Pre_GI: BLASTP Hits

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Query: NC_007333:1743890:1780470 Thermobifida fusca YX, complete genome

Start: 1780470, End: 1781141, Length: 672

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017904:2641270:264678226467822647450669Mycobacterium sp. MOTT36Y chromosome, complete genomeenoyl-CoA hydratase6e-53207
NC_014974:758129:778424778424779185762Thermus scotoductus SA-01 chromosome, complete genomeenoyl-CoA hydratase/isomerase6e-1270.9
NC_016830:4809210:482411848241184824807690Pseudomonas fluorescens F113 chromosome, complete genomeEnoyl-CoA hydratase/isomerase family protein1e-1170.1
NC_004129:2034500:204108120410812041770690Pseudomonas fluorescens Pf-5, complete genomeenoyl-CoA hydratase1e-1169.7
NC_007005:2149275:215037021503702151059690Pseudomonas syringae pv. syringae B728a, complete genomeenoyl-CoA hydratase3e-1168.6
NC_014539:743523:749271749271750032762Burkholderia sp. CCGE1003 chromosome 1, complete sequenceenoyl-CoA hydratase/isomerase1e-1067
NC_018644:137755:149074149074149868795Alpha proteobacterium HIMB59 chromosome, complete genomeenoyl-CoA hydratase family protein4e-1065.1
NC_012660:5121219:513534451353445136036693Pseudomonas fluorescens SBW25 chromosome, complete genomeenoyl-CoA hydratase3e-0962
NC_009439:2337024:233702423370242337713690Pseudomonas mendocina ymp, complete genomeenoyl-CoA hydratase8e-0960.5
NC_015563:4206112:421556942155694216345777Delftia sp. Cs1-4 chromosome, complete genomeenoyl-CoA hydratase/isomerase1e-0859.7
NC_020291:491000:501608501608502393786Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome3-hydroxybutyryl-CoA dehydratase Crt2e-0859.7
NC_004557:2552418:256657725665772567359783Clostridium tetani E88, complete genomeenoyl-CoA hydratase2e-0859.3
NC_014540:2908912:290891229089122909673762Burkholderia sp. CCGE1003 chromosome 2, complete sequenceenoyl-CoA hydratase/isomerase2e-0858.9
NC_014830:3438504:346499934649993465856858Intrasporangium calvum DSM 43043 chromosome, complete genomeEnoyl-CoA hydratase/isomerase4e-0858.2
NC_015573:2900906:292488929248892925674786Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genome3-hydroxybutyryl-CoA dehydratase6e-0857.8
NC_015410:2838132:286070628607062861395690Pseudomonas mendocina NK-01 chromosome, complete genomeenoyl-CoA hydratase6e-0857.8
NC_013316:891782:899515899515900330816Clostridium difficile R20291, complete genome3-hydroxybutyryl-CoA dehydratase (crotonase)1e-0757
NC_013315:895500:901900901900902715816Clostridium difficile CD196 chromosome, complete genome3-hydroxybutyryl-CoA dehydratase1e-0757
NC_017179:905347:911698911698912492795Clostridium difficile BI1, complete genome3-hydroxybutyryl-CoA dehydratase1e-0757
NC_008570:2216736:226500222650022265808807Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeenoyl-CoA hydratase/isomerase family protein1e-0757
NC_003364:1463317:148142114814211482269849Pyrobaculum aerophilum str. IM2, complete genomeenoyl-CoA hydratase9e-0857
NC_009089:965959:972321972321973103783Clostridium difficile 630, complete genome3-hydroxybutyryl-CoA dehydratase (crotonase)1e-0757
NC_010617:558954:558127558127558957831Kocuria rhizophila DC2201, complete genomeputative enoyl-CoA hydratase1e-0756.6
NC_003106:51854:646466464665410765Sulfolobus tokodaii str. 7, complete genomehypothetical enoyl-CoA hydratase1e-0756.2
NC_009617:385000:387416387416388201786Clostridium beijerinckii NCIMB 8052 chromosome, complete genome3-hydroxybutyryl-CoA dehydratase1e-0756.2
NC_014259:3984568:400603540060354006808774Acinetobacter sp. DR1 chromosome, complete genomeenoyl-CoA hydratase2e-0755.5
NC_010516:3466000:347929234792923480074783Clostridium botulinum B1 str. Okra, complete genome3-hydroxybutyryl-CoA dehydratase3e-0755.5
NC_013440:1480855:149915014991501499920771Haliangium ochraceum DSM 14365, complete genomeEnoyl-CoA hydratase/isomerase3e-0755.1
NC_020410:1684192:170396817039681704717750Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completepolyketide biosynthesis enoyl-CoA hydratase3e-0755.1
NC_015576:3976679:403398640339864034756771Mycobacterium sp. JDM601 chromosome, complete genomeenoyl-CoA hydratase EchA86e-0754.3
NC_002570:207555:223362223362224141780Bacillus halodurans C-125, complete genomeRNA-binding protein/enoyl-CoA hydratase6e-0754.3
NC_014472:3530274:354031935403193541092774Flavobacteriales bacterium HTCC2170 chromosome, complete genomehypothetical protein1e-0653.5
NC_014831:2082304:209810320981032098882780Thermaerobacter marianensis DSM 12885 chromosome, complete genomeEnoyl-CoA hydratase/isomerase1e-0653.5
NC_013791:2273389:228191722819172282699783Bacillus pseudofirmus OF4 chromosome, complete genomeenoyl-CoA hydratase1e-0653.1
NC_021182:1473535:147941914794191480207789Clostridium pasteurianum BC1, complete genomeenoyl-CoA hydratase/carnithine racemase1e-0653.1
NC_015593:158107:185248185248186021774Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeenoyl-CoA hydratase/isomerase1e-0653.1
NC_009617:2355662:236399423639942364779786Clostridium beijerinckii NCIMB 8052 chromosome, complete genome3-hydroxybutyryl-CoA dehydratase2e-0652.8
NC_007517:2494000:250360325036032504391789Geobacter metallireducens GS-15, complete genomeEnoyl-CoA hydratase/isomerase2e-0652.4
NC_015424:2462522:248032624803262481132807Aeromonas veronii B565 chromosome, complete genomeenoyl-CoA hydratase/isomerase family protein3e-0652.4
NC_012588:800942:806078806078806842765Sulfolobus islandicus M.14.25 chromosome, complete genomeenoyl-CoA hydratase/isomerase3e-0652
NC_012632:884811:891400891400892164765Sulfolobus islandicus M.16.27 chromosome, complete genomeEnoyl-CoA hydratase/isomerase3e-0652
NC_012880:1613485:16313061631306164274111436Dickeya dadantii Ech703, complete genomeFkbH like protein5e-0651.6
NC_002570:1220180:123177012317701232552783Bacillus halodurans C-125, complete genomeenoyl-CoA hydratase5e-0651.2
NC_017506:1:605126051261312801Marinobacter adhaerens HP15 chromosome, complete genomeenoyl-CoA hydratase/isomerase8e-0650.8
NC_015312:681678:702173702173702925753Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeenoyl-CoA hydratase/isomerase8e-0650.4