Pre_GI: BLASTP Hits

Some Help

Query: NC_006155:3805640:3810323 Yersinia pseudotuberculosis IP 32953, complete genome

Start: 3810323, End: 3810631, Length: 309

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a fully virulent serotype I strain isolated from a human patient. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003143:1059580:106425410642541064562309Yersinia pestis CO92, complete genomeintegrase (partial)4e-54209
NC_008149:3556999:356015835601583560406249Yersinia pestis Nepal516, complete genomeintegrase5e-42169
NC_013421:701005:744192744192745166975Pectobacterium wasabiae WPP163, complete genomeintegrase family protein2e-41167
NC_012214:537000:557388557388558347960Erwinia pyrifoliae Ep1/96, complete genomeintegrase5e-33139
NC_004631:4494000:4511590451159045126031014Salmonella enterica subsp. enterica serovar Typhi Ty2, completeprobable phage integrase8e-27119
NC_003198:4513900:4528781452878145297941014Salmonella enterica subsp. enterica serovar Typhi str. CT18,probable phage integrase8e-27119
NC_016832:4482437:4499858449985845008711014Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Phage integrase8e-27119
NC_016845:4498097:450306445030644503864801Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,Phage integrase5e-26116
NC_010634:3720214:372337337233733723522150Yersinia pseudotuberculosis PB1/+, complete genomeintegrase3e-21100
NC_014029:331919:4017584017584027711014Yersinia pestis Z176003 chromosome, complete genomeintegrase1e-2098.6
NC_009832:4564752:4572097457209745731101014Serratia proteamaculans 568, complete genomeintegrase family protein1e-2098.6
NC_009832:426993:4500724500724510851014Serratia proteamaculans 568, complete genomeintegrase family protein1e-2098.2
NC_013892:1503162:1513287151328715142941008Xenorhabdus bovienii SS-2004 chromosome, complete genometyrosine recombinase-like2e-1994
NC_014228:3505320:3510397351039735114131017Xenorhabdus nematophila ATCC 19061, complete genomeputative phage integrase4e-1993.2
NC_014228:3391500:3392691339269133936981008Xenorhabdus nematophila ATCC 19061, complete genomeputative phage integrase4e-1993.2
NC_014228:3391500:340640634064063406693288Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein4e-1890.1
NC_009832:4482500:4486861448686144878921032Serratia proteamaculans 568, complete genomeintegrase family protein7e-1889.4
NC_005773:4282840:4312613431261343141211509Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein7e-1889
NC_004578:895019:8995348995349009911458Pseudomonas syringae pv. tomato str. DC3000, complete genome9e-1889
NC_010554:2789722:2793999279399927950691071Proteus mirabilis HI4320, complete genomephage integrase2e-1787.8
NC_011149:4677412:467964346796434680569927Salmonella enterica subsp. enterica serovar Agona str. SL483,phage integrase3e-1787
NC_014532:3596097:3632063363206336330971035Halomonas elongata DSM 2581, complete genomesite-specific recombinase, phage integrase family3e-1787
NC_005773:866157:8716228716228728391218Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein3e-1787
NC_010067:3056774:307494730749473075873927Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-1786.7
NC_011745:3405520:342713034271303427705576Escherichia coli ED1a chromosome, complete genomehypothetical protein1e-1685.1
NC_009792:3245368:326593832659383266234297Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-1684.7
NC_004547:667988:6873806873806884021023Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative phage integrase1e-1582
NC_007005:1605000:1607964160796416093701407Pseudomonas syringae pv. syringae B728a, complete genomePhage integrase1e-1582
NC_004129:5481629:5491834549183454931711338Pseudomonas fluorescens Pf-5, complete genomesite-specific recombinase, phage integrase family1e-1582
NC_009656:4527457:4657608465760846589571350Pseudomonas aeruginosa PA7 chromosome, complete genomephage integrase family site specific recombinase9e-1682
NC_009656:4527457:4572105457210545733881284Pseudomonas aeruginosa PA7 chromosome, complete genomephage integrase family site specific recombinase1e-1581.6
NC_007005:830467:8359468359468371091164Pseudomonas syringae pv. syringae B728a, complete genome1e-1581.6
NC_008463:4566976:4589452458945245907321281Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative integrase2e-1581.3
NC_012560:3698697:3720276372027637215231248Azotobacter vinelandii DJ, complete genomephage integrase2e-1477.8
NC_021150:3698696:3720275372027537215221248Azotobacter vinelandii CA6, complete genomephage integrase2e-1477.8
NC_012962:3864000:386616338661633866405243Photorhabdus asymbiotica, complete genomeputative integrase-like protein8e-1475.9
NC_012660:4734363:474106147410614741222162Pseudomonas fluorescens SBW25 chromosome, complete genome4e-1373.2
NC_010939:1986263:200437920043792004945567Actinobacillus pleuropneumoniae serovar 7 str. AP76, completePutative integrase7e-1269.3
NC_012913:1041969:106300810630081063919912Aggregatibacter aphrophilus NJ8700, complete genomeintegrase4e-1166.6
NC_018691:2214464:221498022149802215912933Alcanivorax dieselolei B5 chromosome, complete genomeTyrosine recombinase xerC-like protein1e-0755.1
NC_015636:379000:394321394321395196876Methanothermococcus okinawensis IH1 chromosome, complete genomeintegrase family protein2e-0651.2
NC_012881:1802000:183366218336621834585924Desulfovibrio salexigens DSM 2638, complete genomeintegrase family protein5e-0649.7
NC_010554:2872000:288655128865512886685135Proteus mirabilis HI4320, complete genome6e-0649.7
NC_015730:3693391:371579737157973716258462Roseobacter litoralis Och 149 chromosome, complete genome8e-0649.3