Pre_GI: BLASTP Hits

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Query: NC_006347:2190000:2192260 Bacteroides fragilis YCH46, complete genome

Start: 2192260, End: 2192703, Length: 444

Host Lineage: Bacteroides fragilis; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This organism can become an opportunistic pathogen, infecting anywhere in the body and causing abcess formation. Enterotoxigenic Bacterioides fragilis (ETBF) is associated with diarrheal diseases. This strain was isolated from a patient with septicemia in Japan. Common gut bacterium. This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Although only a minor component of the human gut microflora, this organism is a major component of clinical specimens and is the most common anaerobe isolated.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016776:2237404:224094922409492241392444Bacteroides fragilis 638R, complete genomeputative UmuD/RumA DNA repair protein7e-82301
NC_003228:2245181:224994922499492250386438Bacteroides fragilis NCTC 9343, complete genomeputative UmuD/RumA DNA repair protein6e-79291
NC_008255:1701195:171908717190871719515429Cytophaga hutchinsonii ATCC 33406, complete genomepeptidase, S24 family, UV repair protein1e-39161
NC_015167:1154497:115575611557561156190435Cellulophaga lytica DSM 7489 chromosome, complete genomepeptidase S24/S26A/S26B1e-39161
NC_012108:442493:456512456512456931420Desulfobacterium autotrophicum HRM2, complete genomeUmuD14e-32136
NC_011283:3177350:318657131865713187053483Klebsiella pneumoniae 342 chromosome, complete genomeDNA polymerase V subunit UmuD3e-29127
NC_009648:1541699:159551215955121595931420Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeDNA polymerase V subunit UmuD2e-29127
NC_011283:2836000:289026328902632890745483Klebsiella pneumoniae 342 chromosome, complete genomeDNA polymerase V subunit UmuD2e-29127
NC_006576:2683467:709970997659561Synechococcus elongatus PCC 6301, complete genomeDNA polymerase V6e-29126
NC_007604:1586243:160612916061291606689561Synechococcus elongatus PCC 7942, complete genomeDNA polymerase V6e-29126
NC_010554:2646806:272478627247862725235450Proteus mirabilis HI4320, complete genomeDNA repair protein1e-28125
NC_009436:2056000:206974720697472070181435Enterobacter sp. 638, complete genomeprophage repressor8e-29125
NC_009792:1739970:174737317473731747789417Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-28124
NC_012967:1205985:123091712309171231336420Escherichia coli B str. REL606 chromosome, complete genomeDNA polymerase V subunit UmuD7e-28122
NC_011751:1446073:147704214770421477461420Escherichia coli UMN026 chromosome, complete genomeDNA polymerase V subunit UmuD7e-28122
NC_008253:1228485:125123812512381251657420Escherichia coli 536, complete genomeUmuD protein7e-28122
NC_009801:1296488:132144813214481321867420Escherichia coli E24377A, complete genomeprotein UmuD7e-28122
NC_010473:1245284:127023112702311270650420Escherichia coli str. K-12 substr. DH10B, complete genomeDNA polymerase V, subunit D7e-28122
NC_011745:1287714:131060513106051311024420Escherichia coli ED1a chromosome, complete genomeDNA polymerase V subunit UmuD1e-27122
NC_009436:2395913:240450524045052404924420Enterobacter sp. 638, complete genomeDNA polymerase V subunit UmuD1e-27121
NC_012668:3037345:303929130392913039740450Vibrio cholerae MJ-1236 chromosome 1, complete sequenceerror-prone repair protein UmuD1e-27121
NC_016445:89500:106849106849107298450Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeDNA polymerase V1e-27121
