Pre_GI: BLASTP Hits

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Query: NC_008148:2231045:2267216 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 2267216, End: 2268502, Length: 1287

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003047:3360000:3380522338052233818111290Sinorhizobium meliloti 1021, complete genomePUTATIVE AMINO ACID DEHYDROGENASE TRANSMEMBRANE PROTEIN4e-49196
NC_015656:1876627:1879602187960218809211320Frankia symbiont of Datisca glomerata chromosome, complete genomeD-amino-acid dehydrogenase4e-48192
NC_002678:5060670:5101501510150151027361236Mesorhizobium loti MAFF303099, complete genomeD-amino acid dehydrogenase, small subunit1e-47191
NC_010511:4258000:4286424428642442876591236Methylobacterium sp. 4-46 chromosome, complete genomeFAD dependent oxidoreductase4e-41169
NC_011894:4013830:4028116402811640293511236Methylobacterium nodulans ORS 2060, complete genomeFAD dependent oxidoreductase1e-39164
NC_020541:1717140:1719831171983117211111281Rhodanobacter sp. 2APBS1, complete genomeglycine/D-amino acid oxidase, deaminating2e-39163
NC_018644:516157:5168995168995181251227Alpha proteobacterium HIMB59 chromosome, complete genomeFAD dependent oxidoreductase1e-38161
NC_012791:821371:8213718213718226721302Variovorax paradoxus S110 chromosome 1, complete genomeD-amino-acid dehydrogenase3e-38159
NC_018000:1914945:1962052196205219633021251Sinorhizobium fredii USDA 257 chromosome, complete genomeD-amino acid dehydrogenase small subunit DadA4e-36152
NC_017192:1000096:1003301100330110045511251Arcobacter sp. L, complete genomeD-amino acid dehydrogenase3e-35150
NC_013456:3011518:3011518301151830127741257Vibrio sp. Ex25 chromosome 1, complete genomeD-amino acid dehydrogenase small subunit3e-35150
NC_011992:3375929:3375929337592933772391311Acidovorax ebreus TPSY, complete genomeD-amino-acid dehydrogenase7e-35148
NC_014931:3886405:3887567388756738888261260Variovorax paradoxus EPS chromosome, complete genomeFAD dependent oxidoreductase8e-35148
NC_011894:4013830:4043380404338040446151236Methylobacterium nodulans ORS 2060, complete genomeFAD dependent oxidoreductase1e-34147
NC_008767:136958:1600371600371612931257Neisseria meningitidis FAM18, complete genomeD-amino acid dehydrogenase small subunit1e-33144
NC_017515:155634:1783901783901796461257Neisseria meningitidis M04-240196 chromosome, complete genomeD-amino acid dehydrogenase small subunit6e-33142
NC_017517:153379:1758351758351770911257Neisseria meningitidis M01-240355 chromosome, complete genomeD-amino acid dehydrogenase small subunit4e-33142
NC_017505:148644:1726361726361738921257Neisseria meningitidis alpha710 chromosome, complete genomeD-amino acid dehydrogenase small subunit4e-33142
NC_017518:150991:1737591737591750151257Neisseria meningitidis NZ-05/33 chromosome, complete genomeD-amino acid dehydrogenase small subunit7e-33141
NC_014500:2525880:2539624253962425408741251Dickeya dadantii 3937 chromosome, complete genomeD-amino acid dehydrogenase7e-33141
NC_017516:149657:1724081724081736641257Neisseria meningitidis H44/76 chromosome, complete genomeD-amino acid dehydrogenase small subunit8e-33141
NC_003112:149593:1723461723461736021257Neisseria meningitidis MC58, complete genomeD-amino acid dehydrogenase small subunit8e-33141
NC_017513:141291:1643701643701656261257Neisseria meningitidis G2136 chromosome, complete genomeD-amino acid dehydrogenase small subunit1e-32141
NC_017501:147933:1714321714321726881257Neisseria meningitidis 8013, complete genomeD-amino acid dehydrogenase small subunit2e-32140
NC_011035:2027916:2056102205610220573611260Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeD-amino acid dehydrogenase small subunit5e-32139
