Pre_GI: BLASTP Hits

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Query: NC_007951:570500:574477 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 574477, End: 575163, Length: 687

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015677:2939301:296037829603782961055678Ramlibacter tataouinensis TTB310 chromosome, complete genomehypothetical protein1e-57222
NC_013960:3379515:338517133851713385836666Nitrosococcus halophilus Nc4 chromosome, complete genomeHAD-superfamily subfamily IB hydrolase, TIGR014902e-56218
NC_011761:684969:684969684969685661693Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeHAD-superfamily hydrolase5e-53207
NC_011206:863987:863987863987864679693Acidithiobacillus ferrooxidans ATCC 53993, complete genomeHAD-superfamily subfamily IB hydrolase, TIGR014905e-53207
NC_009512:5632591:568192156819215682577657Pseudomonas putida F1, complete genomeHAD-superfamily subfamily IB hydrolase, TIGR014907e-53206
NC_008789:942309:964198964198964881684Halorhodospira halophila SL1, complete genomeHAD-superfamily subfamily IB hydrolase, TIGR014907e-52203
NC_018080:4280401:430595043059504306603654Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein4e-39161
NC_008463:4389721:441518444151844415837654Pseudomonas aeruginosa UCBPP-PA14, complete genomePossible phosphoserine phosphatase1e-38159
NC_010524:3445641:345863134586313459308678Leptothrix cholodnii SP-6, complete genomeHAD-superfamily subfamily IB hydrolase, TIGR014909e-38156
NC_016002:2037374:207892820789282079596669Pseudogulbenkiania sp. NH8B, complete genomeHAD family hydrolase1e-33143
NC_018080:1730534:174928317492831749933651Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein2e-30132
NC_012731:1088321:110805311080531108718666Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomefamily IB HAD-hydrolase7e-29127
NC_011283:4438500:443862944386294439294666Klebsiella pneumoniae 342 chromosome, complete genomeHAD-superfamily hydrolase7e-29127
NC_005125:3420270:342027034202703421040771Gloeobacter violaceus PCC 7421, complete genomehypothetical protein1e-24112
NC_016628:1190366:121414412141441214803660Vibrio furnissii NCTC 11218 chromosome 2, complete sequenceHAD-superfamily hydrolase5e-23107
NC_006512:2789098:279357227935722794240669Idiomarina loihiensis L2TR, complete genomeProbable phosphoserine phosphatase, HAD-superfamily hydrolase5e-22104
NC_015061:2770856:279106027910602791773714Rahnella sp. Y9602 chromosome, complete genomeHAD-superfamily subfamily IB hydrolase, TIGR014903e-1995.5
NC_014391:421547:436794436794437600807Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeHAD-superfamily hydrolase7e-1890.9
NC_003155:5616000:562228656222865623119834Streptomyces avermitilis MA-4680, complete genomemorphological differentiation-associated protein8e-1890.5
NC_016114:3938721:394742439474243948263840Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeHAD-superfamily hydrolase8e-1890.5
NC_002944:4446083:445411044541104455021912Mycobacterium avium subsp. paratuberculosis K-10, complete genomeSerB1e-1790.1
NC_015656:2795784:2815207281520728175822376Frankia symbiont of Datisca glomerata chromosome, complete genomeHAD-superfamily hydrolase7e-1787.4
NC_016582:7101701:710170171017017102537837Streptomyces bingchenggensis BCW-1 chromosome, complete genomemorphological differentiation-associated protein3e-1582
NC_016906:3286384:3305667330566733071541488Gordonia polyisoprenivorans VH2 chromosome, complete genome1-acyl-sn-glycerol-3-phosphate acyltransferase3e-1581.6
NC_009921:4948500:4955996495599649583592364Frankia sp. EAN1pec, complete genomeHAD-superfamily subfamily IB hydrolase, TIGR014902e-1376.3
NC_008278:4023918:4031582403158240340172436Frankia alni ACN14a, complete genomePutative fatty acyl coA reductase6e-1374.3
NC_011768:3854455:385588038558803856542663Desulfatibacillum alkenivorans AK-01, complete genomeHAD-superfamily subfamily IB hydrolase, TIGR014902e-1272.8
NC_007777:2638580:2654498265449826569572460Frankia sp. CcI3, complete genomeHAD-superfamily subfamily IB, PSPase-like6e-1271.2
NC_010557:207846:207846207846208541696Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceHAD-superfamily subfamily IB hydrolase, TIGR014901e-1170.1
NC_009617:4946000:496786949678694968507639Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeHAD family hydrolase3e-0858.9
NC_020291:4944835:500548650054865006124639Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeHAD-superfamily subfamily IB hydrolase, TIGR014908e-0857.4
NC_012207:2747599:2745860274586027476021743Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative transmembrane phospholipid biosynthesis enzyme4e-0754.7
NC_002945:2757821:2756082275608227578241743Mycobacterium bovis AF2122/97, complete genomebifunctionnal putative L-3-phosphoserine phosphatase/1-acyl-SN-glycerol-3-phosphate acyltransferase4e-0754.7
NC_008769:2754828:2753089275308927548311743Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative transmembrane phospholipid biosynthesis bifunctionnal enzyme plsC: putative l-3-phosphoserine phosphatase + 1-ACYL-SN-GLYCEROL-3-PHOSPHATE AC4e-0754.7
NC_011979:589874:593387593387594106720Geobacter sp. FRC-32, complete genomeHAD-superfamily subfamily IB hydrolase, TIGR014906e-0754.7
NC_000962:2791019:2789280278928027910221743Mycobacterium tuberculosis H37Rv, complete genomePOSSIBLE TRANSMEMBRANE PHOSPHOLIPID BIOSYNTHESIS BIFUNCTIONNAL ENZYME PLSC: PUTATIVE L-3-PHOSPHOSERINE PHOSPHATASE (O-PHOSPHOSERINE PHOSPHOHYDROLASE) 9e-0753.9
NC_009525:2802987:2801248280124828029901743Mycobacterium tuberculosis H37Ra, complete genomebifunctional transmembrane phospholipid biosynthesis enzyme PlsC9e-0753.9
NC_010694:2716348:272023627202362720886651Erwinia tasmaniensis, complete genomeHAD-superfamily hydrolase, subfamily IB1e-0653.5
NC_016111:6175975:618444561844456185143699Streptomyces cattleya NRRL 8057, complete genomehypothetical protein9e-0650.4