Pre_GI: BLASTP Hits

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Query: NC_004347:4441110:4461229 Shewanella oneidensis MR-1, complete genome

Start: 4461229, End: 4462593, Length: 1365

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011725:1383798:1386313138631313876561344Bacillus cereus B4264 chromosome, complete genomeTrkH family potassium uptake protein8e-99361
NC_004722:1352000:1354522135452213558651344Bacillus cereus ATCC 14579, complete genomePotassium uptake protein KtrB8e-99361
NC_014171:1356000:1358119135811913594621344Bacillus thuringiensis BMB171 chromosome, complete genomepotassium uptake protein KtrB1e-98360
NC_011772:1329730:1329730132973013310731344Bacillus cereus G9842, complete genomepotassium uptake protein, TrkH family4e-98358
NC_006274:1367377:1369801136980113711441344Bacillus cereus E33L, complete genomepotassium/sodium uptake protein5e-98358
NC_010184:1373375:1373375137337513747181344Bacillus weihenstephanensis KBAB4, complete genomepotassium uptake protein, TrkH family9e-98357
NC_016779:1321723:1321723132172313230661344Bacillus cereus F837/76 chromosome, complete genomeTrkH family potassium uptake protein2e-97356
NC_011658:1437813:1440043144004314413861344Bacillus cereus AH187 chromosome, complete genomeTrkH family potassium uptake protein4e-97355
NC_011969:1437514:1439744143974414410871344Bacillus cereus Q1 chromosome, complete genomepotassium uptake protein, trkh family4e-97355
NC_016771:1397292:1399522139952214008651344Bacillus cereus NC7401, complete genomeTrkH family potassium uptake protein4e-97355
NC_014335:1329414:1331851133185113331941344Bacillus cereus biovar anthracis str. CI chromosome, completepotassium/sodium uptake protein3e-97355
NC_003997:1334000:1335076133507613364191344Bacillus anthracis str. Ames, complete genomepotassium uptake protein, TrkH family3e-97355
NC_007530:1332768:1335199133519913365421344Bacillus anthracis str. 'Ames Ancestor', complete genomepotassium uptake protein, trkh family3e-97355
NC_005945:1334000:1335145133514513364881344Bacillus anthracis str. Sterne, complete genomepotassium uptake protein, TrkH family3e-97355
NC_012581:2885519:2902653290265329039961344Bacillus anthracis str. CDC 684 chromosome, complete genomeTrkH family potassium uptake protein3e-97355
NC_012659:1334000:1335099133509913364421344Bacillus anthracis str. A0248, complete genomepotassium uptake protein, TrkH family3e-97355
NC_014976:1174430:1197858119785811991951338Bacillus subtilis BSn5 chromosome, complete genomepotassium transporter ATPase1e-96353
UCMB5137:2128500:2129178212917821305151338Bacillus atrophaeus UCMB-5137potassium transporter ATPase5e-91335
NC_007802:3575739:3612219361221936135681350Jannaschia sp. CCS1, complete genomeK+ transporter Trk4e-90332
NC_014965:2200974:2218747221874722201171371Vibrio vulnificus MO6-24/O chromosome I, complete sequencepotassium uptake protein, integral membrane component, KtrB1e-76287
NC_014098:2332938:2332938233293823342751338Bacillus tusciae DSM 2912 chromosome, complete genomepotassium uptake protein, TrkH family2e-72273
NC_014221:266638:2809972809972823551359Truepera radiovictrix DSM 17093 chromosome, complete genomepotassium uptake protein, TrkH family1e-71270
NC_014378:425779:4257794257794271161338Acetohalobium arabaticum DSM 5501 chromosome, complete genomepotassium uptake protein, TrkH family6e-71268
NC_019978:2071435:2092298209229820936321335Halobacteroides halobius DSM 5150, complete genomepotassium uptake protein, TrkH family2e-64246
NC_019978:2071435:2090202209020220915271326Halobacteroides halobius DSM 5150, complete genomepotassium uptake protein, TrkH family3e-63242
NC_014210:618500:6397136397136411341422Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,H(+)-transporting two-sector ATPase1e-52207
NC_011961:304158:3332593332593347041446Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequenceV-type sodium ATP synthase subunit J (Na(+)-translocating ATPase subunit J)7e-52205
