Pre_GI: BLASTP Hits

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Query: NC_005126:1265071:1311883 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 1311883, End: 1312503, Length: 621

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014306:2476316:24763162476316248644610131Erwinia billingiae Eb661, complete genomeContact-dependent inhibition of growth factor CdiA4e-69260
NC_012962:484899:4936124936125024738862Photorhabdus asymbiotica, complete genomesimilar to hemagglutinin/hemolysin-related proteins. putativ transmembrane protein3e-56218
NC_012962:1661683:168115416811541681780627Photorhabdus asymbiotica, complete genomehypothetical protein1e-45182
NC_012962:3499900:353778835377883538474687Photorhabdus asymbiotica, complete genomehypothetical protein8e-34143
NC_008463:2848568:286830028683002868887588Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein5e-23107
NC_013421:2720500:27310352731035274898017946Pectobacterium wasabiae WPP163, complete genomefilamentous hemagglutinin family outer membrane protein1e-1996.3
NC_006155:2979500:298214829821482982399252Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein2e-1478.6
NC_010634:2894631:290007829000782900329252Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein2e-1478.6
NC_004088:1851500:188273418827341882985252Yersinia pestis KIM, complete genomehypothetical protein2e-1375.9
NC_008149:2337336:235096923509692351220252Yersinia pestis Nepal516, complete genomehypothetical protein2e-1375.9
NC_008150:2207198:222083122208312221082252Yersinia pestis Antiqua, complete genomehypothetical protein2e-1375.9
NC_003143:2778494:278911627891162789367252Yersinia pestis CO92, complete genomehypothetical protein2e-1375.9
NC_010159:1794000:180315718031571803408252Yersinia pestis Angola, complete genome2e-1375.9
NC_009381:2138625:214132221413222141573252Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-1375.9
NC_017168:2941938:297306929730692973320252Yersinia pestis A1122 chromosome, complete genomehypothetical protein2e-1375.9
NC_017265:1571305:160381516038151604066252Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein2e-1375.9
NC_014618:4312295:432375243237524324021270Enterobacter cloacae SCF1 chromosome, complete genome4e-1064.7
NC_005126:4210500:4215688421568842184742787Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein3e-0755.1
NC_013422:991500:1007521100752110119244404Halothiobacillus neapolitanus c2, complete genomeYD repeat protein3e-0755.1
NC_016641:3272500:328619932861993286540342Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein5e-0754.3
NC_010465:1790739:1804172180417218052271056Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein2e-0652
NC_010162:10894592:1090296210902962109058532892Sorangium cellulosum 'So ce 56', complete genomeRhs family carbohydrate-binding protein6e-0650.8