NC_017511:1936331:1964446196444619657051260Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeD-amino acid dehydrogenase small subunit5e-32139
NC_010524:1005355:1010746101074610120531308Leptothrix cholodnii SP-6, complete genomeD-amino-acid dehydrogenase7e-32138
NC_003911:3864852:3867798386779838690631266Silicibacter pomeroyi DSS-3, complete genomeoxidoreductase, FAD-binding1e-31137
NC_010125:2483122:2509050250905025103031254Gluconacetobacter diazotrophicus PAl 5, complete genomeputative D-amino acid dehydrogenase small subunit2e-31137
NC_011365:738321:7623657623657636181254Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeD-amino-acid dehydrogenase2e-31137
NC_002947:4994335:5031207503120750325051299Pseudomonas putida KT2440, complete genomeD-amino acid dehydrogenase small subunit2e-31137
NC_012912:2285778:2288432228843222896821251Dickeya zeae Ech1591, complete genomeD-amino-acid dehydrogenase4e-31135
NC_020211:2985157:2988936298893629902401305Serratia marcescens WW4, complete genomeD-amino acid dehydrogenase5e-31135
NC_016745:546249:5502995502995516091311Oceanimonas sp. GK1 chromosome, complete genomeFAD dependent oxidoreductase7e-31135
NC_008313:886248:8909268909268922301305Ralstonia eutropha H16 chromosome 1, complete sequenceD-amino-acid dehydrogenase1e-30134
NC_015727:1076927:1083362108336210846691308Cupriavidus necator N-1 plasmid BB1p, complete sequenceD-amino acid dehydrogenase small subunit4e-30132
NC_011894:6485500:6494069649406964953431275Methylobacterium nodulans ORS 2060, complete genomeFAD dependent oxidoreductase4e-30132
NC_015424:2316228:2353902235390223551671266Aeromonas veronii B565 chromosome, complete genomeD-amino acid dehydrogenase small subunit1e-29131
NC_020181:734477:7507297507297520271299Enterobacter aerogenes EA1509E, complete genomeD-amino acid dehydrogenase small subunit2e-27124
NC_017986:4124335:4152037415203741532841248Pseudomonas putida ND6 chromosome, complete genomeFAD dependent oxidoreductase5e-27122
NC_015856:633353:6512716512716525391269Collimonas fungivorans Ter331 chromosome, complete genomeD-amino acid dehydrogenase small subunit6e-27122
NC_004129:2440744:2453807245380724550481242Pseudomonas fluorescens Pf-5, complete genomeD-amino acid dehydrogenase, small subunit family protein7e-26118
NC_013282:2582720:2582720258272025840031284Cronobacter turicensis, complete genomeD-amino acid dehydrogenase small subunit4e-25116
NC_009952:526456:5450545450545463131260Dinoroseobacter shibae DFL 12, complete genomeD-amino-acid dehydrogenase small subunit2e-24114
NC_010730:741842:7791637791637802601098Sulfurihydrogenibium sp. YO3AOP1, complete genomeglycine oxidase ThiO7e-22105
NC_019896:2805098:2830603283060328317121110Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeGlycine oxidase1e-20101
NC_018080:5192264:5197779519777951988551077Pseudomonas aeruginosa DK2 chromosome, complete genomeD-amino acid oxidase1e-20101
NC_008463:5364428:5368835536883553699291095Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative Glycine/D-amino acid oxidases2e-20100
NC_009439:1075170:1088508108850810895931086Pseudomonas mendocina ymp, complete genomeglycine oxidase ThiO9e-2098.2
NC_021171:1689518:1704959170495917060681110Bacillus sp. 1NLA3E, complete genomeFAD-dependent glycine oxidase ThiO4e-1996.3
NC_015410:1144272:1156632115663211576961065Pseudomonas mendocina NK-01 chromosome, complete genomeglycine oxidase ThiO9e-1995.1
NC_009434:1068281:108088810808881081748861Pseudomonas stutzeri A1501, complete genomeoxidoreductase, FAD-binding1e-1894.4
NC_015957:7348269:7378287737828773794651179Streptomyces violaceusniger Tu 4113 chromosome, complete genomeFAD dependent oxidoreductase5e-1892.4
NC_016641:2773757:2781634278163427828421209Paenibacillus terrae HPL-003 chromosome, complete genomesarcosine oxidase subunit beta2e-1790.9
