Pre_GI: BLASTP Hits

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Query: NC_007492:3180480:3197134 Pseudomonas fluorescens PfO-1, complete genome

Start: 3197134, End: 3198006, Length: 873

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016148:1877711:191410519141051914983879Thermovirga lienii DSM 17291 chromosome, complete genome2,3-dimethylmalate lyase5e-27121
NC_010718:2265447:227891622789162279785870Natranaerobius thermophilus JW/NM-WN-LF, complete genomecarboxyvinyl-carboxyphosphonate phosphorylmutase1e-23110
NC_015519:426948:440373440373441245873Tepidanaerobacter sp. Re1 chromosome, complete genomecarboxyvinyl-carboxyphosphonate phosphorylmutase1e-22107
NC_014374:1072218:118133711813371182281945Acidilobus saccharovorans 345-15 chromosome, complete genomePutative carboxyvinyl-carboxyphosphonate phosphorylmutase8e-22104
NC_014830:3438504:349655334965533497500948Intrasporangium calvum DSM 43043 chromosome, complete genomeisocitrate lyase and phosphorylmutase7e-21101
NC_003296:140889:140889140889141878990Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE CARBOXYVINYL-CARBOXYPHOSPHONATE PHOSPHORYLMUTASE PROTEIN5e-2098.2
NC_003106:1809137:182503918250391825785747Sulfolobus tokodaii str. 7, complete genomehypothetical carboxyvinyl-carboxyphosphonate phosphorylmutase3e-1995.9
NC_020911:3159290:317777531777753178677903Octadecabacter antarcticus 307, complete genomePrpB-like isocitrate lyase/phosphorylmutase-family protein4e-1995.5
NC_015387:155728:160876160876161775900Marinithermus hydrothermalis DSM 14884 chromosome, complete genomemethylisocitrate lyase4e-1995.5
NC_014310:94645:946459464595541897Ralstonia solanacearum PSI07 megaplasmid, complete sequencemethylisocitrate lyase5e-1995.1
NC_005877:198522:197675197675198529855Picrophilus torridus DSM 9790, complete genomemethylisocitrate lyase5e-1995.1
NC_020908:823589:841317841317842147831Octadecabacter arcticus 238, complete genomeisocitrate lyase/phosphorylmutase family protein9e-1994.4
NC_015499:1097432:111266311126631113541879Thermodesulfobium narugense DSM 14796 chromosome, complete genomeCarboxyvinyl-carboxyphosphonatephosphorylmutase8e-1994.4
NC_012721:2694829:269610026961002696993894Burkholderia glumae BGR1 chromosome 2, complete genomeMethylisocitrate lyase8e-1994.4
NC_009440:217547:239047239047239871825Metallosphaera sedula DSM 5348 chromosome, complete genome2,3-dimethylmalate lyase1e-1894
NC_018750:6070260:607339460733946074299906Streptomyces venezuelae ATCC 10712, complete genomeMethylisocitrate lyase2e-1789.7
NC_003364:1081846:1106809110680911078581050Pyrobaculum aerophilum str. IM2, complete genomeisocitrate lyase2e-1686.7
NC_011772:2166000:217496321749632175871909Bacillus cereus G9842, complete genomemethylisocitrate lyase7e-1684.7
NC_009342:841500:861227861227862150924Corynebacterium glutamicum R chromosome, complete genomehypothetical protein1e-1584
NC_011725:2206000:221539822153982216306909Bacillus cereus B4264 chromosome, complete genomemethylisocitrate lyase1e-1584
NC_014171:2177353:218754221875422188450909Bacillus thuringiensis BMB171 chromosome, complete genomemethylisocitrate lyase1e-1584
NC_003997:2175843:218503421850342185942909Bacillus anthracis str. Ames, complete genomecarboxyvinyl-carboxyphosphonate phosphorylmutase2e-1583.6
NC_007530:2175967:218515821851582186066909Bacillus anthracis str. 'Ames Ancestor', complete genomecarboxyvinyl-carboxyphosphonate phosphorylmutase2e-1583.6
NC_005945:2175871:218514021851402186048909Bacillus anthracis str. Sterne, complete genomecarboxyvinyl-carboxyphosphonate phosphorylmutase2e-1583.6
