Pre_GI: BLASTP Hits

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Query: NC_007953:938346:952384 Burkholderia xenovorans LB400 chromosome 3, complete sequence

Start: 952384, End: 952911, Length: 528

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015638:1824794:184131018413101841906597Lacinutrix sp. 5H-3-7-4 chromosome, complete genometransferase hexapeptide repeat containing protein4e-34144
NC_008027:2909000:292928129292812929880600Pseudomonas entomophila L48, complete genomeregulatory phaM protein7e-32136
NC_015733:2963548:298009929800992980644546Pseudomonas putida S16 chromosome, complete genomephenylacetic acid degradation protein PaaY7e-26116
NC_012622:1646000:166723216672321667741510Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeferripyochelin binding protein8e-23106
NC_013769:1705500:172839017283901728899510Sulfolobus islandicus L.D.8.5 chromosome, complete genomeferripyochelin binding protein8e-23106
NC_012588:1585808:160922716092271609736510Sulfolobus islandicus M.14.25 chromosome, complete genomeferripyochelin binding protein8e-23106
NC_012726:1611936:163535716353571635866510Sulfolobus islandicus M.16.4 chromosome, complete genomeferripyochelin binding protein8e-23106
NC_017186:9604427:960630496063049606822519Amycolatopsis mediterranei S699 chromosome, complete genomecarbonic anhydrase/acetyltransferase2e-22105
NC_014318:9604367:960624496062449606762519Amycolatopsis mediterranei U32 chromosome, complete genomecarbonic anhydrase/acetyltransferase2e-22105
NC_017276:1491473:151495315149531515462510Sulfolobus islandicus REY15A chromosome, complete genomeferripyochelin binding protein3e-22104
NC_017275:1635959:165943816594381659947510Sulfolobus islandicus HVE10/4 chromosome, complete genomeferripyochelin binding protein3e-22104
NC_007948:360199:380493380493381017525Polaromonas sp. JS666, complete genometransferase hexapeptide repeat4e-22103
NC_007963:3553678:355594835559483556475528Chromohalobacter salexigens DSM 3043, complete genometransferase hexapeptide repeat protein1e-21102
NC_014931:2336465:233800723380072338531525Variovorax paradoxus EPS chromosome, complete genomehypothetical protein2e-21101
NC_014355:243543:265304265304265843540Candidatus Nitrospira defluvii, complete genomeputative transferase3e-21101
NC_009379:1910891:192881819288181929342525Polynucleobacter sp. QLW-P1DMWA-1, complete genometransferase hexapeptide repeat8e-2199.8
NC_013926:920279:924475924475924987513Aciduliprofundum boonei T469 chromosome, complete genomeferripyochelin binding protein1e-2099
NC_014532:2664139:268069426806942681227534Halomonas elongata DSM 2581, complete genometransferase hexapeptide repeat4e-2097.4
NC_006510:2044347:206946520694652069986522Geobacillus kaustophilus HTA426, complete genomehypothetical protein7e-2096.7
NC_018664:1795223:181783618178361818339504Clostridium acidurici 9a chromosome, complete genomeputative carbonic anhydrase/acetyltransferase9e-2096.3
NC_010676:2658495:270214027021402702664525Burkholderia phytofirmans PsJN chromosome 2, complete sequencetransferase hexapeptide repeat containing protein1e-1995.9
NC_014220:481923:493536493536494069534Syntrophothermus lipocalidus DSM 12680 chromosome, complete genometransferase hexapeptide repeat containing protein3e-1994.7
NC_011894:3161289:317237731723773172922546Methylobacterium nodulans ORS 2060, complete genometransferase hexapeptide repeat containing protein7e-1993.2
NC_014364:2863686:286827428682742868792519Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeferripyochelin binding protein (fbp)2e-1891.7
NC_010623:1961685:200863420086342009158525Burkholderia phymatum STM815 chromosome 2, complete sequencetransferase hexapeptide repeat3e-1891.3
NC_004193:2342528:236254523625452363066522Oceanobacillus iheyensis HTE831, complete genomehypothetical protein6e-1890.1
