Pre_GI: BLASTP Hits

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Query: NC_004349:3938:17324 Shewanella oneidensis MR-1 plasmid pMR-1, complete sequence

Start: 17324, End: 18154, Length: 831

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009656:5505413:5505413550541355084423030Pseudomonas aeruginosa PA7 chromosome, complete genometransposase9e-129459
NC_012857:1097400:1113099111309911161283030Ralstonia pickettii 12D chromosome 2, complete genometransposase Tn3 family protein9e-129459
NC_003919:2824000:2829046282904628302961251Xanthomonas axonopodis pv. citri str. 306, complete genomeTn5044 transposase1e-128459
NC_009254:637952:6606706606706636963027Burkholderia vietnamiensis G4 chromosome 3, complete sequencetransposase Tn3 family protein3e-125447
NC_007337:10464:1229912299153253027Ralstonia eutropha JMP134 plasmid 1, complete sequenceTransposase Tn33e-125447
NC_015942:722980:7229807229807260093030Acidithiobacillus ferrivorans SS3 chromosome, complete genometransposase Tn3 family protein4e-108390
NC_020541:2264521:2277942227794222810253084Rhodanobacter sp. 2APBS1, complete genometransposase, TnpA family4e-63241
NC_008345:4107847:4129062412906241321483087Shewanella frigidimarina NCIMB 400, complete genometransposase Tn3 family protein1e-62240
NC_009438:212476:2128112128112158913081Shewanella putrefaciens CN-32 chromosome, complete genometransposase Tn3 family protein9e-63240
NC_020541:2191600:2202784220278422058673084Rhodanobacter sp. 2APBS1, complete genometransposase, TnpA family2e-62239
NC_008738:1:575730773021Marinobacter aquaeolei VT8 plasmid pMAQU01, complete sequencetransposase Tn3 family protein2e-49196
NC_008345:4107847:4121926412192641249042979Shewanella frigidimarina NCIMB 400, complete genometransposase Tn3 family protein3e-49195
NC_012668:3037345:3054481305448130566192139Vibrio cholerae MJ-1236 chromosome 1, complete sequencetransposase Tn3 family protein1e-48193
NC_016445:89500:9236692366951042739Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetransposase Tn3 family protein1e-48193
NC_018679:2412000:2431744243174424347222979Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completetransposase Tn3 family protein1e-47190
NC_018605:846500:863897863897864610714Cardinium endosymbiont cPer1 of Encarsia pergandiella, complete5e-42171
NC_009999:38832:493964939649752357Shewanella baltica OS195 plasmid pS19502, complete sequencetransposase9e-38157
NC_016445:89500:914199141992012594Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetransposase Tn37e-30130
NC_011138:3182807:320382332038233204293471Alteromonas macleodii 'Deep ecotype', complete genometransposase3e-29129
NC_009254:745706:7595277595277625082982Burkholderia vietnamiensis G4 chromosome 3, complete sequencetransposase Tn3 family protein6e-22104
NC_014228:4360676:437347143734714373647177Xenorhabdus nematophila ATCC 19061, complete genometransposase (fragment)1e-21103
NC_008060:1346581:1348000134800013509812982Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencetransposase Tn36e-2098.2
NC_008544:818730:8330088330088359892982Burkholderia cenocepacia HI2424 chromosome 3, complete sequencetransposase Tn3 family protein6e-2098.2
NC_008750:2332000:2333044233304423360192976Shewanella sp. W3-18-1, complete genometransposase Tn3 family protein5e-2098.2
NC_020541:1827689:1831288183128818342452958Rhodanobacter sp. 2APBS1, complete genometransposase, TnpA family1e-1997.1
NC_004349:3938:1294512945159112967Shewanella oneidensis MR-1 plasmid pMR-1, complete sequenceISSod9, transposase4e-1995.1
NC_017190:3879148:3886424388642438893902967Bacillus amyloliquefaciens LL3 chromosome, complete genometransposase for transposon Tn15462e-1789.7
NC_017190:2002718:2018236201823620212022967Bacillus amyloliquefaciens LL3 chromosome, complete genometransposase for transposon Tn15462e-1789.7
NC_014551:2057971:2073474207347420764402967Bacillus amyloliquefaciens DSM 7, complete genomeTransposase for transposon Tn15462e-1789.7