NC_012659:2175867:218505821850582185966909Bacillus anthracis str. A0248, complete genomemethylisocitrate lyase2e-1583.6
NC_014335:2151404:216132621613262162234909Bacillus cereus biovar anthracis str. CI chromosome, completecarboxyvinyl-carboxyphosphonate phosphorylmutase1e-1583.6
NC_005957:2196000:220468922046892205597909Bacillus thuringiensis serovar konkukian str. 97-27, completecarboxyvinyl-carboxyphosphonate phosphorylmutase; possible methylisocitrate lyase1e-1583.6
NC_012472:2240000:224880622488062249714909Bacillus cereus 03BB102, complete genomemethylisocitrate lyase1e-1583.6
NC_011773:2239753:224898822489882249896909Bacillus cereus AH820 chromosome, complete genomemethylisocitrate lyase1e-1583.6
NC_011658:2275864:228447922844792285387909Bacillus cereus AH187 chromosome, complete genomemethylisocitrate lyase1e-1583.6
NC_016112:3840053:384237238423723843226855Methylomicrobium alcaliphilum chromosome, complete genomecarboxyvinyl-carboxyphosphonate phosphorylmutase4e-1582
NC_019940:2931500:295768229576822958569888Thioflavicoccus mobilis 8321 chromosome, complete genomemethylisocitrate lyase1e-1480.9
NC_015656:3200500:320279432027943203687894Frankia symbiont of Datisca glomerata chromosome, complete genomemethylisocitrate lyase1e-1480.5
NC_008319:2335801:235191323519132352797885Synechococcus sp. CC9311, complete genomeCarboxyvinyl-carboxyphosphonate phosphorylmutase(Carboxyphosphonoenolpyruvate phosphonomutase)1e-1480.1
NC_014618:1452927:145567714556771456558882Enterobacter cloacae SCF1 chromosome, complete genomemethylisocitrate lyase4e-1478.6
NC_013205:854983:873581873581874504924Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,methylisocitrate lyase8e-1477.8
NC_015733:2658337:268723426872342688133900Pseudomonas putida S16 chromosome, complete genome2-methylisocitrate lyase2e-1377
NC_004917:366104:384535384535385410876Helicobacter hepaticus ATCC 51449, complete genomecarboxyphosphoenolpyruvate phosphomutase PrpB1e-1377
NC_021150:2315362:231608123160812316968888Azotobacter vinelandii CA6, complete genome2-methylisocitrate lyase1e-1377
NC_012560:2315350:231606923160692316956888Azotobacter vinelandii DJ, complete genomemethylisocitrate lyase1e-1377
NC_012982:1569426:158378915837891584643855Hirschia baltica ATCC 49814, complete genome2,3-dimethylmalate lyase2e-1376.6
NC_014831:2397563:240191924019192402866948Thermaerobacter marianensis DSM 12885 chromosome, complete genomemethylisocitrate lyase4e-1375.5
NC_014394:93344:110946110946111833888Gallionella capsiferriformans ES-2 chromosome, complete genomemethylisocitrate lyase8e-1374.7
NC_014479:188009:208395208395209285891Bacillus subtilis subsp. spizizenii str. W23 chromosome, completephosphoenolpyruvate mutase2e-1273.2
NC_014297:1100997:1115159111515911162231065Halalkalicoccus jeotgali B3 chromosome, complete genomeisocitrate lyase5e-1272
NC_014484:1690272:1702878170287817044731596Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein6e-1271.6
NC_016816:2684336:269375526937552694660906Pantoea ananatis LMG 5342, complete genomephosphoenolpyruvate phosphomutase3e-0962.8
NC_007925:4294472:430280343028034303762960Rhodopseudomonas palustris BisB18, complete genomePhosphoenolpyruvate phosphomutase3e-0756.2
NC_015138:2364500:236898623689862369936951Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completephosphoenolpyruvate phosphomutase3e-0755.8
NC_020209:397376:427331427331428200870Pseudomonas poae RE*1-1-14, complete genomephosphoenolpyruvate phosphomutase1e-0653.9
NC_007954:1324062:1335400133540013370371638Shewanella denitrificans OS217, complete genomePhosphoenolpyruvate phosphomutase2e-0653.5