NC_011742:1221416:124553912455391245958420Escherichia coli S88 chromosome, complete genomeDNA polymerase V subunit UmuD2e-27120
NC_004431:1443968:146808314680831468502420Escherichia coli CFT073, complete genomeUmuD protein2e-27120
NC_004631:948054:981317981317981736420Salmonella enterica subsp. enterica serovar Typhi Ty2, completeUmuD protein4e-27120
NC_016002:1741109:175018817501881750616429Pseudogulbenkiania sp. NH8B, complete genomepeptidase S24 and S26 domain containing protein8e-27119
NC_016002:2179969:218853921885392188967429Pseudogulbenkiania sp. NH8B, complete genomepeptidase S24 and S26 domain containing protein8e-27119
NC_021066:1778000:178527517852751785694420Raoultella ornithinolytica B6, complete genomeDNA polymerase V subunit UmuD8e-27119
NC_016810:2027311:203873120387312039150420Salmonella enterica subsp. enterica serovar Typhimurium strDNA repair protein7e-27119
NC_016856:2085283:209256820925682092987420Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SDNA polymerase V subunit UmuD7e-27119
NC_016857:2027311:203873120387312039150420Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74DNA polymerase V subunit UmuD7e-27119
NC_016863:2029340:204076020407602041179420Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1DNA polymerase V subunit UmuD7e-27119
NC_015703:4483500:451653045165304516979450Runella slithyformis DSM 19594 chromosome, complete genomepeptidase S24/S26A/S26B, conserved region5e-27119
NC_015424:2726223:276526527652652765627363Aeromonas veronii B565 chromosome, complete genomepeptidase S24-like domain-containing protein5e-27119
NC_008740:1357312:136883113688311369268438Marinobacter aquaeolei VT8, complete genomeputative prophage repressor5e-27119
NC_011601:1315746:133733613373361337755420Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeDNA polymerase V subunit UmuD1e-26118
NC_016514:2476359:248828724882872488781495Enterobacter cloacae EcWSU1 chromosome, complete genomeUmuD1e-26118
NC_014733:1223359:123140312314031231840438Methylovorus sp. MP688 chromosome, complete genomepeptidase s24 and s26 domain protein3e-26117
NC_007516:1086948:110718511071851107616432Synechococcus sp. CC9605, complete genomeputative SOS mutagenesis protein UmuD3e-26117
NC_015970:19850:238292382924263435Rhodothermus marinus SG0.5JP17-172 plasmid pRHOM17201, completepeptidase S24/S26A/S26B8e-26115
NC_008570:2216736:225027522502752250697423Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeumuD protein6e-26115
NC_012969:1574330:159093015909301591391462Methylovorus glucosetrophus SIP3-4 chromosome, complete genomepeptidase S24 and S26 domain-containing protein3e-25114
NC_009927:253250:254670254670255101432Acaryochloris marina MBIC11017 plasmid pREB2, complete sequenceSOS mutagenesis protein UmuD, putative5e-25113
NC_005071:671084:688212688212688706495Prochlorococcus marinus str. MIT 9313, complete genomeputative SOS mutagenesis protein UmuD8e-25112
NC_003198:4453457:44737534473753450773033978Salmonella enterica subsp. enterica serovar Typhi str. CT18,4e-24110
NC_017047:1934430:194357819435781944000423Rahnella aquatilis HX2 chromosome, complete genomeDNA polymerase V subunit UmuD6e-24109
NC_015566:3269469:328448832844883284913426Serratia sp. AS12 chromosome, complete genomepeptidase S24/S26A/S26B7e-24109
NC_011761:1499500:151324615132461513740495Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeumuD protein1e-23108
NC_008570:1143578:116544011654401165883444Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeprotein UmuD1e-23108
NC_007626:2204767:224721922472192247689471Magnetospirillum magneticum AMB-1, complete genomeSOS-response transcriptional repressors1e-23108