NC_013407:1205747:122089812208981221365468Methanocaldococcus vulcanius M7, complete genomeferripyochelin binding protein (fbp)6e-1890.1
NC_015562:1299648:131886013188601319342483Methanotorris igneus Kol 5 chromosome, complete genomeferripyochelin binding protein6e-1890.1
NC_013172:3141739:316400031640003164518519Brachybacterium faecium DSM 4810, complete genomeisoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase1e-1789.4
NC_015977:2280834:229609722960972296603507Roseburia hominis A2-183 chromosome, complete genomeputative acetyltransferase protein1e-1789.4
NC_007513:1388641:139037413903741390922549Synechococcus sp. CC9902, complete genomepossible carbonic anhydrase1e-1789
NC_015458:3390674:340971434097143410235522Pusillimonas sp. T7-7 chromosome, complete genomehexapeptide repeat-containing transferase2e-1788.6
NC_008261:2117207:213973221397322140235504Clostridium perfringens ATCC 13124, complete genomebacterial transferase hexpeptide repeat protein2e-1788.2
NC_015314:89815:103878103878104399522Pseudonocardia dioxanivorans CB1190 plasmid pPSED01, completeisoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase3e-1787.8
NC_003901:2533000:256477225647722565317546Methanosarcina mazei Go1, complete genomehypothetical protein3e-1787.8
NC_010545:83353:101140101140101697558Corynebacterium urealyticum DSM 7109, complete genomegamma-type carbonic anhydratase-like protein7e-1786.7
NC_008262:1795914:181378118137811814284504Clostridium perfringens SM101, complete genomeferripyochelin binding protein8e-1786.7
NC_009725:2859630:289266728926672893185519Bacillus amyloliquefaciens FZB42, complete genomeYtoA1e-1685.9
NC_002570:207555:227291227291227818528Bacillus halodurans C-125, complete genomeferripyochelin binding protein2e-1685.5
NC_013124:1107202:111888611188861119404519Acidimicrobium ferrooxidans DSM 10331, complete genomehypothetical protein4e-1684.3
NC_011027:303000:320550320550321080531Chlorobaculum parvum NCIB 8327, complete genomeacetyltransferase, CysE/LacA/LpxA/NodL family5e-1684
NC_014935:1999653:202665320266532027186534Nitratifractor saLSUginis DSM 16511 chromosome, complete genomehexapeptide repeat-containing transferase1e-1582.8
NC_015711:6522808:654606465460646546579516Myxococcus fulvus HW-1 chromosome, complete genomehexapeptide repeat-containing transferase1e-1582.8
NC_009511:1781914:178191417819141782495582Sphingomonas wittichii RW1 chromosome, complete genomehexapaptide repeat-containing transferase9e-1682.8
NC_011004:4183993:419949941994994200029531Rhodopseudomonas palustris TIE-1, complete genomehypothetical protein1e-1582.4
NC_009613:2353185:236437423643742364892519Flavobacterium psychrophilum JIP02/86, complete genomecarbonic anhydrase/acetyltransferase family protein2e-1581.6
NC_014655:3615426:363116036311603631675516Leadbetterella byssophila DSM 17132 chromosome, complete genomecarbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein3e-1581.3
NC_008577:44184:498884988850436549Shewanella sp. ANA-3 chromosome 1, complete sequencecarbonic anhydrase, family 39e-1579.7
NC_016026:997225:102807810280781028605528Micavibrio aeruginosavorus ARL-13 chromosome, complete genomehexapeptide transferase family protein9e-1579.7
NC_008942:960306:977702977702978193492Methanocorpusculum labreanum Z, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase8e-1579.7
NC_010623:1871492:188327718832771884062786Burkholderia phymatum STM815 chromosome 2, complete sequencetransferase hexapeptide repeat containing protein1e-1479.3
NC_015510:4065753:406800640680064068521516Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomehexapeptide transferase family protein2e-1478.6
NC_002950:1270132:129094112909411291519579Porphyromonas gingivalis W83, complete genomehexapeptide transferase family protein2e-1478.6
