Pre_GI: BLASTP Hits

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Query: NC_004547:1174650:1204619 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1204619, End: 1205533, Length: 915

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012962:4591295:460186646018664602774909Photorhabdus asymbiotica, complete genomeiron(iii) dicitrate-binding periplasmic protein fecb4e-131467
NC_016612:3843358:386816338681633869065903Klebsiella oxytoca KCTC 1686 chromosome, complete genomeiron-dicitrate transporter substrate-binding subunit5e-124444
NC_012759:4433500:445016444501644451066903Escherichia coli BW2952 chromosome, complete genomeiron-dicitrate transporter substrate-binding subunit4e-122437
AC_000091:4501430:451808645180864518988903Escherichia coli W3110 DNA, complete genomeiron-dicitrate transporter subunit4e-122437
NC_000913:4494773:451142945114294512331903Escherichia coli K12, complete genomeKpLE2 phage-like element; iron-dicitrate transporter subunit4e-122437
NC_010473:4596500:461323746132374614139903Escherichia coli str. K-12 substr. DH10B, complete genomeKpLE2 phage-like element; iron-dicitrate transporter subunit; periplasmic-binding component of ABC superfamily4e-122437
NC_016822:4889656:488965648896564890558903Shigella sonnei 53G, complete genomeiron-dicitrate transporter substrate-binding subunit6e-122437
NC_014228:3591758:360334936033493604248900Xenorhabdus nematophila ATCC 19061, complete genomeIron(III) dicitrate-binding periplasmic protein precursor FecB5e-121434
NC_006510:2910000:292648229264822927423942Geobacillus kaustophilus HTA426, complete genomeferrichrome ABC transporter (substrate-binding protein)2e-23109
NC_014915:3039639:304614030461403047081942Geobacillus sp. Y412MC52 chromosome, complete genomeperiplasmic binding protein2e-23109
NC_016641:5671186:569648056964805697478999Paenibacillus terrae HPL-003 chromosome, complete genomeiron iii dicitrate transport protein2e-21103
NC_003450:3266604:3284397328439732854251029Corynebacterium glutamicum ATCC 13032, complete genomeABC-type transport systems, periplasmic component1e-1997.1
NC_006958:3240019:3257704325770432587321029Corynebacterium glutamicum ATCC 13032, complete genomeABC-type cobalamin/Fe3+-siderophores transport system, secreted component1e-1997.1
NC_005957:4311679:432630743263074327281975Bacillus thuringiensis serovar konkukian str. 97-27, completeiron compound ABC transporter, iron compound-binding protein8e-1891.3
NC_000911:15937:167401674017687948Synechocystis sp. PCC 6803, complete genomeiron(III) dicitrate transport system permease protein; FecB2e-1790.1
NC_017039:15937:167401674017687948Synechocystis sp. PCC 6803 substr. PCC-P, complete genomeiron(III) dicitrate transport system permeaseprotein2e-1790.1
NC_017052:15937:167401674017687948Synechocystis sp. PCC 6803 substr. PCC-N, complete genomeiron(III) dicitrate transport system permeaseprotein2e-1790.1
NC_017277:15937:167401674017687948Synechocystis sp. PCC 6803, complete genomeiron(III) dicitrate transport system permeaseprotein2e-1790.1
NC_019897:3669888:3669888366988836709221035Thermobacillus composti KWC4 chromosome, complete genomeFe3+-hydroxamate ABC transporter substrate-binding protein3e-1685.9
NC_014622:3955851:3978024397802439797451722Paenibacillus polymyxa SC2 chromosome, complete genomeABC fe(3+) transporter permease1e-1584
NC_016932:1041306:105460710546071055512906Corynebacterium pseudotuberculosis 316 chromosome, complete genomeIron ABC transporter substrate-binding protein2e-1376.6
NC_017031:1039548:106281410628141063719906Corynebacterium pseudotuberculosis P54B96 chromosome, completeIron ABC transporter substrate-binding protein2e-1376.6
NC_017301:1037519:106262710626271063532906Corynebacterium pseudotuberculosis C231 chromosome, completeIron ABC transporter substrate-binding protein2e-1376.6
NC_017303:1039562:106282810628281063733906Corynebacterium pseudotuberculosis I19 chromosome, complete genomeIron ABC transporter substrate-binding protein2e-1376.6
NC_017305:1037133:106039910603991061304906Corynebacterium pseudotuberculosis PAT10 chromosome, completeIron ABC transporter substrate-binding protein2e-1376.6
NC_014622:3955851:3980635398063539816751041Paenibacillus polymyxa SC2 chromosome, complete genomeiron(III) dicitrate ABC transporter permease3e-1376.3
NC_017300:1045555:106046410604641061369906Corynebacterium pseudotuberculosis 1002 chromosome, completeIron ABC transporter substrate-binding protein3e-1375.9
