Pre_GI: BLASTP Hits

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Query: NC_004547:1174650:1193409 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1193409, End: 1194704, Length: 1296

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009792:3665369:3682562368256236837731212Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein8e-89327
NC_009436:3117661:3138136313813631393441209Enterobacter sp. 638, complete genomerelaxase/mobilization nuclease family protein1e-86320
NC_011741:4570498:4587954458795445891621209Escherichia coli IAI1 chromosome, complete genomehypothetical protein5e-85315
CU928160:4570498:4587954458795445891621209Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein5e-85315
NC_016514:3573400:3592118359211835933591242Enterobacter cloacae EcWSU1 chromosome, complete genomerelaxase/Mobilization Nuclease family protein1e-84314
NC_010067:191190:2070122070122081691158Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-84313
NC_012880:3421500:3430823343082334319831161Dickeya dadantii Ech703, complete genomeRelaxase/mobilization nuclease family protein9e-84310
NC_009792:3245368:3278160327816032793921233Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-83310
NC_006905:4638707:465203846520384652868831Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein3e-83309
NC_012125:4716000:4728916472891647301751260Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein5e-83308
NC_013941:3300000:3326760332676033279921233Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein6e-83308
NC_011283:4438500:4456389445638944576661278Klebsiella pneumoniae 342 chromosome, complete genomerelaxase/mobilization nuclease domain protein8e-83307
NC_010694:1052722:107422510742251075052828Erwinia tasmaniensis, complete genomehypothetical protein2e-80299
NC_012917:1840172:1861399186139918627331335Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeRelaxase/mobilization nuclease family protein1e-79297
NC_008800:1090000:1106028110602811072991272Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,repetative plasmid-related protein5e-76285
NC_011094:2791719:2807975280797528092161242Salmonella enterica subsp. enterica serovar Schwarzengrund strrelaxase/mobilization nuclease domain-containing protein2e-75283
NC_009801:2898426:2924064292406429252781215Escherichia coli E24377A, complete genomerelaxase/mobilization nuclease domain protein2e-74280
NC_016816:1545354:1568538156853815696291092Pantoea ananatis LMG 5342, complete genomerelaxase/mobilization nuclease domain protein5e-74278
NC_014562:2563466:2582727258272725837641038Pantoea vagans C9-1 chromosome, complete genomehypothetical protein5e-58225
NC_013971:73037:885268852689119594Erwinia amylovora ATCC 49946 chromosome, complete genomemobilization protein1e-50201
NC_012559:854507:8833798833798847041326Laribacter hongkongensis HLHK9, complete genomeRelaxase/mobilization nuclease topoisomerase/primase fusion protein2e-38160
NC_011729:2732163:2751610275161027527881179Cyanothece sp. PCC 7424 chromosome, complete genomerelaxase7e-28125
NC_013222:229190:2398182398182408641047Robiginitalea biformata HTCC2501, complete genomehypothetical protein2e-27123
NC_007973:3065632:308756730875673088193627Ralstonia metallidurans CH34 chromosome 1, complete sequencehypothetical protein1e-21104
NC_010547:194500:2072282072282082921065Cyanothece sp. ATCC 51142 chromosome linear, complete sequencehypothetical protein3e-1583.6
NC_019744:20500:3706737067384521386Cylindrospermum stagnale PCC 7417 plasmid pCYLST.02, completerelaxase/mobilization nuclease1e-1274.7
NC_019968:1304450:132760613276061328532927Prevotella dentalis DSM 3688 chromosome 2, complete sequencerelaxase/mobilization nuclease4e-1066.6
NC_015571:2002489:202430020243002025226927Porphyromonas gingivalis TDC60, complete genomemobilization protein5e-1065.9
NC_015311:2626850:2663401266340126644801080Prevotella denticola F0289 chromosome, complete genomerelaxase/mobilization nuclease domain-containing protein1e-0964.7
NC_019960:1658657:1739684173968417407631080Prevotella dentalis DSM 3688 chromosome 1, complete sequencerelaxase/mobilization nuclease5e-0962.8
NC_015571:2044000:2069579206957920708591281Porphyromonas gingivalis TDC60, complete genomehypothetical protein4e-0859.7
NC_014033:1301154:131058413105841311468885Prevotella ruminicola 23 chromosome, complete genomemobilization protein5e-0859.3
NC_004663:6223442:6245427624542762466081182Bacteroides thetaiotaomicron VPI-5482, complete genomeputative mobilization protein4e-0756.2
NC_010729:1014957:102941310294131030354942Porphyromonas gingivalis ATCC 33277, complete genomeputative mobilization protein4e-0756.2
NC_016610:726128:742472742472743413942Tannerella forsythia ATCC 43037 chromosome, complete genomerelaxase/mobilization nuclease domain-containing protein9e-0755.5
NC_016609:7427500:7445765744576574467901026Niastella koreensis GR20-10 chromosome, complete genomeRelaxase/mobilization nuclease family protein8e-0755.5
NC_016776:246648:2486782486782499071230Bacteroides fragilis 638R, complete genomeputative mobilisation protein8e-0755.5
NC_003240:137907:1453411453411467561416Nostoc sp. PCC 7120 plasmid pCC7120beta, complete sequencehypothetical protein9e-0755.1
NC_007973:3065632:3082830308283030841551326Ralstonia metallidurans CH34 chromosome 1, complete sequencehypothetical protein1e-0654.7
NC_013037:6281164:630842163084216309266846Dyadobacter fermentans DSM 18053, complete genomeRelaxase/mobilization nuclease family protein2e-0653.9
NC_016776:1609476:1628006162800616292741269Bacteroides fragilis 638R, complete genomeputative mobilisation protein4e-0653.1
NC_006347:1585191:1605466160546616067341269Bacteroides fragilis YCH46, complete genomehypothetical protein3e-0653.1
NC_015164:2859000:288532128853212886241921Bacteroides salanitronis DSM 18170 chromosome, complete genomeRelaxase/mobilization nuclease family protein5e-0652.8
NC_015571:1030527:1052438105243810536671230Porphyromonas gingivalis TDC60, complete genomemobilization protein6e-0652.4
NC_003228:2010643:2048637204863720499321296Bacteroides fragilis NCTC 9343, complete genomehypothetical protein7e-0652.4
NC_015311:403281:430641430641431561921Prevotella denticola F0289 chromosome, complete genomerelaxase/mobilization nuclease domain-containing protein7e-0652.4