Pre_GI: BLASTP Hits

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Query: NC_004547:3207776:3207340 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 3207340, End: 3207783, Length: 444

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013421:1744928:174448917444891744935447Pectobacterium wasabiae WPP163, complete genomeDomain of unknown function DUF17957e-56215
NC_014500:894136:911708911708912115408Dickeya dadantii 3937 chromosome, complete genomehypothetical protein2e-53207
NC_012912:1701231:172043517204351720842408Dickeya zeae Ech1591, complete genomeDomain of unknown function DUF17953e-53206
NC_014500:3097362:313574031357403136147408Dickeya dadantii 3937 chromosome, complete genomehypothetical protein1e-52204
NC_012962:1068102:111002611100261110445420Photorhabdus asymbiotica, complete genomehypothetical protein8e-38155
NC_005126:349658:377114377114377533420Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein4e-37153
NC_014228:3442159:345159334515933452012420Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein1e-34145
NC_011001:2517159:252962125296212530043423Burkholderia cenocepacia J2315 chromosome 2, complete sequencehypothetical protein2e-1374.7
NC_010552:2089140:210195221019522102374423Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceDomain of unknown function DUF17951e-1272.4
NC_008543:2035292:204632220463222046744423Burkholderia cenocepacia HI2424 chromosome 2, complete sequencehypothetical protein9e-1372.4
NC_010515:2358134:236254423625442362966423Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceDomain of unknown function DUF17959e-1372.4
NC_008061:428501:432922432922433344423Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencehypothetical protein9e-1372.4
NC_014310:1413210:143561514356151436037423Ralstonia solanacearum PSI07 megaplasmid, complete sequencehypothetical protein8e-1372.4
NC_003296:1419992:143704214370421437473432Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completehypothetical protein3e-1167.4
NC_004088:266543:274302274302274724423Yersinia pestis KIM, complete genomehypothetical protein2e-0857.8
NC_008149:4053363:406112240611224061544423Yersinia pestis Nepal516, complete genomehypothetical protein2e-0857.8
NC_010634:4234932:424255442425544242976423Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein2e-0857.8
NC_005810:4469156:447710844771084477530423Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein2e-0857.8
NC_017168:1631052:165275016527501653172423Yersinia pestis A1122 chromosome, complete genomehypothetical protein2e-0857.8
NC_014228:3353896:336192533619253362380456Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein6e-0856.2
NC_013892:274297:293690293690294145456Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-0755.1
NC_012962:3463644:349409334940933494542450Photorhabdus asymbiotica, complete genomehypothetical protein4e-0753.9
NC_003295:3688000:369923736992373700055819Ralstonia solanacearum GMI1000, complete genomehypothetical protein2e-0651.6
NC_014307:1:285522855229361810Ralstonia solanacearum CFBP2957 chromosome, complete genomehypothetical protein3e-0650.8