NC_012225:47800:5909659096608531758Brachyspira hyodysenteriae WA1, complete genomecation transport protein TrkH2e-51203
NC_017208:1380870:138087013808701381517648Bacillus thuringiensis serovar chinensis CT-43 chromosome, completepotassium uptake protein KtrB6e-51201
NC_012781:3087467:3105370310537031067311362Eubacterium rectale ATCC 33656, complete genomehypothetical protein1e-50200
NC_013595:5221330:5221330522133052226881359Streptosporangium roseum DSM 43021, complete genomeH(+)-transporting two-sector ATPase2e-50200
NC_017243:2190000:2232236223223622339931758Brachyspira intermedia PWS/A chromosome, complete genomecation transport protein TrkH5e-50198
NC_015977:935798:9357989357989371351338Roseburia hominis A2-183 chromosome, complete genometrk system potassium uptake protein TrkH2e-48193
NC_007929:67810:8631086310876981389Lactobacillus salivarius subsp. salivarius UCC118, complete genomePotassium uptake protein ktrB3e-47189
NC_011295:929293:9499389499389512871350Coprothermobacter proteolyticus DSM 5265, complete genomeKtrB2e-46187
NC_013161:4209554:4216841421684142182051365Cyanothece sp. PCC 8802, complete genomepotassium uptake protein, TrkH family2e-43176
NC_004663:6104875:6113157611315761149861830Bacteroides thetaiotaomicron VPI-5482, complete genomeK+ uptake protein2e-41170
NC_014166:33138:4990249902512301329Arcobacter nitrofigilis DSM 7299 chromosome, complete genomepotassium uptake protein, TrkH family6e-41169
NC_015930:1397524:1401561140156114028981338Lactococcus garvieae ATCC 49156, complete genomepotassium transporter protein7e-39162
NC_013441:4539035:4547292454729245486231332Gordonia bronchialis DSM 43247, complete genomeH(+)-transporting two-sector ATPase4e-38159
NC_013440:5543667:5545397554539755475262130Haliangium ochraceum DSM 14365, complete genomeH(+)-transporting two-sector ATPase4e-38159
NC_014759:2099623:2117651211765121194711821Marivirga tractuosa DSM 4126 chromosome, complete genomeh(+)-transporting two-sector atpase5e-37155
NC_014759:2099623:2115804211580421176271824Marivirga tractuosa DSM 4126 chromosome, complete genomeh(+)-transporting two-sector atpase2e-36154
NC_014933:2195683:2211784221178422136131830Bacteroides helcogenes P 36-108 chromosome, complete genomeH(+)-transporting two-sector ATPase6e-34145
NC_015921:757776:7597977597977611191323Borrelia bissettii DN127 chromosome, complete genomepotassium uptake , TrkH family protein1e-33144
NC_014751:772912:8062828062828078831602Mycoplasma leachii PG50 chromosome, complete genomecation transport protein3e-31136
NC_007633:790881:8201018201018217021602Mycoplasma capricolum subsp. capricolum ATCC 27343, completepotassium uptake protein, TrkH family, putative4e-31135
NC_014014:397695:4169944169944186551662Mycoplasma crocodyli MP145 chromosome, complete genomepotassium uptake protein B3e-24113
NC_006055:183823:1882601882601899541695Mesoplasma florum L1, complete genomeK+, Na+ uptake protein bound cytoplasmic subunit8e-24112
NC_011961:304158:3348873348873362931407Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequencepotassium uptake protein KtrB, putative6e-23108
NC_000912:553539:5626585626585643551698Mycoplasma pneumoniae M129, complete genomeTrk-type K+ transport systems, membrane components5e-21102
NC_007955:545000:5543115543115557681458Methanococcoides burtonii DSM 6242, complete genomeTrk-type K+ transport systems membrane subunit2e-1067.8
NC_015474:328500:3459023459023473831482Pyrococcus sp. NA2 chromosome, complete genomeTRK system potassium uptake protein1e-0654.7
NC_009776:157311:1679671679671693551389Ignicoccus hospitalis KIN4/I, complete genomecation transporter1e-0654.7
NC_009464:379377:3813833813833828401458Uncultured methanogenic archaeon RC-I, complete genomeputative K(+) uptake system, membrane component3e-0653.9
NC_009033:1042500:1056534105653410579671434Staphylothermus marinus F1, complete genomecation transporter8e-0652