NC_014329:1041556:106299110629911063896906Corynebacterium pseudotuberculosis FRC41 chromosome, completeiron ABC transporter substrate-binding protein3e-1375.9
NC_010161:1914000:192907519290751930025951Bartonella tribocorum CIP 105476, complete genomeferric anguibactin-binding protein4e-1375.9
NC_016781:1039716:106304810630481063887840Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeiron ABC transporter substrate-binding protein4e-1375.5
NC_015683:1146913:115738311573831158288906Corynebacterium ulcerans BR-AD22 chromosome, complete genomeiron ABC transporter substrate-binding protein1e-1274.3
NC_017317:1143378:115453311545331155438906Corynebacterium ulcerans 809 chromosome, complete genomeiron ABC transport system substrate-binding protein9e-1374.3
NC_017200:4240500:424055542405554241499945Bacillus thuringiensis serovar finitimus YBT-020 chromosome,iron compound ABC transporter substrate-binding protein6e-1271.6
NC_012846:1837924:185235218523521853302951Bartonella grahamii as4aup, complete genomeferric anguibactin-binding protein9e-1271.2
NC_005955:1205836:122006012200601220959900Bartonella quintana str. Toulouse, complete genomeFerric anguibactin-binding protein2e-1169.7
NC_014563:19307:354133541336321909Pantoea vagans C9-1 plasmid pPag2, complete sequenceAchromobactin-binding periplasmic protein precursor3e-1169.3
NC_004193:375416:5751775751775762051029Oceanobacillus iheyensis HTE831, complete genomeferrichrome ABC transporter binding protein5e-1065.5
NC_015061:596247:600390600390601358969Rahnella sp. Y9602 chromosome, complete genomeperiplasmic binding protein6e-1065.1
NC_004193:375416:375416375416675301299886Oceanobacillus iheyensis HTE831, complete genome2e-0963.5
NC_013956:3273340:329930032993003300244945Pantoea ananatis LMG 20103 chromosome, complete genomeFatB2e-0963.2
NC_006371:1973500:198304319830431983993951Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical protein3e-0963.2
NC_016816:1137904:113790411379041138848945Pantoea ananatis LMG 5342, complete genomeiron siderophore (ferrichrome) ABC transporter substrate-binding protein3e-0962.8
NC_008010:105665:126435126435127304870Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceperiplasmic binding protein9e-0961.2
NC_003272:2560329:2576629257662925777141086Nostoc sp. PCC 7120, complete genomeferrichrome binding protein of ABC transporter2e-0860.1
NC_010465:62348:795577955780510954Yersinia pseudotuberculosis YPIII, complete genomeperiplasmic binding protein3e-0859.3
NC_017160:4508000:451075445107544511707954Yersinia pestis D182038 chromosome, complete genomeputative iron transport protein3e-0859.3
NC_012490:2660089:2664268266426826652751008Rhodococcus erythropolis PR4, complete genomeiron-siderophore binding protein5e-0858.5
NC_017316:2466244:248510924851092486062954Enterococcus faecalis OG1RF chromosome, complete genomeferric (Fe+3) ABC superfamily ATP binding cassette transporter, binding protein1e-0757.8
NC_007907:321537:3358173358173368271011Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0757
NC_014829:405104:4260594260594270601002Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeperiplasmic binding protein1e-0653.9
NC_006085:854500:876424876424877203780Propionibacterium acnes KPA171202, complete genomeperiplasmic binding protein2e-0653.9
NC_004668:2938000:295748529574852958438954Enterococcus faecalis V583, complete genomeiron compound ABC transporter, substrate-binding protein3e-0652.8
NC_010120:199942:221885221885222850966Neisseria meningitidis 053442, complete genomeiron(III) ABC transporter, periplasmic binding protein3e-0652.8
NC_011992:1038985:105606410560641056954891Acidovorax ebreus TPSY, complete genomeperiplasmic binding protein4e-0652.4
NC_017277:15937:2410124101251441044Synechocystis sp. PCC 6803, complete genomehypothetical protein4e-0652.4
NC_017052:15937:2410124101251441044Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein4e-0652.4
NC_017039:15937:2410124101251441044Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein4e-0652.4
NC_000911:15937:2410124101251441044Synechocystis sp. PCC 6803, complete genomehypothetical protein4e-0652.4
NC_014039:869826:8927558927558937681014Propionibacterium acnes SK137 chromosome, complete genomeperiplasmic binding protein6e-0651.6
NC_008782:1136732:115380511538051154695891Acidovorax sp. JS42, complete genomeperiplasmic binding protein1e-0551.2