Pre_GI: BLASTP Hits

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Query: NC_004547:3207776:3231768 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 3231768, End: 3231992, Length: 225

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012880:1711062:171855917185591718783225Dickeya dadantii Ech703, complete genomehypothetical protein8e-26115
NC_013592:1668092:167966416796641679888225Dickeya dadantii Ech586, complete genomeProtein of unknown function DUF25941e-25115
NC_012912:1701231:173587117358711736095225Dickeya zeae Ech1591, complete genomehypothetical protein2e-25114
NC_014500:3097362:312334531233453123569225Dickeya dadantii 3937 chromosome, complete genomeputative cytoplasmic protein2e-25114
NC_015224:2061951:207410720741072074331225Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein4e-24109
NC_008800:2013450:201767020176702017894225Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein4e-24109
NC_015566:1941407:194733219473321947556225Serratia sp. AS12 chromosome, complete genomehypothetical protein7e-24108
NC_020064:1854589:185888618588861859110225Serratia marcescens FGI94, complete genomeProtein of unknown function (DUF2594)1e-23108
NC_014837:1570500:157402215740221574246225Pantoea sp. At-9b chromosome, complete genomehypothetical protein1e-21102
NC_016816:2953530:298250329825032982727225Pantoea ananatis LMG 5342, complete genomehypothetical protein2e-21100
NC_012779:2184927:218797421879742188198225Edwardsiella ictaluri 93-146, complete genomehypothetical protein2e-21100
NC_013508:2130681:216049721604972160721225Edwardsiella tarda EIB202, complete genomehypothetical protein6e-2199.4
NC_009436:2685910:270072227007222700946225Enterobacter sp. 638, complete genomehypothetical protein4e-2096.7
NC_016514:2950860:295381129538112954035225Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YecF4e-2096.7
NC_006155:2084669:209253720925372092761225Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein8e-1785.5
NC_010159:2128157:213795521379552138179225Yersinia pestis Angola, complete genomehypothetical protein8e-1785.5
NC_003143:2101902:211091121109112111135225Yersinia pestis CO92, complete genomehypothetical protein8e-1785.5
NC_008150:1384102:139399013939901394214225Yersinia pestis Antiqua, complete genomehypothetical protein8e-1785.5
NC_010465:2582080:259126725912672591491225Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein8e-1785.5
NC_009381:1414985:142505014250501425274225Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein8e-1785.5
NC_009708:2537557:256130325613032561527225Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein8e-1785.5
NC_017168:3535786:354987835498783550102225Yersinia pestis A1122 chromosome, complete genomehypothetical protein8e-1785.5
NC_005810:1663672:167816616781661678390225Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein8e-1785.5