Pre_GI: BLASTP Hits

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Query: NC_004347:103967:117785 Shewanella oneidensis MR-1, complete genome

Start: 117785, End: 118621, Length: 837

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020064:2960332:298242129824212983209789Serratia marcescens FGI94, complete genomeformate dehydrogenase family accessory protein FdhD6e-65247
NC_010067:3538169:355565335556533556477825Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein9e-65246
NC_020063:4653422:467394946739494674701753Enterobacteriaceae bacterium strain FGI 57, complete genomeformate dehydrogenase family accessory protein FdhD2e-64245
NC_008570:2768795:277168227716822772539858Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeformate dehydrogenase family accessory protein FdhD6e-58224
NC_015424:2357600:235674323567432357603861Aeromonas veronii B565 chromosome, complete genomeformate dehydrogenase family accessory protein FdhD5e-57221
NC_009348:1893292:191121419112141912038825Aeromonas salmonicida subsp. salmonicida A449, complete genomeformate dehydrogenase family accessory protein FdhD9e-57220
NC_012559:768939:772266772266773111846Laribacter hongkongensis HLHK9, complete genomeFdhD5e-54211
NC_015723:961909:967746967746968591846Cupriavidus necator N-1 chromosome 2, complete sequenceformate dehydrogenase formation protein FdhD2e-51202
NC_008786:2687688:269255226925522693385834Verminephrobacter eiseniae EF01-2, complete genomeformate dehydrogenase family accessory protein FdhD8e-48190
NC_015556:4074367:410217641021764103027852Pseudomonas fulva 12-X chromosome, complete genomeformate dehydrogenase family accessory protein FdhD4e-39161
NC_013722:2476236:247884024788402479679840Xanthomonas albilineans, complete genomeputative formate dehydrogenase accessory protein1e-38160
NC_004578:6138669:613783661378366138672837Pseudomonas syringae pv. tomato str. DC3000, complete genomeformate dehydrogenase accessory protein FdhD2e-38159
NC_015138:4246787:4262100426210042633141215Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeprotein fdhD9e-37154
NC_011761:1412420:142381014238101424658849Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeformate dehydrogenase family accessory protein FdhD2e-29129
NC_011206:1293880:130562813056281306476849Acidithiobacillus ferrooxidans ATCC 53993, complete genomeformate dehydrogenase family accessory protein FdhD2e-29129
NC_016027:123853:153251153251154117867Gluconacetobacter xylinus NBRC 3288, complete genomeformate dehydrogenase family accessory protein7e-29127
NC_003106:91339:106786106786107553768Sulfolobus tokodaii str. 7, complete genomehypothetical formate dehydrogenase subunit fdhD6e-26117
NC_015711:2201225:2201225220122522026191395Myxococcus fulvus HW-1 chromosome, complete genomemolybdopterin-guanine dinucleotide biosynthesis protein B/ formate dehydrogenase family accessory protein FdhD2e-25115
NC_015065:162317:206694206694207629936Acidobacterium sp. MP5ACTX9 plasmid pACIX902, complete sequenceformate dehydrogenase family accessory protein FdhD5e-25114
NC_019673:1420198:144704114470411447865825Saccharothrix espanaensis DSM 44229 complete genomeFdhD-like protein4e-24112
NC_011773:3399531:341138934113893412186798Bacillus cereus AH820 chromosome, complete genomeformate dehydrogenase accessory protein2e-22106
NC_012623:231603:251540251540252307768Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeformate dehydrogenase family accessory protein FdhD5e-22105
NC_012588:2297497:230073723007372301504768Sulfolobus islandicus M.14.25 chromosome, complete genomeformate dehydrogenase family accessory protein FdhD4e-22105
NC_012632:2390831:239407123940712394838768Sulfolobus islandicus M.16.27 chromosome, complete genomeformate dehydrogenase family accessory protein FdhD4e-22105
NC_012726:2287880:229112022911202291887768Sulfolobus islandicus M.16.4 chromosome, complete genomeformate dehydrogenase family accessory protein FdhD4e-22105
NC_013769:2405248:240848824084882409255768Sulfolobus islandicus L.D.8.5 chromosome, complete genomeformate dehydrogenase family accessory protein FdhD3e-22105
NC_005945:3321600:333236333323633333160798Bacillus anthracis str. Sterne, complete genomeformate dehydrogenase accessory protein8e-22104