NC_014551:3864127:3871403387140338743692967Bacillus amyloliquefaciens DSM 7, complete genomeTransposase for transposon Tn15462e-1789.7
NC_007508:2756945:2771623277162327746132991Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeTn5044 transposase2e-1789.7
NC_011667:1:72467246102122967Thauera sp. MZ1T plasmid pTha01, complete sequencetransposase Tn3 family protein4e-1788.6
NC_017201:139000:1498811498811516021722Bacillus thuringiensis serovar finitimus YBT-020 plasmid pBMB26,transposase X6e-1788.2
NC_007507:101887:1051471051471081102964Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,Tn5044 transposase7e-1787.8
NC_014366:588347:6026026026026038581257Gamma proteobacterium HdN1, complete genome7e-1787.8
NC_011662:2402408:2421365242136524243312967Thauera sp. MZ1T, complete genometransposase Tn3 family protein2e-1686.7
NC_011586:268927:2947482947482965441797Acinetobacter baumannii AB0057 chromosome, complete genometransposase ISSod92e-1686.7
NC_018080:3055358:3066793306679330697592967Pseudomonas aeruginosa DK2 chromosome, complete genometransposase Tn3 family protein2e-1686.7
NC_013365:92973:1158311158311184702640Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete2e-1686.7
NC_008573:195317:2063362063362092302895Shewanella sp. ANA-3 plasmid 1, complete sequencetransposase Tn3 family protein2e-1686.3
NC_009349:78000:97855978551008212967Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completeTnpA transposase2e-1686.3
NC_016860:4055117:4068587406858740715532967Salmonella enterica subsp. enterica serovar Typhimurium strTn3 family transposase2e-1686.3
NC_017328:1075535:1113383111338311163492967Shigella flexneri 2002017 chromosome, complete genomeTnpA transposase2e-1686.3
NC_015733:5909821:5925534592553459285002967Pseudomonas putida S16 chromosome, complete genomeTn501 transposition transposase4e-1685.5
NC_009431:40917:6692666926686471722Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA03, completeTOBE domain-containing protein4e-1685.5
NC_010170:3908500:3932413393241339350312619Bordetella petrii, complete genomeISSod9, transposase5e-1685.1
NC_010002:2933909:2948215294821529511872973Delftia acidovorans SPH-1, complete genometransposase Tn3 family protein7e-1684.7
NC_007086:2477040:249963824996382500534897Xanthomonas campestris pv. campestris str. 8004, complete genomeTn5041 transposase6e-1684.7
NC_003902:2469500:247871124787112479607897Xanthomonas campestris pv. campestris str. ATCC 33913, completeTn5041 transposase6e-1684.7
NC_016147:623666:6337306337306367232994Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative transposon Tn5044/Tn3926 transposase6e-1684.7
NC_011092:9974:2704827048288681821Salmonella enterica subsp. enterica serovar Schwarzengrund strtransposase8e-1684.3
NC_018000:1207231:1207780120778012089971218Sinorhizobium fredii USDA 257 chromosome, complete genometransposase for transposon Tn39261e-1584
NC_009434:3611738:3707589370758937105822994Pseudomonas stutzeri A1501, complete genomeTn3 family transposase1e-1583.6
NC_009656:115390:1181791181791211722994Pseudomonas aeruginosa PA7 chromosome, complete genometransposase1e-1583.6
NC_018080:3088866:3092391309239130953572967Pseudomonas aeruginosa DK2 chromosome, complete genomeTn4656/Tn4657/Tn4658 transposase1e-1583.6
NC_010801:421906:4219064219064249533048Burkholderia multivorans ATCC 17616 chromosome 3, completeISBmu14 transposase1e-1583.6
NC_009656:5475540:5498875549887555018412967Pseudomonas aeruginosa PA7 chromosome, complete genometransposase1e-1583.6
NC_016846:24500:2621926219291852967Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS2,transposase for transposon Tn17211e-1583.6
NC_010545:1781393:1787877178787717892711395Corynebacterium urealyticum DSM 7109, complete genometransposase of Tn5393-like transposon, C-terminal fragment2e-1583.2
NC_007973:3240866:3255073325507332573402268Ralstonia metallidurans CH34 chromosome 1, complete sequencetransposase Tn32e-1582.8
