter turnerae T7901, complete genomehistidine kinase8e-1788.2
NC_008740:2989856:299819529981952998368174Marinobacter aquaeolei VT8, complete genomeconserved hypothetical transposase3e-1376.3
NC_007912:4125970:413883241388324139083252Saccharophagus degradans 2-40, complete genome1e-0860.5
NC_020541:2694836:269510126951012695808708Rhodanobacter sp. 2APBS1, complete genometransposase6e-0858.5
NC_008781:708811:726827726827727525699Polaromonas naphthalenivorans CJ2, complete genomeprotein of unknown function DUF15687e-0858.2
NC_018012:1326553:135367013536701354383714Thiocystis violascens DSM 198 chromosome, complete genometransposase2e-0757.4
NC_015556:130437:144795144795145490696Pseudomonas fulva 12-X chromosome, complete genomeputative transposase2e-0757
NC_007947:485828:492320492320493018699Methylobacillus flagellatus KT, complete genomeprotein of unknown function DUF15686e-0755.1
NC_008782:752686:779743779743780510768Acidovorax sp. JS42, complete genomeprotein of unknown function DUF15686e-0755.1
NC_012660:165559:174227174227174916690Pseudomonas fluorescens SBW25 chromosome, complete genomeputative transposase7e-0755.1
NC_011992:717107:736983736983737684702Acidovorax ebreus TPSY, complete genomeprotein of unknown function DUF15687e-0755.1
NC_018868:282738:290835290835291431597Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genometransposase-like protein7e-0755.1
NC_020541:2694836:270339427033942704113720Rhodanobacter sp. 2APBS1, complete genometransposase9e-0754.7
NC_009663:738846:755751755751756521771Sulfurovum sp. NBC37-1, complete genomehypothetical protein2e-0653.9
NC_014935:1834569:184162218416221842392771Nitratifractor saLSUginis DSM 16511 chromosome, complete genomehypothetical protein2e-0653.1
NC_016830:1719407:173258417325841733285702Pseudomonas fluorescens F113 chromosome, complete genometransposase-like protein3e-0653.1
NC_018080:42897:534835348354175693Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein6e-0652
NC_011770:42901:542895428954918630Pseudomonas aeruginosa LESB58, complete genomehypothetical protein6e-0652
NC_018080:42897:548235482355392570Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein6e-0652
NC_009656:2801885:283122428312242831721498Pseudomonas aeruginosa PA7 chromosome, complete genometransposase-like p;rotein9e-0651.2