Pre_GI: BLASTP Hits

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Query: NC_007953:1434705:1437243 Burkholderia xenovorans LB400 chromosome 3, complete sequence

Start: 1437243, End: 1438127, Length: 885

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008095:3785848:380368138036813804574894Myxococcus xanthus DK 1622, complete genomesenescence marker protein-30 family protein2e-64246
NC_016642:1990684:2006015200601520077391725Pseudovibrio sp. FO-BEG1 chromosome, complete genomeSMP-30/Gluconolaconase/LRE-like region2e-45182
NC_008254:3980327:399315439931543994023870Mesorhizobium sp. BNC1, complete genomeSMP-30/Gluconolaconase/LRE-like region1e-41170
NC_013037:6281164:633414563341456334990846Dyadobacter fermentans DSM 18053, complete genomeSMP-30/Gluconolaconase/LRE domain protein4e-41168
NC_015594:160848:165694165694166629936Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeSMP-30/gluconolaconase/LRE-like region-containing protein5e-41168
NC_010694:1250841:125232412523241253208885Erwinia tasmaniensis, complete genomeSenescence marker protein-301e-39163
NC_011884:1665888:168291016829101683791882Cyanothece sp. PCC 7425, complete genomeSMP-30/Gluconolaconase/LRE domain protein3e-38159
NC_014483:4772856:478969747896974790617921Paenibacillus polymyxa E681 chromosome, complete genomehypothetical protein1e-37157
NC_012214:1355500:135734813573481358232885Erwinia pyrifoliae Ep1/96, complete genomeSenescence marker protein-304e-37155
NC_015276:2804874:280487428048742805743870Marinomonas mediterranea MMB-1 chromosome, complete genomeSMP-30/Gluconolaconase/LRE-like region-containing protein2e-35149
NC_014532:2066074:206684520668452067750906Halomonas elongata DSM 2581, complete genomehypothetical protein1e-33144
NC_015563:1129469:115927611592761160178903Delftia sp. Cs1-4 chromosome, complete genomeSMP-30/gluconolaconase/LRE-like region-containing protein8e-33140
NC_009648:3192483:321218132121813213053873Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative cytoplasmic protein1e-32140
NC_013850:1198134:119726511972651198137873Klebsiella variicola At-22 chromosome, complete genomeSMP-30/Gluconolaconase/LRE domain protein2e-32139
NC_006905:2805877:282661528266152827523909Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein2e-31136
NC_011080:2789744:281190328119032812811909Salmonella enterica subsp. enterica serovar Newport str. SL254,SMP-30/Gluconolaconase/LRE domain protein3e-31135
NC_003198:2703013:272525827252582726166909Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-30132
NC_008752:261903:264256264256265227972Acidovorax avenae subsp. citrulli AAC00-1, complete genomeSMP-30/Gluconolaconase/LRE domain protein5e-30131
NC_015138:322386:328712328712329695984Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeSMP-30/Gluconolaconase/LRE-like region-containing protein4e-29129
NC_011663:2568190:257487725748772575869993Shewanella baltica OS223 chromosome, complete genomeSMP-30/gluconolaconase/LRE domain-containing protein5e-28124
NC_003063:757999:762037762037763005969Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein8e-28124
NC_003305:1297785:131175113117511312632882Agrobacterium tumefaciens str. C58 chromosome linear, completecalcium-binding protein, regucalcin9e-28124
NC_016612:5231065:526614252661425267002861Klebsiella oxytoca KCTC 1686 chromosome, complete genomeSMP-30/gluconolactonase/LRE family protein1e-27123
NC_002689:979191:980491980491981339849Thermoplasma volcanium GSS1, complete genomePredicted gluconolactonase3e-27122
NC_011959:1965158:196515819651581966039882Thermomicrobium roseum DSM 5159, complete genomeSenescence marker protein-30 (SMP-30)6e-26118
NC_008596:4043213:407896640789664079841876Mycobacterium smegmatis str. MC2 155, complete genomecalcium-binding protein1e-25117
NC_017955:3006500:301042430104243011266843Modestobacter marinus, complete genomegluconolactonase1e-24114
NC_009436:1679265:168114516811451682023879Enterobacter sp. 638, complete genomeSMP-30/gluconolaconase/LRE domain-containing protein4e-24112
NC_009921:593665:599466599466600350885Frankia sp. EAN1pec, complete genomeSMP-30/Gluconolaconase/LRE domain protein1e-23110
NC_009338:5052000:506997250699725070838867Mycobacterium gilvum PYR-GCK chromosome, complete genomeSMP-30/gluconolaconase/LRE domain-containing protein1e-22107
