Pre_GI: BLASTP Hits

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Query: NC_007492:3801237:3818863 Pseudomonas fluorescens PfO-1, complete genome

Start: 3818863, End: 3819786, Length: 924

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007492:3801237:381641738164173817334918Pseudomonas fluorescens PfO-1, complete genomeUspA2e-58226
NC_016830:3230939:323093932309393231829891Pseudomonas fluorescens F113 chromosome, complete genomeUniversal stress protein family 52e-36152
NC_007492:3801237:381465238146523815599948Pseudomonas fluorescens PfO-1, complete genomeuniversal stress protein family8e-31134
NC_017986:5797044:579944357994435800345903Pseudomonas putida ND6 chromosome, complete genomeUspA domain-containing protein1e-30134
NC_009512:2782000:280088428008842801774891Pseudomonas putida F1, complete genomeUspA domain protein1e-30133
NC_008258:1873805:187470918747091875659951Shigella flexneri 5 str. 8401, complete genomehypothetical protein4e-21102
NC_009792:1345500:136235213623521363302951Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-2099.8
NC_012214:1974500:201307320130732014023951Erwinia pyrifoliae Ep1/96, complete genomeUniversal stress protein YdaA9e-2097.8
NC_011080:1750000:175163217516321752579948Salmonella enterica subsp. enterica serovar Newport str. SL254,universal stress protein E9e-2097.8
NC_003197:1753663:175527717552771756224948Salmonella typhimurium LT2, complete genomeputative universal stress protein1e-1997.4
NC_011149:1429523:144690614469061447853948Salmonella enterica subsp. enterica serovar Agona str. SL483,universal stress protein E1e-1997.4
NC_006511:1273162:129054812905481291495948Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-1997.4
NC_011094:1726000:172845717284571729404948Salmonella enterica subsp. enterica serovar Schwarzengrund struniversal stress protein UspE1e-1997.4
NC_011147:1267005:128439112843911285338948Salmonella enterica subsp. enterica serovar Paratyphi A struniversal stress protein UspE1e-1997.4
NC_016810:1709695:171213017121301713077948Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-1997.4
NC_016856:1763640:176525417652541766201948Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Suniversal stress protein UspE1e-1997.4
NC_016857:1709695:171213017121301713077948Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74universal stress protein UspE1e-1997.4
NC_016860:1752000:175296817529681753915948Salmonella enterica subsp. enterica serovar Typhimurium struniversal stress protein UspE1e-1997.4
NC_016863:1711832:171344617134461714393948Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1universal stress protein UspE1e-1997.4
NC_017046:1709578:171201317120131712960948Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein1e-1997.4
NC_006905:1766000:176844317684431769390948Salmonella enterica subsp. enterica serovar Choleraesuis strputative universal stress protein2e-1997.1
NC_003198:1336894:135428913542891355236948Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-1996.7
NC_004631:1623511:162594616259461626893948Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-1996.7
NC_015761:1630000:164761716476171648564948Salmonella bongori NCTC 12419, complete genomehypothetical protein2e-1996.3
NC_012913:772641:782800782800783732933Aggregatibacter aphrophilus NJ8700, complete genomeUspA protein1e-1687
NC_009092:2282437:230575023057502306682933Shewanella loihica PV-4, complete genomeUspA domain protein7e-1684.7
NC_009052:2512373:255539525553952556327933Shewanella baltica OS155, complete genomeUspA domain protein1e-1377.4
NC_013416:1246880:125933612593361260268933Aggregatibacter actinomycetemcomitans D11S-1, complete genomeUspA protein5e-1375.1
NC_016513:1568401:158091015809101581842933Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeuniversal stress protein UspE6e-1375.1
NC_014315:1249071:126177912617791262711933Nitrosococcus watsoni C-113 chromosome, complete genomeUspA domain-containing protein3e-1066.2
NC_017986:5797044:580056458005645801442879Pseudomonas putida ND6 chromosome, complete genomeUspA domain-containing protein1e-0757.8
NC_009512:2782000:279978727997872800665879Pseudomonas putida F1, complete genomeUspA domain protein1e-0757.8
NC_016614:1178000:120977412097741210709936Vibrio sp. EJY3 chromosome 2, complete sequenceuniversal stress protein family 12e-0653.5