Pre_GI: BLASTP Hits

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Query: NC_006155:2116834:2122962 Yersinia pseudotuberculosis IP 32953, complete genome

Start: 2122962, End: 2123573, Length: 612

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a fully virulent serotype I strain isolated from a human patient. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016845:4046142:405102140510214051617597Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,CI repressor8e-27120
NC_012917:3565268:357597535759753576832858Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeCI repressor1e-26119
NC_020181:5182568:519547351954735196063591Enterobacter aerogenes EA1509E, complete genomeCI9e-26116
NC_007613:761234:763483763483764052570Shigella boydii Sb227, complete genomerepressor protein1e-25116
NC_012947:2898179:290790729079072908476570Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeCI repressor1e-25116
NC_011742:2823000:282933728293372829969633Escherichia coli S88 chromosome, complete genomephage regulatory protein cI2e-25115
NC_014837:2458780:246975224697522470630879Pantoea sp. At-9b chromosome, complete genomeCI repressor2e-25115
NC_013592:804288:821538821538822101564Dickeya dadantii Ech586, complete genomeCI repressor4e-25114
NC_011601:846358:856102856102856671570Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomerepressor protein3e-25114
NC_013282:3389619:340505834050583405672615Cronobacter turicensis, complete genomePutative uncharacterized protein ORFI in retron EC672e-24112
NC_009436:1466580:147758714775871478183597Enterobacter sp. 638, complete genomebacteriophage CI repressor1e-23109
NC_014500:894136:9188619188619200541194Dickeya dadantii 3937 chromosome, complete genomeRepressor protein CI3e-23108
NC_006511:2677964:269383226938322694464633Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCphage repressor protein cI4e-23107
NC_003197:2870268:287617928761792876811633Salmonella typhimurium LT2, complete genomehypothetical protein4e-23107
NC_003198:4453457:450560945056094506241633Salmonella enterica subsp. enterica serovar Typhi str. CT18,phage repressor protein cI4e-23107
NC_011147:2676972:268936826893682690000633Salmonella enterica subsp. enterica serovar Paratyphi A strphage repressor protein cI4e-23107
NC_016860:2896254:289974528997452900377633Salmonella enterica subsp. enterica serovar Typhimurium strphage repressor protein cI4e-23107
NC_014306:1244721:124907312490731249669597Erwinia billingiae Eb661, complete genomeBacteriophage CI repressor2e-22105
NC_020260:312805:318993318993319607615Cronobacter sakazakii Sp291, complete genomehypothetical protein2e-22105
NC_016857:2871689:288686328868632887495633Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74phage repressor protein cI4e-22104
NC_011601:846358:855128855128856051924Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein8e-22103
NC_014837:3766426:378197237819723782577606Pantoea sp. At-9b chromosome, complete genomeCI repressor2e-21102
NC_016810:2871689:288692028869202887495576Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage repressor protein cI2e-1995.5
NC_015061:2770856:277962827796282780188561Rahnella sp. Y9602 chromosome, complete genomeCI repressor3e-1995.1
NC_020211:4598217:461422846142284614686459Serratia marcescens WW4, complete genomephage transcriptional regulator3e-1685.1
NC_015061:596247:611561611561612151591Rahnella sp. Y9602 chromosome, complete genomeCI repressor1e-1376.6
NC_009784:253852:266342266342266968627Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein4e-1374.3
NC_009436:3807420:381287738128773813464588Enterobacter sp. 638, complete genomebacteriophage CI repressor2e-1272
NC_010694:614985:629291629291629869579Erwinia tasmaniensis, complete genomeBacteriophage 186 repressor protein CI2e-1169.3
NC_009648:3803622:383337538333753833950576Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage repressor protein CI6e-1167.4
NC_011205:2938356:295459429545942954998405Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853phage repressor protein cI8e-0753.5
NC_012125:894955:920537920537920893357Salmonella enterica subsp. enterica serovar Paratyphi C strainrepressor protein4e-0651.2