NC_014221:3175013:319032131903213191148828Truepera radiovictrix DSM 17093 chromosome, complete genomeSMP-30/Gluconolaconase/LRE domain protein5e-2098.6
NC_020209:47504:866218662187166546Pseudomonas poae RE*1-1-14, complete genomegluconolactonase3e-1789.4
NC_017904:3415700:344654734465473447209663Mycobacterium sp. MOTT36Y chromosome, complete genomeSMP-30/gluconolaconase/LRE domain-containing protein5e-1788.6
NC_008312:2690000:2695073269507326972952223Trichodesmium erythraeum IMS101, complete genomeSMP-30/Gluconolaconase/LRE-like region1e-1687.4
NC_014625:1903277:191891419189141919783870Ketogulonicigenium vulgare Y25 chromosome, complete genomecalcium-binding protein1e-1480.5
NC_008268:3418000:343800934380093438875867Rhodococcus sp. RHA1, complete genomeprobable 5-valerolactone hydrolase3e-1376.3
NC_009615:3146376:315450031545003155387888Parabacteroides distasonis ATCC 8503 chromosome, complete genomegluconolactonase9e-1374.3
NC_008268:3233961:324269932426993243568870Rhodococcus sp. RHA1, complete genomeprobable senescence marker protein-301e-1273.9
NC_015674:1562968:156478515647851565723939Helicobacter bizzozeronii CIII-1, complete genomegluconolactonase2e-1170.1
NC_008268:7180663:720604472060447206943900Rhodococcus sp. RHA1, complete genome5-valerolactone hydrolase3e-1169.7
NC_013947:4917711:493559849355984936506909Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeGluconolactonase2e-1169.7
NC_019904:334654:337464337464338357894Echinicola vietnamensis DSM 17526 chromosome, complete genomegluconolactonase7e-1168.2
NC_010086:1816378:181904218190421819971930Burkholderia multivorans ATCC 17616 chromosome 2, completeSMP-30/Gluconolaconase/LRE domain protein8e-1167.8
NC_010995:2312901:2312901231290123139291029Cellvibrio japonicus Ueda107, complete genomegluconolactonase precursor2e-1067
NC_012997:541648:544086544086544982897Teredinibacter turnerae T7901, complete genomeGluconolaconase domain protein3e-1065.9
NC_008577:1455000:148622614862261486606381Shewanella sp. ANA-3 chromosome 1, complete sequenceSmp-30/Cgr1 family protein3e-1065.9
NC_009482:1652329:166453216645321665440909Synechococcus sp. RCC307 chromosome, complete genomegluconolactonase5e-1065.5
NC_015656:3200500:321980732198073220694888Frankia symbiont of Datisca glomerata chromosome, complete genomeSMP-30/gluconolaconase/LRE-like region-containing protein4e-1065.5
NC_009648:4359875:4363260436326043642761017Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative outer membrane protein; gluconolactonase5e-1065.1
NC_011283:105245:1182381182381192541017Klebsiella pneumoniae 342 chromosome, complete genomeSMP-30/gluconolactonase/LRE family protein7e-1064.7
NC_013850:109500:1234341234341244501017Klebsiella variicola At-22 chromosome, complete genomeGluconolactonase7e-1064.7
NC_012731:5074000:5077439507743950784551017Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative outer membrane gluconolactonase7e-1064.7
NC_011566:1597751:160615216061521606994843Shewanella piezotolerans WP3, complete genomeCalcium binding transcriptional regulatory protein, putative1e-0860.8
NC_009380:725870:740014740014740937924Salinispora tropica CNB-440 chromosome, complete genomegluconolactonase1e-0860.8
NC_014830:335380:357682357682358581900Intrasporangium calvum DSM 43043 chromosome, complete genomegluconolactonase3e-0859.3
NC_007953:938346:9414449414449424721029Burkholderia xenovorans LB400 chromosome 3, complete sequencePutative gluconolactonase4e-0858.9
NC_002488:1638946:1661083166108316621531071Xylella fastidiosa 9a5c, complete genomehypothetical protein1e-0757
NC_009953:691686:713829713829714752924Salinispora arenicola CNS-205 chromosome, complete genomegluconolactonase3e-0755.8
NC_010625:1415500:144564014456401446470831Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceSMP-30/Gluconolaconase/LRE domain protein9e-0754.3
NC_008541:2037793:204063420406342041542909Arthrobacter sp. FB24 chromosome 1, complete sequenceSMP-30/Gluconolaconase/LRE domain protein9e-0754.3
NC_018581:4992952:501353050135305014450921Gordonia sp. KTR9 chromosome, complete genomeGluconolactonase1e-0653.9
NC_013526:530212:542144542144542971828Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeSMP-30/Gluconolaconase/LRE domain protein1e-0653.9
NC_013730:3863581:3880852388085238818801029Spirosoma linguale DSM 74, complete genomeGluconolactonase2e-0653.1