NC_008609:1976403:2061652206165220646242973Pelobacter propionicus DSM 2379, complete genometransposase Tn3 family protein3e-1582.4
NC_004757:905417:9113769113769143452970Nitrosomonas europaea ATCC 19718, complete genomeTransposase Tn3 family3e-1582.4
NC_017202:1:1014101439772964Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT127,Transposase for transposon Tn15463e-1582.4
NC_017202:1:1620316203191662964Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT127,Transposase for transposon Tn15463e-1582.4
NC_007005:3199820:3236917323691732398022886Pseudomonas syringae pv. syringae B728a, complete genomeTransposase Tn33e-1582.4
NC_008740:1414926:1414926141492614178982973Marinobacter aquaeolei VT8, complete genometransposase Tn3 family protein4e-1582
NC_011973:70764:7076470764737122949Bacillus cereus Q1 plasmid pBc239, complete sequenceTnpA6e-1581.3
NC_011586:268927:2988362988363018413006Acinetobacter baumannii AB0057 chromosome, complete genometransposase Tn36e-1581.3
NC_010410:3606826:3633817363381736363662550Acinetobacter baumannii AYE, complete genomeTransposase of Tn19e-1580.9
NC_016809:112410:1199061199061230403135Haemophilus influenzae 10810, complete genometransposase1e-1480.5
NC_010410:3606826:3629949362994936327082760Acinetobacter baumannii AYE, complete genomeTransposase1e-1480.5
NC_017387:247462:2535162535162563862871Acinetobacter baumannii TCDC-AB0715 chromosome, complete genometransposase IS261e-1480.5
NC_011586:268927:3043543043543072902937Acinetobacter baumannii AB0057 chromosome, complete genometransposase IS261e-1480.5
NC_018605:846500:8672908672908691701881Cardinium endosymbiont cPer1 of Encarsia pergandiella, completeTransposase for transposon Tn25011e-1480.5
NC_016624:112919:1136371136371165942958Azospirillum lipoferum 4B plasmid AZO_p5, complete sequenceTransposase of ISAli20, Tn3 family2e-1479.7
NC_003384:109036:1229251229251258972973Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmidtransposase2e-1479.7
NC_009140:121107:1211071211071240792973Salmonella enterica enterica sv Newport str. SL254, completetransposase TnpA for transposon Tn212e-1479.7
NC_008344:1364142:1374505137450513774772973Nitrosomonas eutropha C91, complete genometransposase Tn3 family protein2e-1479.7
NC_008341:29038:3686836868398402973Nitrosomonas eutropha C91 plasmid1, complete sequencetransposase Tn3 family protein2e-1479.7
NC_009838:81913:9162391623945952973Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequencetransposase2e-1479.7
NC_015963:117178:149000149000149803804Enterobacter asburiae LF7a plasmid pENTAS01, complete sequence2e-1479.7
NC_014107:171170:188527188527189480954Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,putative transposase4e-1478.6
NC_006625:63342:7831778317812862970Klebsiella pneumoniae NTUH-K2044 plasmid pK2044, complete sequencetransposase Tn3 family protein6e-1478.2
NC_009052:2512373:2527424252742425300122589Shewanella baltica OS155, complete genometransposase Tn3 family protein8e-1477.8
NC_009649:16907:3216232162334271266Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,transposase9e-1477.4
NC_009052:2512373:2516578251657825195622985Shewanella baltica OS155, complete genometransposase Tn3 family protein1e-1377.4
NC_015740:1291739:131176413117641312429666Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completetransposase2e-1376.6
NC_018868:619113:6514956514956545903096Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genometransposase1e-1376.6
NC_007274:72979:741697416974843675Pseudomonas syringae pv. phaseolicola 1448A large plasmid, completetransposase, truncated2e-1376.3
NC_011777:100631:1202571202571232202964Bacillus cereus AH820 plasmid pAH820_272, complete sequencetransposase4e-1375.1
NC_009921:5681677:5700823570082357033392517Frankia sp. EAN1pec, complete genometransposase Tn3 family protein1e-1273.6
NC_011138:3182807:3188707318870731916792973Alteromonas macleodii 'Deep ecotype', complete genomeTn5044 transposase2e-1272.8
