Pre_GI: BLASTP Hits

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Query: NC_004547:2470978:2484489 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 2484489, End: 2484836, Length: 348

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016845:575123:587656587656588222567Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,phage polarity suppression protein4e-24110
NC_021066:5342127:536091353609135361479567Raoultella ornithinolytica B6, complete genomephage polarity suppression protein6e-24109
NC_010102:2862178:287323428732342873800567Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-23107
NC_004631:4661000:467163046716304672196567Salmonella enterica subsp. enterica serovar Typhi Ty2, completephage polarity suppression protein2e-22104
NC_003198:4676536:468874146887414689307567Salmonella enterica subsp. enterica serovar Typhi str. CT18,phage polarity suppression protein2e-22104
NC_011740:448000:454755454755455327573Escherichia fergusonii ATCC 35469, complete genomePolarity suppression protein (Amber mutation-suppressing protein)5e-22103
NC_016857:2871689:289444228944422895008567Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74phage polarity suppression protein9e-22102
NC_016810:2871689:289444228944422895008567Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage polarity suppression protein9e-22102
NC_010498:4072681:408569540856954086267573Escherichia coli SMS-3-5, complete genomephage polarity suppression protein2e-1994.7
NC_010468:1130000:115292811529281153500573Escherichia coli ATCC 8739, complete genomepolarity suppression protein2e-1994.4
NC_005126:5188976:520869952086995209061363Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein4e-1993.6
NC_010468:49074:514805148052043564Escherichia coli ATCC 8739, complete genomepolarity suppression protein3e-1993.6
NC_013361:4959323:496204249620424962614573Escherichia coli O26:H11 str. 11368 chromosome, complete genomepolarity suppression protein6e-1992.8
NC_007613:4217557:422380842238084224380573Shigella boydii Sb227, complete genomephage polarity suppression protein2e-1890.9
NC_011080:2870428:288260928826092883175567Salmonella enterica subsp. enterica serovar Newport str. SL254,phage polarity suppression protein7e-1889.4
NC_010102:2862178:286217828621782862744567Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-1787
NC_009436:3367194:337867733786773379243567Enterobacter sp. 638, complete genomephage polarity suppression5e-1786.3
NC_020063:1051310:106032410603241060620297Enterobacteriaceae bacterium strain FGI 57, complete genomePhage polarity suppression protein (Psu)4e-1683.6
NC_014121:677799:689251689251689814564Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completephage polarity suppression protein6e-1579.3
NC_013508:876431:888755888755889015261Edwardsiella tarda EIB202, complete genomehypothetical protein6e-1476.3
NC_013508:3593000:361120836112083611825618Edwardsiella tarda EIB202, complete genomehypothetical protein4e-1373.6
NC_013508:2870954:288777128877712888079309Edwardsiella tarda EIB202, complete genomehypothetical protein1e-1272