NC_008341:29038:461294612946572444Nitrosomonas eutropha C91 plasmid1, complete sequenceputative prophage repressor9e-24108
NC_020260:1293860:130024713002471300684438Cronobacter sakazakii Sp291, complete genomeDNA polymerase V subunit UmuD4e-23107
NC_005966:2653945:267389626738962674522627Acinetobacter sp. ADP1, complete genomecomponent of DNA polymerase V3e-23107
NC_014532:3596097:362965336296533630096444Halomonas elongata DSM 2581, complete genomehypothetical protein2e-23107
NC_015424:3520783:355284035528403553283444Aeromonas veronii B565 chromosome, complete genomeprotein UmuD2e-23107
NC_012559:1497548:152788615278861528506621Laribacter hongkongensis HLHK9, complete genomeUmuD protein2e-23107
NC_013282:1842412:184946718494671849934468Cronobacter turicensis, complete genomeProtein umuD4e-23106
NC_011881:1:390939094340432Arthrobacter chlorophenolicus A6 plasmid pACHL02, completepeptidase S24 and S26 domain protein5e-23106
NC_015761:1599000:160588716058871606315429Salmonella bongori NCTC 12419, complete genomeDNA repair protein6e-23106
NC_009453:36599:513145131451745432Arthrobacter sp. Rue61a plasmid pAL1, complete sequenceputative UmuD-like protein6e-23106
NC_014394:2577949:258904525890452589485441Gallionella capsiferriformans ES-2 chromosome, complete genomePeptidase S24/S26A/S26B, conserved region1e-22105
NC_015572:2186394:218769221876922188171480Methylomonas methanica MC09 chromosome, complete genomepeptidase S24/S26A/S26B1e-22105
NC_014304:77715:878618786188307447Erwinia billingiae Eb661 plasmid pEB102, complete sequenceProtein SamA2e-22104
NC_011662:2320100:233366623336662334121456Thauera sp. MZ1T, complete genomepeptidase S24 and S26 domain protein4e-22103
NC_014305:97055:112117112117112545429Erwinia billingiae Eb661 plasmid pEB170, complete sequenceDNA polymerase V subunit5e-22103
NC_006856:95830:100863100863101300438Salmonella enterica subsp. enterica serovar Choleraesuis strImpA1e-21102
NC_007941:11319:558295582956266438Escherichia coli UTI89 plasmid pUTI89, complete sequenceUV protection and mutation protein8e-22102
NC_010725:356609:361808361808362272465Methylobacterium populi BJ001, complete genomepeptidase S24 and S26 domain protein2e-21100
NC_014842:19411:458674586746373507Pantoea sp. At-9b plasmid pPAT9B05, complete sequencepeptidase S24/S26A/S26B4e-21100
NC_015410:2351464:238028123802812380712432Pseudomonas mendocina NK-01 chromosome, complete genomeprotein MucA4e-21100
NC_011757:276953:292315292315292770456Methylobacterium chloromethanicum CM4, complete genomepeptidase S24 and S26 domain protein7e-2199.4
NC_020064:1962172:197446219744621974884423Serratia marcescens FGI94, complete genomeSOS response transcriptional repressor, RecA-mediated autopeptidase2e-2097.8
NC_007963:1552761:156563415656341566074441Chromohalobacter salexigens DSM 3043, complete genomeputative prophage repressor2e-2097.4
NC_016609:8251438:825282782528278253261435Niastella koreensis GR20-10 chromosome, complete genomeSOS response UmuD protein3e-1994
NC_016816:4129299:417061241706124171037426Pantoea ananatis LMG 5342, complete genomeUV protection protein3e-1994
NC_010510:534024:541392541392541844453Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completepeptidase S24 and S26 domain protein3e-1994
NC_012988:4262631:426666942666694267061393Methylobacterium extorquens DM4, complete genomeDNA polymerase V subunit D8e-1992.4
NC_013716:4306695:433331543333154333674360Citrobacter rodentium ICC168, complete genomeputative SOS response protein9e-1992.4
