Pre_GI: BLASTP Hits

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Query: NC_004547:913553:936079 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 936079, End: 937176, Length: 1098

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012917:833721:8544788544788555751098Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeiron-containing alcohol dehydrogenase0728
NC_011134:1854868:1871123187112318722141092Streptococcus equi subsp. zooepidemicus str. MGCS10565, completeglycerol dehydrogenase GldA4e-109394
NC_008023:1707021:1726442172644217275301089Streptococcus pyogenes MGAS2096, complete genomeGlycerol dehydrogenase2e-108392
NC_002737:1670164:1703651170365117047391089Streptococcus pyogenes M1 GAS, complete genomeglycerol dehydrogenase7e-108390
NC_013282:551219:5773695773695784721104Cronobacter turicensis, complete genomeGlycerol dehydrogenase5e-92338
NC_020260:3355814:3373504337350433746071104Cronobacter sakazakii Sp291, complete genomeglycerol dehydrogenase6e-92337
NC_014377:480158:5230445230445242071164Thermosediminibacter oceani DSM 16646 chromosome, complete genomeglycerol 2-dehydrogenase (NAD+)2e-91336
NC_015224:647341:6473416473416484351095Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,glycerol dehydrogenase9e-90330
NC_008800:614850:6148506148506159441095Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,glycerol dehydrogenase8e-90330
NC_008319:615135:6151356151356162711137Synechococcus sp. CC9311, complete genomeGlycerol dehydrogenase (GLDH)4e-81301
NC_012691:2050957:2064007206400720651131107Tolumonas auensis DSM 9187, complete genomeiron-containing alcohol dehydrogenase4e-80298
NC_016613:1960811:1979317197931719804111095Vibrio sp. EJY3 chromosome 1, complete sequenceglycerol dehydrogenase2e-78293
NC_009617:3184924:3203627320362732047181092Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeglycerol dehydrogenase3e-78292
NC_011027:1153592:1172366117236611734601095Chlorobaculum parvum NCIB 8327, complete genomeiron-containing alcohol dehydrogenase3e-77289
NC_009482:485238:4884474884474895831137Synechococcus sp. RCC307 chromosome, complete genomeglycerol dehydrogenase2e-75283
NC_009921:7249249:7264559726455972656561098Frankia sp. EAN1pec, complete genomeiron-containing alcohol dehydrogenase4e-72271
NC_015873:380485:3863823863823874671086Megasphaera elsdenii DSM 20460, complete genomeiron-containing alcohol dehydrogenase6e-67254
NC_003366:128783:1361901361901373201131Clostridium perfringens str. 13, complete genomeglycerol dehydrogenase6e-65248
NC_010501:1868888:1879062187906218801651104Pseudomonas putida W619, complete genomeiron-containing alcohol dehydrogenase2e-51202
NC_020291:1535402:1555674155567415567621089Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeglycerol dehydrogenase GldA3e-37155
NC_012751:1988280:200803720080372008468432Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeglycerol dehydrogenase, NAD4e-37155
CP002207:3850000:3869679386967938707341056Bacillus atrophaeus 1942, complete genomehypothetical protein1e-35150
NC_014639:3850000:3869679386967938707341056Bacillus atrophaeus 1942 chromosome, complete genomehypothetical protein1e-35150
NC_013714:796442:8106258106258117071083Bifidobacterium dentium Bd1, complete genomeGlycerol dehydrogenase3e-30132
NC_017214:1304774:1321013132101313222511239Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeglycerol dehydrogenase1e-27124
NC_017215:669358:6855986855986868361239Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,Oxidoreductase acting on the CH-OH group of donors1e-27124
NC_011835:1395716:1411956141195614131131158Bifidobacterium animalis subsp. lactis AD011 chromosome, completeoxidoreductase1e-27124
NC_012814:669434:6856746856746866871014Bifidobacterium animalis subsp. lactis Bl-04, complete genomeglycerol dehydrogenase8e-28124
NC_012815:669436:6856766856766866891014Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeglycerol dehydrogenase8e-28124
NC_017217:669437:6856776856776866901014Bifidobacterium animalis subsp. lactis V9 chromosome, completeglycerol dehydrogenase8e-28124
NC_017216:669296:6855366855366867261191Bifidobacterium animalis subsp. lactis BLC1, complete genomeglycerol dehydrogenase8e-28124
NC_007775:1002934:1005261100526110063821122Synechococcus sp. JA-3-3Ab, complete genomealcohol dehydrogenase, iron-containing2e-27123
NC_016835:405482:4054824054824065641083Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,glycerol dehydrogenase5e-23108