NC_008025:1799106:1809837180983718128573021Deinococcus geothermalis DSM 11300, complete genometransposase Tn35e-1272
NC_010473:1384000:1393946139394613969543009Escherichia coli str. K-12 substr. DH10B, complete genometransposase5e-1271.6
NC_020409:621792:6594306594306623542925Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completetransposase8e-1271.2
NC_014972:1923035:1930708193070819337103003Desulfobulbus propionicus DSM 2032 chromosome, complete genometransposase Tn3 family protein6e-1271.2
NC_014228:2270000:227060122706012271380780Xenorhabdus nematophila ATCC 19061, complete genometransposase (fragment)1e-1170.9
NC_010694:3178842:319765531976553198032378Erwinia tasmaniensis, complete genome8e-1167.8
NC_010693:1:195091950920042534Erwinia tasmaniensis plasmid pET46, complete sequence9e-1167.8
NC_009838:81913:1075071075071085801074Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequenceputative transposase1e-1067.4
NC_008025:1152594:116440111644011165399999Deinococcus geothermalis DSM 11300, complete genomeputative transposase2e-1066.2
NC_009254:637952:6829056829056859012997Burkholderia vietnamiensis G4 chromosome 3, complete sequencetransposase Tn3 family protein3e-1065.9
NC_011138:3182807:3201315320131532038102496Alteromonas macleodii 'Deep ecotype', complete genomeTransposase Tn36e-1065.1
NC_010688:2781624:278742527874252788063639Xanthomonas campestris pv. campestris, complete genomeputative transposase fragment6e-1065.1
NC_007434:2290934:2300842230084223040213180Burkholderia pseudomallei 1710b chromosome I, complete sequenceTransposase5e-1065.1
NC_008345:4107847:4126523412652341291742652Shewanella frigidimarina NCIMB 400, complete genometransposase Tn3 family protein7e-1064.7
NC_006363:36959:575715757158266696Nocardia farcinica IFM 10152 plasmid pNF2, complete sequenceputative transposase2e-0963.2
NC_007507:101887:1195181195181224932976Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,Tn5045 transposase3e-0962.8
NC_011662:2374955:2381818238181823848413024Thauera sp. MZ1T, complete genometransposase Tn3 family protein3e-0962.8
NC_008573:195317:1953171953171983042988Shewanella sp. ANA-3 plasmid 1, complete sequencetransposase Tn3 family protein3e-0962.4
NC_009973:301391:3226263226263238641239Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU01, completetransposase Tn3 family protein2e-0860.1
NC_018080:3088866:3103271310327131062853015Pseudomonas aeruginosa DK2 chromosome, complete genometransposase5e-0858.5
NC_009656:3127240:3172070317207031750843015Pseudomonas aeruginosa PA7 chromosome, complete genometransposase5e-0858.5
NC_008463:3168837:3177507317750731805213015Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative transposase5e-0858.5
NC_008782:1917634:1922640192264019256783039Acidovorax sp. JS42, complete genometransposase Tn3 family protein1e-0757.4
NC_011992:2279752:228916722891672289610444Acidovorax ebreus TPSY, complete genome2e-0757
NC_014841:248487:2641502641502672453096Pantoea sp. At-9b plasmid pPAT9B04, complete sequencetransposase Tn3 family protein1e-0757
NC_008752:2936933:2970119297011929730942976Acidovorax avenae subsp. citrulli AAC00-1, complete genometransposase Tn3 family protein1e-0757
NC_008752:3217695:3230650323065032336252976Acidovorax avenae subsp. citrulli AAC00-1, complete genometransposase Tn3 family protein1e-0757
NC_011662:2374955:2386933238693323898992967Thauera sp. MZ1T, complete genometransposase Tn3 family protein4e-0755.5
NC_018080:3088866:3108223310822331112403018Pseudomonas aeruginosa DK2 chromosome, complete genomeTn4652, transposase6e-0754.7
NC_016591:202342:2023422023422051012760Burkholderia sp. YI23 plasmid byi_2p, complete sequencetransposase7e-0754.7
NC_010693:1:1560415604183062703Erwinia tasmaniensis plasmid pET46, complete sequenceTransposase for transposon Tn25011e-0653.9
NC_008782:1917634:194162019416201942318699Acidovorax sp. JS42, complete genome4e-0652.4
NC_014170:57954:7095870958739362979Xenorhabdus nematophila ATCC 19061 plasmid XNC1_p, completetransposase4e-0652.4