NC_013446:2961647:297934429793442979754411Comamonas testosteroni CNB-2, complete genomeDNA polymerase V6e-1786.3
NC_020911:1859210:188108418810841881518435Octadecabacter antarcticus 307, complete genomeUV-repair and mutation protein UmuD8e-1785.9
NC_003197:2327474:233096123309612331431471Salmonella typhimurium LT2, complete genomeDNA polymerase V subunit7e-1785.9
NC_016810:2325190:232867723286772329147471Salmonella enterica subsp. enterica serovar Typhimurium strDNA polymerase V subunit7e-1785.9
NC_016856:2379027:238251423825142382984471Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SDNA polymerase V subunit7e-1785.9
NC_016857:2325190:232867723286772329147471Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74DNA polymerase V subunit7e-1785.9
NC_009436:1141376:115397511539751154361387Enterobacter sp. 638, complete genomeDNA polymerase V subunit1e-1685.5
NC_016863:2324293:233070623307062331209504Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1DNA polymerase V subunit1e-1685.1
NC_016830:3869572:387722238772223877647426Pseudomonas fluorescens F113 chromosome, complete genomeprotein UmuD1e-1685.1
NC_014323:3976351:398335939833593983784426Herbaspirillum seropedicae SmR1 chromosome, complete genomeSOS mutagenesis protein1e-1685.1
NC_011894:585637:622354622354622869516Methylobacterium nodulans ORS 2060, complete genomepeptidase S24 and S26 domain protein2e-1684.3
NC_011083:2375061:237854823785482379219672Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,DNA polymerase V subunit3e-1684
NC_010102:683444:714177714177714848672Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-1684
NC_016860:2323017:232650423265042327175672Salmonella enterica subsp. enterica serovar Typhimurium strDNA polymerase V subunit UmuD3e-1684
NC_010334:2615260:262260426226042623011408Shewanella halifaxensis HAW-EB4, complete genomepeptidase S24 and S26 domain protein4e-1683.6
NC_010334:2615260:264279526427952643202408Shewanella halifaxensis HAW-EB4, complete genomepeptidase S24 and S26 domain protein4e-1683.2
NC_011894:4013830:401775640177564018211456Methylobacterium nodulans ORS 2060, complete genomepeptidase S24 and S26 domain protein5e-1683.2
NC_011894:7109374:711828971182897118744456Methylobacterium nodulans ORS 2060, complete genomepeptidase S24 and S26 domain protein5e-1683.2
NC_004129:5373886:542090954209095421361453Pseudomonas fluorescens Pf-5, complete genomeultraviolet light resistance protein A7e-1682.8
NC_009052:4168776:417661141766114177018408Shewanella baltica OS155, complete genomeputative prophage repressor6e-1682.8
NC_004459:349500:370238370238370651414Vibrio vulnificus CMCP6 chromosome I, complete sequenceSOS-response transcriptional repressor LexA -like protein2e-1580.9
NC_009512:5632591:565849256584925658920429Pseudomonas putida F1, complete genomeputative prophage repressor5e-1579.7
NC_015851:10915:328603286033324465Acidithiobacillus caldus SM-1 megaplasmid, complete sequenceSOS-response repressor and protease LexA5e-1579.7
NC_009434:3611738:363139136313913631822432Pseudomonas stutzeri A1501, complete genomeultraviolet light resistance protein A1e-1479
NC_015731:2460248:246163624616362462241606Nitrosomonas sp. Is79A3 chromosome, complete genomepeptidase S24/S26A/S26B2e-1477.4
NC_015222:2475792:249340424934042494024621Nitrosomonas sp. AL212 chromosome, complete genomepeptidase S24/S26A/S26B, conserved region3e-1477.4
NC_020418:2868000:288122828812282881533306Morganella morganii subsp. morganii KT, complete genomeError-prone repair protein UmuD2e-1374.7
NC_004349:3938:113351133511739405Shewanella oneidensis MR-1 plasmid pMR-1, complete sequenceSOS mutagenesis protein RulA2e-1374.7
