Pre_GI: BLASTP Hits

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Query: NC_004668:295417:299279 Enterococcus faecalis V583, complete genome

Start: 299279, End: 301240, Length: 1962

Host Lineage: Enterococcus faecalis; Enterococcus; Enterococcaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain is one of the first vancomycin-resistant strains isolated. This isolate came from a blood culture derived from a chronically-infected patient in 1987 from Barnes Hospital in St. Louis, Missouri, USA. This strain was found to lack the cytolysin gene and a surface adhesin, Esp, that contributes to urinary tract infections. Mobile genetic elements make up one quarter of the genome. This genera consists of organisms typically found in the intestines of mammals, although through fecal contamination they can appear in sewage, soil, and water. They cause a number of infections that are becoming increasingly a problem due to the number of antibiotic resistance mechanisms these organisms have picked up. Both Enterococcus faecalis and Enterococcus faecium cause similar diseases in humans, and are mainly distinguished by their metabolic capabilities. This opportunistic pathogen can cause urinary tract infections, bacteremia (bacteria in the blood), and infective endocarditis (inflammation of the membrane surrounding the heart), similar to infections caused by Enterococcus faecium. Hospital-acquired infections from this organism are on the rise due to the emergence of antiobiotic resistance strains. Enterococcus faecalis produces a cytolysin toxin that is encoded on various mobile genetic elements, pathogenicity islands, and conjugative plasmids. The cytolysin aids in pathogenesis, possibly by causing destruction of cells such as erythrocytes, which allows access to new nutrients for the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004606:446427:4537184537184556401923Streptococcus pyogenes SSI-1, complete genomeputative DNA polymerase0781
NC_006086:35599:4289042890448121923Streptococcus pyogenes MGAS10394, complete genomephage-related DNA polymerase0781
NC_004070:1431146:1441245144124514431671923Streptococcus pyogenes MGAS315, complete genomeputative DNA polymerase A domain - phage associated0781
NC_015558:905227:9170439170439189651923Streptococcus parauberis KCTC 11537 chromosome, complete genomepolymerase0780
NC_011375:749693:7571487571487590701923Streptococcus pyogenes NZ131 chromosome, complete genomeDNA polymerase0780
NC_009332:1050353:1060472106047210623941923Streptococcus pyogenes str. Manfredo chromosome, complete genomephage DNA polymerase0780
NC_012471:2080902:2096156209615620980781923Streptococcus equi subsp. equi 4047, complete genomephage DNA polymerase0779
NC_008021:1401249:1410861141086114127831923Streptococcus pyogenes MGAS9429, complete genomephage-related DNA polymerase0778
NC_008023:1426687:1434751143475114366731923Streptococcus pyogenes MGAS2096, complete genomephage-related DNA polymerase0776
NC_007297:1406796:1416408141640814183301923Streptococcus pyogenes MGAS5005, complete genomephage-encoded DNA polymerase0776
NC_009253:1265474:1265474126547412674261953Desulfotomaculum reducens MI-1 chromosome, complete genomeDNA-directed DNA polymerase0672
NC_017190:3166000:3172057317205731740031947Bacillus amyloliquefaciens LL3 chromosome, complete genomeDNA-dependent DNA polymerase, family A0655
NC_010320:1268355:1275073127507312770071935Thermoanaerobacter sp. X514 chromosome, complete genomeDNA-directed DNA polymerase0645
NC_015519:2526047:2533574253357425355321959Tepidanaerobacter sp. Re1 chromosome, complete genomeDNA-directed DNA polymerase0641
NC_015520:2974048:3000390300039030023631974Mahella australiensis 50-1 BON chromosome, complete genomeDNA-directed DNA polymerase0635
NC_002936:67896:7099570995729351941Dehalococcoides ethenogenes 195, complete genomeDNA-dependent DNA polymerase, family A0634
NC_016633:3069518:3112861311286131148011941Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeDNA polymerase I family protein5e-180631
NC_017179:1683199:1694059169405916960171959Clostridium difficile BI1, complete genomedna-directed dna polymerase i2e-179629
NC_008530:1454118:1462573146257314645071935Lactobacillus gasseri ATCC 33323, complete genomeDNA polymerase I - 3'-5' exonuclease and polymerase domain1e-178626
NC_014219:830966:8505648505648524981935Bacillus selenitireducens MLS10 chromosome, complete genomeDNA-directed DNA polymerase6e-178624
NC_013315:1679000:1686044168604416880021959Clostridium difficile CD196 chromosome, complete genomedna-directed dna polymerase i2e-177623
NC_014393:937000:9426419426419445781938Clostridium cellulovorans 743B chromosome, complete genomeDNA-directed DNA polymerase2e-176619
NC_014328:303063:3534693534693554181950Clostridium ljungdahlii ATCC 49587 chromosome, complete genomephage related DNA polymerase2e-175616
NC_010337:2848360:2884739288473928866791941Heliobacterium modesticaldum Ice1, complete genomeDNA polymerase i, putative4e-175615
NC_015697:506494:5136925136925156261935Lactobacillus reuteri SD2112 chromosome, complete genomeprophage LambdaSa04 DNA-directed DNA polymerase3e-174612
NC_015697:468234:4727004727004746341935Lactobacillus reuteri SD2112 chromosome, complete genomeprophage LambdaSa04 DNA-directed DNA polymerase5e-174611