NC_020210:3341976:3350044335004433511171074Geobacillus sp. GHH01, complete genomesarcosine oxidase subunit beta2e-1790.5
NC_014831:2201246:2223388222338822245871200Thermaerobacter marianensis DSM 12885 chromosome, complete genomeglycine oxidase ThiO3e-1790.1
NC_015740:926920:9394409394409405371098Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeFAD-binding oxidoreductase3e-1790.1
NC_009328:3322802:3330853333085333319261074Geobacillus thermodenitrificans NG80-2 chromosome, complete genomesarcosine oxidase subunit beta3e-1789.7
NC_014815:4621552:4650013465001346511611149Micromonospora sp. L5 chromosome, complete genomefad dependent oxidoreductase5e-1789.4
NC_011982:206784:2278512278512289211071Agrobacterium vitis S4 plasmid pTiS4, complete sequenceD-nopaline dehydrogenase1e-1585.1
NC_013926:71186:8478584785859421158Aciduliprofundum boonei T469 chromosome, complete genomeFAD dependent oxidoreductase9e-1685.1
NC_005945:754517:7561427561427572511110Bacillus anthracis str. Sterne, complete genomeglycine oxidase9e-1685.1
NC_014394:2228470:2232697223269722337611065Gallionella capsiferriformans ES-2 chromosome, complete genomeglycine oxidase ThiO9e-1685.1
NC_013523:2560000:2574631257463125757641134Sphaerobacter thermophilus DSM 20745 chromosome 1, complete genomeFAD dependent oxidoreductase1e-1584.7
NC_015556:4118304:4123843412384341249161074Pseudomonas fulva 12-X chromosome, complete genomeglycine oxidase ThiO1e-1584.3
NC_009085:1232890:125257312525731253529957Acinetobacter baumannii ATCC 17978, complete genomeD-amino-acid dehydrogenase2e-1584.3
NC_015724:339500:3540603540603551751116Cupriavidus necator N-1 plasmid BB2p, complete sequenceopine oxidase subunit B2e-1584
NC_020291:5409587:5419225541922554203521128Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeglycine/D-amino acid oxidase3e-1583.2
NC_012792:310443:3104433104433133972955Variovorax paradoxus S110 chromosome 2, complete genomeFAD dependent oxidoreductase4e-1582.8
NC_007948:4646344:4669711466971146708291119Polaromonas sp. JS666, complete genomeFAD dependent oxidoreductase8e-1582
NC_015942:1711026:1727085172708517281761092Acidithiobacillus ferrivorans SS3 chromosome, complete genomeFAD dependent oxidoreductase1e-1481.6
NC_009718:643200:6625756625756637471173Fervidobacterium nodosum Rt17-B1, complete genomeFAD dependent oxidoreductase2e-1480.9
NC_007948:4646344:4661759466175946628951137Polaromonas sp. JS666, complete genomeFAD dependent oxidoreductase3e-1479.7
NC_013947:4363250:4377230437723043784111182Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeFAD dependent oxidoreductase1e-1378.2
NC_008752:620802:6221756221756233471173Acidovorax avenae subsp. citrulli AAC00-1, complete genomeFAD dependent oxidoreductase1e-1378.2
NC_002754:824180:8413798413798424761098Sulfolobus solfataricus P2, complete genomeOxidoreductase, putative1e-1377.8
NC_014205:760428:7604287604287615701143Staphylothermus hellenicus DSM 12710 chromosome, complete genomeFAD dependent oxidoreductase2e-1377
NC_010623:1871492:1896546189654618977031158Burkholderia phymatum STM815 chromosome 2, complete sequenceFAD dependent oxidoreductase3e-1376.6
NC_008027:5842740:5844182584418258454321251Pseudomonas entomophila L48, complete genomehydrogen cyanide synthase HcnC5e-1376.3
NC_011901:3363500:3380830338083033819481119Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeglycine oxidase ThiO7e-1375.5
NC_012623:1405893:1415689141568914167861098Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeFAD dependent oxidoreductase9e-1375.1
NC_012632:1249334:1259325125932512604221098Sulfolobus islandicus M.16.27 chromosome, complete genomeFAD dependent oxidoreductase9e-1375.1