NC_015571:1207000:122450812245081225047540Porphyromonas gingivalis TDC60, complete genomehexapeptide transferase family protein3e-1478.2
NC_009656:44500:728507285073392543Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein4e-1477.4
NC_013939:1535071:155011215501121550630519Deferribacter desulfuricans SSM1, complete genomeferripyochelin binding protein6e-1476.6
NC_014507:906960:939662939662940153492Methanoplanus petrolearius DSM 11571 chromosome, complete genomecarbonic anhydrase1e-1375.9
NC_007164:62816:747667476675323558Corynebacterium jeikeium K411, complete genomegamma-type carbonic anhydratase-like protein2e-1375.1
NC_005070:837567:860408860408860926519Synechococcus sp. WH 8102, complete genomepossible carbonic anhydrase3e-1374.3
NC_011832:2668337:266782326678232668344522Candidatus Methanosphaerula palustris E1-9c, complete genomehexapaptide repeat-containing transferase4e-1373.9
NC_015574:391869:399615399615400082468Methanobacterium sp. SWAN-1 chromosome, complete genomeferripyochelin binding protein9e-1373.2
NC_014297:1100997:112195011219501122468519Halalkalicoccus jeotgali B3 chromosome, complete genomehypothetical protein2e-1272
NC_009515:616432:634690634690635166477Methanobrevibacter smithii ATCC 35061, complete genomecarbonic anhydrase2e-1272
NC_008255:4208913:422438942243894224916528Cytophaga hutchinsonii ATCC 33406, complete genomeacetyltransferase/carbonic anhydrase1e-1169.3
NC_010067:4149298:415095341509534151507555Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-1168.6
NC_003901:2533000:255392125539212554466546Methanosarcina mazei Go1, complete genomecarbonic anhydrase5e-1167.4
NC_020054:765511:778198778198778617420Fibrella aestuarina BUZ 2 drat genomeCarbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein5e-1167.4
NC_006511:3364448:337886933788693379423555Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative transferase6e-1167
NC_017271:4473000:447353144735314474076546Xanthomonas campestris pv. raphani 756C chromosome, completetransferase2e-1065.1
NC_003902:396000:418386418386418946561Xanthomonas campestris pv. campestris str. ATCC 33913, completetransferase3e-1064.7
NC_007086:396723:418980418980419540561Xanthomonas campestris pv. campestris str. 8004, complete genometransferase3e-1064.7
CP002185:3627992:364220536422053642759555Escherichia coli W, complete genomeconserved protein3e-1064.7
NC_010688:387000:406228406228406788561Xanthomonas campestris pv. campestris, complete genomehypothetical protein4e-1064.3
NC_002695:4153394:416403241640324164802771Escherichia coli O157:H7 str. Sakai, complete genomeputative transferase4e-1064.3
NC_007503:1111457:114410311441031144642540Carboxydothermus hydrogenoformans Z-2901, complete genomehexapeptide transferase family protein2e-0962.4
NC_009792:923155:932235932235932762528Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-0962.4
NC_013282:3962188:397409839740983974655558Cronobacter turicensis, complete genomeProtein yrdA2e-0962
NC_014002:809816:829097829097829633537Methanohalophilus mahii DSM 5219 chromosome, complete genometransferase hexapeptide repeat containing protein3e-0858.2
NC_011729:1496848:1506143150614315081702028Cyanothece sp. PCC 7424 chromosome, complete genomecarbonate dehydratase4e-0857.8
NC_014735:1:203762037620894519Halogeometricum borinquense DSM 11551 plasmid pHBOR01, completeisoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase5e-0857.4
NC_014501:3210323:3220437322043732224492013Cyanothece sp. PCC 7822 chromosome, complete genomecarbonate dehydratase8e-0856.6
NC_011726:1665315:1673139167313916751392001Cyanothece sp. PCC 8801, complete genomeCarbonate dehydratase5e-0753.9
NC_020389:3142924:314503431450343145786753Methanosarcina mazei Tuc01, complete genomeCarbonic anhydrase4e-0650.8
NC_003901:3750000:375067837506783751409732Methanosarcina mazei Go1, complete genomecarbonic anhydrase5e-0650.4