NC_011898:3367457:3408136340813634100791944Clostridium cellulolyticum H10, complete genomeDNA-directed DNA polymerase7e-174610
NC_017338:1517723:1548740154874015506921953Staphylococcus aureus subsp. aureus JKD6159 chromosome, completebacterophage DNA-directed DNA polymerase8e-174610
NC_010079:1564327:1595345159534515972971953Staphylococcus aureus subsp. aureus USA300_TCH1516, completebacterophage DNA-directed DNA polymerase8e-174610
NC_007793:1574456:1581398158139815833501953Staphylococcus aureus subsp. aureus USA300, complete genomephage related DNA polymerase, family A8e-174610
NC_003909:386880:3955303955303974641935Bacillus cereus ATCC 10987, complete genomeDNA polymerase I2e-173609
NC_009706:2673906:2732602273260227345361935Clostridium kluyveri DSM 555 chromosome, complete genomePhage-related DNA polymerase3e-173609
NC_009699:2552195:2561611256161125635871977Clostridium botulinum F str. Langeland chromosome, complete genomeDNA-directed DNA polymerase I3e-173608
NC_012563:2680246:2687749268774926897161968Clostridium botulinum A2 str. Kyoto, complete genomeDNA polymerase1e-172607
NC_014219:3254268:3256965325696532589321968Bacillus selenitireducens MLS10 chromosome, complete genomeDNA-directed DNA polymerase5e-172605
NC_014393:4775452:4822059482205948240501992Clostridium cellulovorans 743B chromosome, complete genomeDNA-directed DNA polymerase7e-168591
NC_013740:1218429:1256938125693812589261989Acidaminococcus fermentans DSM 20731, complete genomeDNA-directed DNA polymerase8e-168590
NC_017294:115500:1222441222441241631920Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomeDNA-directed DNA polymerase1e-167590
NC_016791:4038069:4039967403996740419551989Clostridium sp. BNL1100 chromosome, complete genomeDNA polymerase I family protein2e-166586
NC_021182:554000:5622345622345642071974Clostridium pasteurianum BC1, complete genomeDNA polymerase I family protein with 3'-5'-exonuclease and polymerase domains5e-166585
NC_015683:1296000:1311914131191413138991986Corynebacterium ulcerans BR-AD22 chromosome, complete genomeDNA polymerase bacteriophage-type5e-166585
NC_017317:1291294:1308287130828713102721986Corynebacterium ulcerans 809 chromosome, complete genomebacteriophage-type DNA polymerase2e-165583
NC_015913:117966:1229271229271248461920Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeDNA-directed DNA polymerase2e-165583
NC_016077:1388775:1389527138952713915241998Acidaminococcus intestini RyC-MR95 chromosome, complete genomeDNA polymerase I4e-165582
NC_009633:4097536:4104091410409141060401950Alkaliphilus metalliredigens QYMF chromosome, complete genomeDNA-directed DNA polymerase5e-165581
NC_011660:2541632:2573109257310925747461638Listeria monocytogenes HCC23 chromosome, complete genomeDNA polymerase2e-164579
NC_014246:1457992:1457992145799214599681977Mobiluncus curtisii ATCC 43063 chromosome, complete genomeDNA-directed DNA polymerase4e-157555
NC_007432:654904:6639736639736659281956Streptococcus agalactiae A909, complete genomeprophage LambdaSa04, DNA polymerase5e-156551
NC_016048:4047922:4068888406888840709062019Oscillibacter valericigenes Sjm18-20, complete genomeputative DNA polymerase1e-154547
NC_013740:1218429:1221209122120912241242916Acidaminococcus fermentans DSM 20731, complete genomeDNA-directed DNA polymerase2e-121437
NC_018704:1424728:1434071143407114354951425Amphibacillus xylanus NBRC 15112, complete genomeDNA polymerase I8e-117421
NC_016048:3947663:3949211394921139504791269Oscillibacter valericigenes Sjm18-20, complete genomeputative DNA polymerase1e-113410
NC_017297:2531750:2562631256263125637251095Clostridium botulinum F str. 230613 chromosome, complete genome4e-90333
NC_012985:1191125:1191125119112511931522028Candidatus Liberibacter asiaticus str. psy62, complete genomeputative DNA polymerase from bacteriophage origin7e-88325
NC_013941:3182576:3195115319511531971782064Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeDNA polymerase I - 3''''-5'''' exonuclease and polymerase domains1e-86320
NC_014774:1210004:1251903125190312539302028Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completeputative DNA polymerase from bacteriophage origin8e-82305
NC_012985:1191125:3745374557722028Candidatus Liberibacter asiaticus str. psy62, complete genomeputative DNA polymerase from bacteriophage origin5e-79296
NC_012985:1:3745374557722028Candidatus Liberibacter asiaticus str. psy62, complete genomeputative DNA polymerase from bacteriophage origin5e-79296
NC_014376:1842290:1854406185440618555441139Clostridium saccharolyticum WM1 chromosome, complete genome6e-69262
NC_016048:3947663:394848539484853949204720Oscillibacter valericigenes Sjm18-20, complete genomeputative DNA polymerase6e-49196
NC_020126:2405175:2408242240824224103742133Myxococcus stipitatus DSM 14675, complete genomephage-related DNA polymerase3e-1790.9
NC_018704:1424728:143555914355591435801243Amphibacillus xylanus NBRC 15112, complete genomeDNA polymerase I5e-1790.1
NC_011138:831585:8361308361308372151086Alteromonas macleodii 'Deep ecotype', complete genomephage-related DNA polymerase3e-1687.4
NC_015436:1322087:133637113363711336628258Spirochaeta coccoides DSM 17374 chromosome, complete genome2e-1068.6
NC_021064:816000:816318816318816509192Propionibacterium avidum 44067, complete genomebacteriophage-type DNA polymerase8e-0859.7
NC_015152:2549756:257452725745272574688162Spirochaeta sp. Buddy chromosome, complete genome3e-0654.3