NC_014910:1912552:191889019188901919375486Alicycliphilus denitrificans BC chromosome, complete genomepeptidase s24/s26a/s26b, conserved region protein2e-1374.3
NC_014910:1591003:160300516030051603586582Alicycliphilus denitrificans BC chromosome, complete genomelexa repressor9e-1372.4
NC_014910:1200605:121068612106861211267582Alicycliphilus denitrificans BC chromosome, complete genomelexa repressor1e-1272
NC_011894:5056901:507563950756395076154516Methylobacterium nodulans ORS 2060, complete genomepeptidase S24 and S26 domain protein2e-1270.9
NC_009997:5188221:520999652099965210403408Shewanella baltica OS195, complete genomepeptidase S24 and S26 domain protein3e-1270.5
NC_009665:5072413:509286950928695093276408Shewanella baltica OS185 chromosome, complete genomeputative prophage repressor3e-1270.5
NC_016901:5130147:515061851506185151025408Shewanella baltica OS678 chromosome, complete genomepeptidase S24/S26A/S26B3e-1270.5
NC_020541:1786500:180581018058101806289480Rhodanobacter sp. 2APBS1, complete genomeSOS response UmuD protein9e-1268.9
NC_015224:4101939:411302441130244113632609Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,LexA repressor9e-1268.9
NC_007508:4476726:448566244856624486141480Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative polymerase V subunit2e-1168.2
NC_003902:3514000:352392035239203524399480Xanthomonas campestris pv. campestris str. ATCC 33913, completepolymerase V subunit2e-1168.2
NC_012034:6469:3152031520339792460Anaerocellum thermophilum DSM 6725, complete genomeLexA repressor6e-1166.2
NC_002939:47406:511435114351748606Geobacter sulfurreducens PCA, complete genomeLexA repressor6e-1166.2
NC_014720:4170:2587325873283322460Caldicellulosiruptor kronotskyensis 2002 chromosome, completelexa repressor7e-1165.9
NC_013730:2359939:239184123918412392086246Spirosoma linguale DSM 74, complete genomeSOS-response transcriptional repressors (RecA- mediated autopeptidase)-like protein8e-1165.9
NC_008702:2259430:226421722642172264825609Azoarcus sp. BH72, complete genomerepressor LexA1e-1065.1
NC_014733:1073540:108092910809291081171243Methylovorus sp. MP688 chromosome, complete genomepeptidase s24 and s26 domain protein3e-1063.9
NC_017986:5605197:563727956372795637887609Pseudomonas putida ND6 chromosome, complete genomeLexA repressor4e-1063.5
NC_017046:2026672:203809220380922038331240Salmonella enterica subsp. enterica serovar Typhimurium str. 798DNA repair protein4e-1063.5
NC_016832:948029:979172979172979411240Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Protein umuD'4e-1063.5
NC_007005:1605000:161250616125061612940435Pseudomonas syringae pv. syringae B728a, complete genomePeptidase S24, S26A and S26B6e-1063.2
NC_007005:830467:840487840487840921435Pseudomonas syringae pv. syringae B728a, complete genomePeptidase S24, S26A and S26B8e-1062.8
NC_007404:1570000:157077515707751571560786Thiobacillus denitrificans ATCC 25259, complete genomepeptidase S24, LexA repressor9e-1062.4
NC_014815:4385759:440488444048844405636753Micromonospora sp. L5 chromosome, complete genometranscriptional repressor, lexa family1e-0962.4
NC_014365:2037506:204991520499152050538624Desulfarculus baarsii DSM 2075 chromosome, complete genometranscriptional repressor, LexA family2e-0960.8
NC_015381:2109500:213695321369532137597645Burkholderia gladioli BSR3 chromosome 1, complete sequenceLexA repressor8e-0959.3
NC_013939:441921:457651457651458241591Deferribacter desulfuricans SSM1, complete genomeSOS-response transcriptional repressor9e-0958.9
