Pre_GI: BLASTP Hits

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Query: NC_004578:4465247:4477264 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 4477264, End: 4477911, Length: 648

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004129:5481629:549435354943535495000648Pseudomonas fluorescens Pf-5, complete genomeradical activating enzyme2e-109394
NC_018080:4465618:447999844799984480645648Pseudomonas aeruginosa DK2 chromosome, complete genomeradical activating enzyme3e-103374
NC_011770:4763506:477878447787844779578795Pseudomonas aeruginosa LESB58, complete genomeputative radical activating enzyme3e-103374
NC_008463:4566976:459192845919284592722795Pseudomonas aeruginosa UCBPP-PA14, complete genomeprobable radical activating enzyme3e-103374
NC_002516:1031386:105881210588121059606795Pseudomonas aeruginosa PAO1, complete genomeprobable radical activating enzyme3e-103374
NC_014394:2765261:278156927815692782228660Gallionella capsiferriformans ES-2 chromosome, complete genomeRadical SAM domain-containing protein1e-78292
NC_003902:3544743:356133735613373562020684Xanthomonas campestris pv. campestris str. ATCC 33913, completeradical activating enzyme2e-78291
NC_002488:1775629:180189218018921802575684Xylella fastidiosa 9a5c, complete genomehypothetical protein6e-76283
NC_014733:2363838:239044223904422391080639Methylovorus sp. MP688 chromosome, complete genomeradical sam domain protein3e-67254
NC_009012:3653111:366313136631313663763633Clostridium thermocellum ATCC 27405, complete genomeRadical SAM2e-42172
NC_016627:3815690:383083038308303831459630Clostridium clariflavum DSM 19732 chromosome, complete genomeorganic radical activating enzyme4e-37154
NC_012438:159927:166282166282166935654Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeorganic radical activating enzyme2e-23108
NC_010730:578493:584397584397585059663Sulfurihydrogenibium sp. YO3AOP1, complete genomeRadical SAM domain protein2e-21102
NC_017276:1285824:130355913035591304185627Sulfolobus islandicus REY15A chromosome, complete genomeorganic radical activating enzyme, NrdG3e-2098.6
NC_012589:1482075:149980914998091500435627Sulfolobus islandicus L.S.2.15, complete genomeRadical SAM domain protein3e-2098.2
NC_012588:1394103:141183714118371412463627Sulfolobus islandicus M.14.25 chromosome, complete genomeradical SAM protein3e-2098.2
NC_012622:1371448:138918213891821389808627Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeradical SAM protein3e-2098.2
NC_012623:1167289:116828411682841168910627Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeradical SAM protein3e-2098.2
NC_012632:1518520:153625415362541536880627Sulfolobus islandicus M.16.27 chromosome, complete genomeradical SAM protein3e-2098.2
NC_012726:1382095:139982913998291400455627Sulfolobus islandicus M.16.4 chromosome, complete genomeradical SAM protein3e-2098.2
NC_013769:1478546:149628014962801496906627Sulfolobus islandicus L.D.8.5 chromosome, complete genomeradical SAM protein3e-2098.2
NC_017275:1436875:145461014546101455236627Sulfolobus islandicus HVE10/4 chromosome, complete genomeradical SAM protein3e-2098.2
NC_002754:537792:540769540769541404636Sulfolobus solfataricus P2, complete genomehypothetical protein1e-1996.3
NC_012440:1215838:124151512415151242159645Persephonella marina EX-H1, complete genomeradical SAM domain protein6e-1994.4
NC_017516:1755500:175582917558291756467639Neisseria meningitidis H44/76 chromosome, complete genomeradical SAM domain-containing protein6e-1890.9
NC_010644:691374:691374691374691961588Elusimicrobium minutum Pei191, complete genomeradical SAM domain-containing protein2e-1789.4
NC_009440:1908864:190943119094311910063633Metallosphaera sedula DSM 5348 chromosome, complete genomeradical SAM protein3e-1788.6
NC_017515:1744500:174478717447871745425639Neisseria meningitidis M04-240196 chromosome, complete genomeradical SAM domain-containing protein4e-1788.2
NC_003106:1484768:148574214857421486380639Sulfolobus tokodaii str. 7, complete genomehypothetical protein7e-1787.4
NC_016111:639819:673680673680674387708Streptomyces cattleya NRRL 8057, complete genomeradical SAM protein1e-1583.2
NC_009615:1469642:150960615096061510151546Parabacteroides distasonis ATCC 8503 chromosome, complete genomehypothetical protein2e-1582.4
NC_008027:2621443:264128526412852641974690Pseudomonas entomophila L48, complete genomehypothetical protein5e-1580.9
NC_006512:952894:965040965040965741702Idiomarina loihiensis L2TR, complete genomeOrganic radical activating enzyme3e-1478.6
NC_007181:1364522:136623613662361366871636Sulfolobus acidocaldarius DSM 639, complete genomehypothetical protein1e-1376.6
NC_015224:889536:896196896196896867672Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein5e-1374.7
NC_014008:2176633:218067321806732181353681Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeRadical SAM domain protein1e-1273.2