NC_015931:134601:1842711842711853381068Pyrolobus fumarii 1A, complete genome3-dehydroquinate synthase3e-1582.8
NC_014206:1618988:1643175164317516443621188Geobacillus sp. C56-T3 chromosome, complete genomeiron-containing alcohol dehydrogenase4e-1479.3
NC_014002:1408085:1410902141090214119631062Methanohalophilus mahii DSM 5219 chromosome, complete genome3-dehydroquinate synthase8e-1271.6
NC_007955:1108000:1114698111469811157711074Methanococcoides burtonii DSM 6242, complete genome3-dehydroquinate synthase2e-1170.1
NC_009440:2151638:2156564215656421576191056Metallosphaera sedula DSM 5348 chromosome, complete genomeNAD(P)-dependent glycerol-1-phosphate dehydrogenase1e-1067.4
NC_013522:1683326:1711918171191817130991182Thermanaerovibrio acidaminovorans DSM 6589, complete genomeiron-containing alcohol dehydrogenase4e-1065.9
NC_015954:2764919:2806118280611828071641047Halophilic archaeon DL31 chromosome, complete genome3-dehydroquinate synthase5e-1065.9
NC_015573:649800:6530066530066542081203Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomealcohol dehydrogenase8e-1065.1
NC_013926:511674:5209565209565220111056Aciduliprofundum boonei T469 chromosome, complete genome3-dehydroquinate synthase3e-0963.5
NC_008261:64678:9549595495966491155Clostridium perfringens ATCC 13124, complete genomealcohol dehydrogenase, iron-containing3e-0963.2
NC_015565:2027279:2060949206094920621511203Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completealcohol dehydrogenase6e-0962.4
NC_009073:529148:5374135374135384291017Pyrobaculum calidifontis JCM 11548, complete genome3-dehydroquinate synthase7e-0962
NC_014507:1797583:1811929181192918130111083Methanoplanus petrolearius DSM 11571 chromosome, complete genome3-dehydroquinate synthase1e-0861.2
NC_015275:654959:6730106730106741641155Clostridium lentocellum DSM 5427 chromosome, complete genomeAlcohol dehydrogenase2e-0860.5
NC_012796:129500:1307711307711321321362Desulfovibrio magneticus RS-1, complete genomedehydrogenase5e-0859.3
NC_016646:275818:2976892976892988461158Pseudovibrio sp. FO-BEG1 plasmid unnamed, complete sequenceiron-containing alcohol dehydrogenase5e-0858.9
NC_000961:1303446:1320074132007413211291056Pyrococcus horikoshii OT3, complete genomeglycerol-1-phosphate dehydrogenase5e-0858.9
NC_011770:3396637:3413232341323234143891158Pseudomonas aeruginosa LESB58, complete genome1,3-propanediol dehydrogenase1e-0758.2
NC_009922:2556033:2580950258095025821131164Alkaliphilus oremlandii OhILAs, complete genomeiron-containing alcohol dehydrogenase1e-0757.8
NC_014206:1745203:1773508177350817747251218Geobacillus sp. C56-T3 chromosome, complete genomeiron-containing alcohol dehydrogenase3e-0756.6
NC_018870:427357:4399654399654411131149Thermacetogenium phaeum DSM 12270 chromosome, complete genome1,3-propanediol dehydrogenase DhaT5e-0755.8
NC_013156:980888:100764710076471008639993Methanocaldococcus fervens AG86, complete genome3-dehydroquinate synthase8e-0755.1
NC_013887:1424000:1428909142890914299131005Methanocaldococcus sp. FS406-22 chromosome, complete genome3-dehydroquinate synthase1e-0654.7
NC_016943:1314500:1336306133630613375201215Blastococcus saxobsidens DD2, complete genomeputative alcohol dehydrogenase containing iron1e-0654.3
NC_011146:896000:9159819159819171681188Geobacter bemidjiensis Bem, complete genomeiron-containing alcohol dehydrogenase1e-0654.3
NC_012726:1292671:1294660129466012957151056Sulfolobus islandicus M.16.4 chromosome, complete genomeNAD(P)-dependent glycerol-1-phosphate dehydrogenase2e-0653.5
NC_005877:864118:8678418678418688931053Picrophilus torridus DSM 9790, complete genomeglycerol-1-phosphate dehydrogenase3e-0653.1
NC_014376:869749:8840488840488852381191Clostridium saccharolyticum WM1 chromosome, complete genomeiron-containing alcohol dehydrogenase4e-0652.8
NC_011740:2072173:2072173207217320732851113Escherichia fergusonii ATCC 35469, complete genomeputative Propanediol utilization propanol dehydrogenase pduQ4e-0652.8
NC_014632:567289:5711775711775723221146Ilyobacter polytropus DSM 2926 chromosome, complete genomeiron-containing alcohol dehydrogenase7e-0652
NC_015425:2072703:2089071208907120902251155Clostridium botulinum BKT015925 chromosome, complete genomeiron-containing alcohol dehydrogenase7e-0652
NC_015177:391774:4131744131744143251152Pedobacter saltans DSM 12145 chromosome, complete genomeiron-containing alcohol dehydrogenase8e-0651.6
NC_013194:2788299:2790215279021527913991185Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeiron-containing alcohol dehydrogenase9e-0651.6