NC_014830:1602198:160219816021981602941744Intrasporangium calvum DSM 43043 chromosome, complete genomeSOS-response transcriptional repressor, LexA9e-0958.9
NC_011146:1998981:202611320261132026718606Geobacter bemidjiensis Bem, complete genometranscriptional repressor, LexA family1e-0858.5
NC_007275:1:175717572182426Pseudomonas syringae pv. phaseolicola 1448A small plasmid, completeultraviolet light resistance protein A2e-0858.2
NC_012918:2896671:291377829137782914383606Geobacter sp. M21 chromosome, complete genomeSOS-response transcriptional repressor, LexA4e-0857
NC_010519:796229:820381820381821013633Haemophilus somnus 2336 chromosome, complete genomeLexA repressor5e-0856.6
NC_015740:2998500:300064130006413000970330Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeultraviolet light resistance protein A1e-0755.5
NC_015683:1467000:148330814833081484015708Corynebacterium ulcerans BR-AD22 chromosome, complete genomeSOS response regulatory protein3e-0753.9
NC_017317:1463466:147958914795891480296708Corynebacterium ulcerans 809 chromosome, complete genomeSOS response regulatory protein4e-0753.9
NC_008609:1976403:204977120497712050373603Pelobacter propionicus DSM 2379, complete genomeSOS-response transcriptional repressor, LexA5e-0753.5
NC_009997:2352948:237442223744222374697276Shewanella baltica OS195, complete genomehypothetical protein4e-0753.5
NC_021182:554000:556374556374557291918Clostridium pasteurianum BC1, complete genomeSOS response transcriptional repressor, RecA-mediated autopeptidase8e-0752.8
NC_014329:1328949:134501513450151345722708Corynebacterium pseudotuberculosis FRC41 chromosome, completeSOS response regulatory protein9e-0752.4
NC_016781:1327516:134483513448351345542708Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeLexA repressor9e-0752.4
NC_016932:1309644:132970813297081330415708Corynebacterium pseudotuberculosis 316 chromosome, complete genomeLexA repressor9e-0752.4
NC_017031:1328500:134482113448211345528708Corynebacterium pseudotuberculosis P54B96 chromosome, completeLexA repressor9e-0752.4
NC_017300:1326331:134239713423971343104708Corynebacterium pseudotuberculosis 1002 chromosome, completeLexA repressor9e-0752.4
NC_017301:1328500:134470313447031345410708Corynebacterium pseudotuberculosis C231 chromosome, completeLexA repressor9e-0752.4
NC_017303:1328777:134484413448441345551708Corynebacterium pseudotuberculosis I19 chromosome, complete genomeLexA repressor9e-0752.4
NC_017305:1326351:134241413424141343121708Corynebacterium pseudotuberculosis PAT10 chromosome, completeLexA repressor9e-0752.4
NC_007973:2150962:215525821552582155914657Ralstonia metallidurans CH34 chromosome 1, complete sequenceSOS-response transcriptional repressor, LexA1e-0652
NC_013715:1606396:161958916195891620326738Rothia mucilaginosa DY-18, complete genomeSOS-response transcriptional repressor1e-0652
NC_012856:2633890:264250326425032643081579Ralstonia pickettii 12D chromosome 1, complete genomepeptidase S24 and S26 domain protein1e-0651.6
NC_009436:2776410:281841528184152818849435Enterobacter sp. 638, complete genomephage repressor3e-0650.8
NC_010278:1235934:125094312509431251575633Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,LexA repressor3e-0650.8
NC_011830:2901346:291643429164342917048615Desulfitobacterium hafniense DCB-2, complete genomeSOS-response transcriptional repressor, LexA5e-0650.1
NC_014532:2298628:231880823188082319473666Halomonas elongata DSM 2581, complete genomeLexA repressor6e-0649.7
NC_006677:2575345:258116325811632581543381Gluconobacter oxydans 621H, complete genomeSOS (error prone) mutagenesis protein UmuD8e-0649.3