NC_021184:2936244:2944356294435629454771122Desulfotomaculum gibsoniae DSM 7213, complete genomeglycine/D-amino acid oxidase, deaminating1e-1274.7
NC_017276:1051707:1060469106046910615661098Sulfolobus islandicus REY15A chromosome, complete genomeFAD dependent oxidoreductase1e-1274.3
NC_012589:1241782:1248691124869112497881098Sulfolobus islandicus L.S.2.15, complete genomeFAD dependent oxidoreductase2e-1274.3
NC_017275:1189162:1196072119607211971691098Sulfolobus islandicus HVE10/4 chromosome, complete genomeFAD dependent oxidoreductase2e-1274.3
NC_014310:1822751:1848084184808418495381455Ralstonia solanacearum PSI07 megaplasmid, complete sequenceFAD-dependent oxidoreductase2e-1274.3
NC_017030:4588167:4606880460688046079951116Corallococcus coralloides DSM 2259 chromosome, complete genomeglycine oxidase ThiO2e-1273.9
NC_007492:3954345:3993694399369439949531260Pseudomonas fluorescens PfO-1, complete genomeFAD dependent oxidoreductase4e-1273.2
NC_012912:2998511:3003067300306730043981332Dickeya zeae Ech1591, complete genomeFAD dependent oxidoreductase7e-1272
NC_003413:1666520:1669331166933116704671137Pyrococcus furiosus DSM 3638, complete genomesarcosine oxidase, subunit beta2e-1170.9
NC_012214:1650523:1675995167599516773261332Erwinia pyrifoliae Ep1/96, complete genomeFAD dependent oxidoreductase3e-1170.1
NC_011144:2674242:2691607269160726927881182Phenylobacterium zucineum HLK1, complete genomeFAD dependent oxidoreductase3e-1169.7
NC_015172:1075592:1104747110474711058681122Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeGlycine oxidase4e-1169.7
NC_015136:2282488:2325858232585823270031146Burkholderia sp. CCGE1001 chromosome 1, complete sequenceFAD dependent oxidoreductase1e-1067.8
NC_007948:4558000:4583587458358745847171131Polaromonas sp. JS666, complete genomeFAD dependent oxidoreductase2e-1067.4
NC_012483:3731542:3798659379865937997921134Acidobacterium capsulatum ATCC 51196, complete genomeoxidoreductase, FAD-dependent4e-1066.2
NC_015474:301428:3036243036243047571134Pyrococcus sp. NA2 chromosome, complete genomesarcosine oxidase4e-1066.2
NC_010511:4313769:4313769431376943163002532Methylobacterium sp. 4-46 chromosome, complete genomeFAD dependent oxidoreductase4e-1066.2
NC_015425:2528549:2545129254512925465621434Clostridium botulinum BKT015925 chromosome, complete genomeFAD-dependent oxidoreductase6e-1065.9
NC_008593:2281896:2294825229482522962581434Clostridium novyi NT, complete genomeglycerol-3-phosphate dehydrogenase1e-0965.1
NC_000868:318434:3212723212723224111140Pyrococcus abyssi GE5, complete genomesarcosine oxidase, subunit beta2e-0963.9
NC_007516:2277910:2302913230291323039801068Synechococcus sp. CC9605, complete genomeputative thiamine biosynthesis oxidoreductase5e-0962.8
NC_020064:1854589:1854589185458918557041116Serratia marcescens FGI94, complete genomeglycine/D-amino acid oxidase, deaminating5e-0962.8
NC_000961:1532245:1534456153445615355891134Pyrococcus horikoshii OT3, complete genomesarcosine oxidase7e-0962.4
NC_019908:2312194:2323503232350323249421440Brachyspira pilosicoli P43/6/78 chromosome, complete genomedehydrogenase1e-0861.2
NC_016023:1769925:1802942180294218040631122Bacillus coagulans 36D1 chromosome, complete genomeFAD dependent oxidoreductase1e-0861.2
NC_008148:2498000:2507596250759625088371242Rubrobacter xylanophilus DSM 9941, complete genomeFAD dependent oxidoreductase2e-0861.2
NC_003910:2588000:2595357259535725966071251Colwellia psychrerythraea 34H, complete genomesarcosine oxidase, beta subunit2e-0860.8
NC_003910:4234000:4238988423898842402381251Colwellia psychrerythraea 34H, complete genomesarcosine oxidase, beta subunit2e-0860.8
NC_017243:3093393:3102673310267331041121440Brachyspira intermedia PWS/A chromosome, complete genomedehydrogenase3e-0860.1