NC_009053:1257302:127003912700391270671633Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein1e-1273.2
NC_009256:3540531:354421035442103544842633Burkholderia vietnamiensis G4 chromosome 1, complete sequenceorganic radical activating enzyme-like protein2e-1272.4
NC_008699:1132790:115779211577921158532741Nocardioides sp. JS614, complete genomeRadical SAM domain protein5e-1271.2
NC_015518:1638262:163957216395721640189618Acidianus hospitalis W1 chromosome, complete genomeorganic radical activating enzyme, NrdG5e-1270.9
NC_015703:234960:250733250733251335603Runella slithyformis DSM 19594 chromosome, complete genomeRadical SAM domain-containing protein1e-1169.7
NC_008820:2595500:261795826179582618638681Prochlorococcus marinus str. MIT 9303, complete genomepossible organic radical activating enzyme2e-1168.9
NC_011126:555483:590869590869591507639Hydrogenobaculum sp. Y04AAS1, complete genomeRadical SAM domain protein2e-1168.9
NC_007984:221030:234917234917235588672Baumannia cicadellinicola str. Hc (Homalodisca coagulata), completehypothetical protein5e-1167.8
NC_015151:1872280:189484318948431895499657Vulcanisaeta moutnovskia 768-28 chromosome, complete genomeradical SAM protein1e-1067
NC_019973:5650646:566970256697025670436735Mesorhizobium australicum WSM2073, complete genome7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE2e-1065.9
NC_015675:6276357:629541362954136296147735Mesorhizobium opportunistum WSM2075 chromosome, complete genome7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE2e-1065.9
NC_014923:5721686:574074257407425741476735Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE2e-1065.9
NC_015496:2155816:217130321713032171944642Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeRadical SAM domain protein3e-1065.1
NC_018419:226000:244131244131244802672Secondary endosymbiont of Ctenarytaina eucalypti chromosome,organic radical activating enzyme4e-1064.7
NC_015320:273979:281574281574282272699Archaeoglobus veneficus SNP6 chromosome, complete genomeanaerobic ribonucleoside-triphosphate reductase activating protein5e-1064.7
NC_017187:1923733:194278119427811943545765Arcobacter butzleri ED-1, complete genomeradical SAM domain-containing protein6e-1064.3
NC_012559:1064821:109135310913531091982630Laribacter hongkongensis HLHK9, complete genomeOrganic radical activating enzyme2e-0962.4
NC_000909:1615927:162768016276801628411732Methanocaldococcus jannaschii DSM 2661, complete genomecoenzyme PQQ synthesis protein III3e-0962
NC_009091:1598044:160873816087381609409672Prochlorococcus marinus str. MIT 9301, complete genomepossible organic radical activating enzyme4e-0961.6
NC_013162:811763:811763811763812395633Capnocytophaga ochracea DSM 7271, complete genomeRadical SAM domain protein5e-0961.2
NC_019673:2155669:217328421732842173919636Saccharothrix espanaensis DSM 44229 complete genomeGntS family protein2e-0859.7
NC_014041:4093190:410060741006074101278672Zunongwangia profunda SM-A87 chromosome, complete genomeradical SAM superfamily protein2e-0859.7
NC_013729:863743:896491896491897126636Kribbella flavida DSM 17836, complete genomehypothetical protein2e-0858.9
NC_019907:773944:779028779028779660633Liberibacter crescens BT-1 chromosome, complete genomequeuosine biosynthesis radical SAM protein QueE2e-0858.9
NC_014541:3642241:367457736745773675251675Ferrimonas balearica DSM 9799 chromosome, complete genomehypothetical protein3e-0858.5
NC_015574:2221220:223267722326772233378702Methanobacterium sp. SWAN-1 chromosome, complete genomeRadical SAM domain-containing protein5e-0858.2
NC_020410:1301500:130532513053251306056732Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete7-carboxy-7-deazaguanine synthase4e-0858.2
NC_013093:2633000:267457826745782675423846Actinosynnema mirum DSM 43827, complete genomepyruvate formate-lyase activating enzyme5e-0857.8
NC_017195:1411936:141804614180461418777732Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeYkvL5e-0857.8
NC_017082:532000:558486558486559136651Bradyrhizobium sp. S23321, complete genomehypothetical protein1e-0757
NC_015636:379000:401314401314402054741Methanothermococcus okinawensis IH1 chromosome, complete genomeRadical SAM domain-containing protein1e-0756.6
NC_010001:3421710:344193634419363442688753Clostridium phytofermentans ISDg, complete genomepyruvate formate-lyase activating enzyme1e-0756.6
NC_008278:2972323:298642829864282987093666Frankia alni ACN14a, complete genomeMycobacteriophage protein Gp53e-0755.5
NC_015555:49842:739707397074698729Thermoanaerobacterium xylanolyticum LX-11 chromosome, completepyruvate formate-lyase activating enzyme7e-0753.9
NC_015275:1223088:124302112430211243746726Clostridium lentocellum DSM 5427 chromosome, complete genomepyruvate formate-lyase activating enzyme1e-0653.1