NC_000918:465627:4835834835834846441062Aquifex aeolicus VF5, complete genomehypothetical protein3e-0860.1
NC_016642:1913432:1944993194499319461381146Pseudovibrio sp. FO-BEG1 chromosome, complete genomesarcosine oxidase, beta subunit family protein3e-0860.1
NC_018607:2231975:2239133223913322405721440Brachyspira pilosicoli B2904 chromosome, complete genomeputative dehydrogenase4e-0859.7
NC_014330:888366:8954888954888969271440Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative dehydrogenase4e-0859.7
NC_005773:5684000:5706494570649457076481155Pseudomonas syringae pv. phaseolicola 1448A, complete genomeoxidoreductase, FAD-binding6e-0859.3
NC_020829:809457:8109308109308120421113Pseudomonas denitrificans ATCC 13867, complete genomeFAD-dependent oxidoreductase8e-0858.9
NC_016051:241438:2441492441492453091161Thermococcus sp. AM4 chromosome, complete genomesarcosine oxidase subunit beta8e-0858.5
NC_009482:2051890:2068353206835320694951143Synechococcus sp. RCC307 chromosome, complete genomeglycine/D-amino acid oxidase family protein9e-0858.5
NC_007948:4558000:4579787457978745809141128Polaromonas sp. JS666, complete genomeFAD dependent oxidoreductase1e-0757.8
NC_005125:2269343:2288011228801122890661056Gloeobacter violaceus PCC 7421, complete genomeprobable oxidoreductase1e-0757.8
NC_015930:821342:8345548345548356661113Lactococcus garvieae ATCC 49156, complete genomeoxidoreductase2e-0757.4
NC_014654:1:1797717977194551479Halanaerobium sp. 'sapolanicus' chromosome, complete genomeFAD dependent oxidoreductase2e-0757.4
NC_012792:547967:577220577220577417198Variovorax paradoxus S110 chromosome 2, complete genome2e-0757
NC_012225:2247796:2256838225683822582771440Brachyspira hyodysenteriae WA1, complete genomePredicted dehydrogenase3e-0757
NC_018604:2350054:2357245235724523586841440Brachyspira pilosicoli WesB complete genomeputative dehydrogenase5e-0756.2
NC_019978:2036779:2044852204485220463841533Halobacteroides halobius DSM 5150, complete genomeputative dehydrogenase5e-0755.8
NC_014910:1912552:1933026193302619341861161Alicycliphilus denitrificans BC chromosome, complete genomefad dependent oxidoreductase8e-0755.5
NC_015875:1505034:1509768150976815108711104Streptococcus pseudopneumoniae IS7493 chromosome, complete genomeoxidoreductase, DadA family protein1e-0655.1
NC_015559:2745570:2763521276352127647681248Marinomonas posidonica IVIA-Po-181 chromosome, complete genomeSarcosine oxidase9e-0755.1
NC_015580:3779724:3782977378297737842991323Novosphingobium sp. PP1Y, complete genomeFAD dependent oxidoreductase9e-0755.1
NC_015376:2061990:208181920818192082019201Burkholderia gladioli BSR3 chromosome chromosome 2, complete9e-0755.1
NC_009481:2204629:2206182220618222073091128Synechococcus sp. WH 7803 chromosome, complete genomeglycine/D-amino acid oxidase family protein1e-0654.7
NC_015634:2694706:2697119269711926982401122Bacillus coagulans 2-6 chromosome, complete genomeFAD dependent oxidoreductase1e-0654.7
NC_018643:641360:6504746504746517271254Alpha proteobacterium HIMB5 chromosome, complete genomesarcosine oxidase, beta subunit family, heterotetrameric form2e-0654.3
NC_019973:5869500:5873692587369258761692478Mesorhizobium australicum WSM2073, complete genomeglycine cleavage system T protein (aminomethyltransferase)3e-0653.5
NC_014923:5940500:5944732594473259472092478Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeFAD dependent oxidoreductase3e-0653.5
NC_015675:6493444:6499403649940365018802478Mesorhizobium opportunistum WSM2075 chromosome, complete genomeFAD dependent oxidoreductase3e-0653.5
NC_015566:1941407:1941407194140719425311125Serratia sp. AS12 chromosome, complete genomeFAD dependent oxidoreductase6e-0652.8