NC_003997:3320906:333166933316693332466798Bacillus anthracis str. Ames, complete genomeformate dehydrogenase accessory protein8e-22104
NC_007530:3321033:333179633317963332593798Bacillus anthracis str. 'Ames Ancestor', complete genomeformate dehydrogenase accessory protein8e-22104
NC_012581:897957:906149906149906946798Bacillus anthracis str. CDC 684 chromosome, complete genomeformate dehydrogenase accessory protein8e-22104
NC_012659:3320933:333169633316963332493798Bacillus anthracis str. A0248, complete genomeformate dehydrogenase accessory protein8e-22104
NC_017275:2327479:233318823331882333955768Sulfolobus islandicus HVE10/4 chromosome, complete genomeformate dehydrogenase family accessory protein FdhD7e-22104
NC_017276:2283933:229914622991462299913768Sulfolobus islandicus REY15A chromosome, complete genomeformate dehydrogenase family accessory protein FdhD7e-22104
NC_015573:2900906:290993129099312910731801Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeProtein fdhD6e-22104
NC_015562:1816000:183209618320961832785690Methanotorris igneus Kol 5 chromosome, complete genomeformate dehydrogenase family accessory protein FdhD8e-2097.8
NC_007907:4859735:487655548765554877355801Desulfitobacterium hafniense Y51, complete genomehypothetical protein9e-1994
NC_007575:827222:847911847911848741831Sulfurimonas denitrificans DSM 1251, complete genomeformate dehydrogenase accessory protein1e-1894
NC_018664:3073022:307424730742473075029783Clostridium acidurici 9a chromosome, complete genomeformate dehydrogenase accessory protein FdhD1e-1893.6
NC_015216:2548057:256605025660502566802753Methanobacterium sp. AL-21 chromosome, complete genomeprotein fdhD1e-1893.6
NC_009515:1409912:141251514125151413264750Methanobrevibacter smithii ATCC 35061, complete genomeformate dehydrogenase accessory protein FdhD, FdhD4e-1892
NC_018876:2628966:263721026372102638013804Methanolobus psychrophilus R15 chromosome, complete genomeformate dehydrogenase family accessory protein FdhD5e-1891.7
NC_010337:1999405:199940519994052000358954Heliobacterium modesticaldum Ice1, complete genomeformate dehydrogenase family accessory protein fdhd7e-1891.3
NC_014328:773095:781536781536781967432Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative formate dehydrogenase subunit FdhD8e-1890.9
NC_013204:2826500:287184028718402872685846Eggerthella lenta DSM 2243, complete genomeformate dehydrogenase family accessory protein FdhD6e-1788.2
NC_009850:1498111:150354615035461504379834Arcobacter butzleri RM4018, complete genomeFdhD/NarQ protein required for formate dehydrogenase activity1e-1687.4
NC_017187:1424371:142980414298041430637834Arcobacter butzleri ED-1, complete genomeformate dehydrogenase delta subunit1e-1687.4
NC_013315:3689422:371034737103473711180834Clostridium difficile CD196 chromosome, complete genomeformate dehydrogenase accessory protein9e-1787.4
NC_014654:2277461:227924522792452280060816Halanaerobium sp. 'sapolanicus' chromosome, complete genomeformate dehydrogenase family accessory protein FdhD3e-1685.9
NC_021184:2013058:201422420142242015018795Desulfotomaculum gibsoniae DSM 7213, complete genomeformate dehydrogenase family accessory protein FdhD2e-1583.6
NC_011146:2614500:2632077263207726334831407Geobacter bemidjiensis Bem, complete genomeformate dehydrogenase family accessory protein FdhD4e-1582
NC_019977:728922:737153737153737986834Methanomethylovorans hollandica DSM 15978, complete genomeformate dehydrogenase family accessory protein FdhD9e-1580.9
NC_015574:114426:133885133885134637753Methanobacterium sp. SWAN-1 chromosome, complete genomeProtein fdhD2e-1480.1
NC_018876:996855:102766910276691028442774Methanolobus psychrophilus R15 chromosome, complete genomeformate dehydrogenase family accessory protein FdhD2e-1479.7
NC_013939:1001974:101662110166211017415795Deferribacter desulfuricans SSM1, complete genomeformate dehydrogenase accessory protein FdhD2e-1376.3
NC_014311:1106871:110910411091041109979876Ralstonia solanacearum PSI07 chromosome, complete genomeformate dehydrogenase accessory protein (fdhD)1e-1273.9
NC_017096:1147441:115171411517141152415702Caldisericum exile AZM16c01, complete genomeputative FdhD protein1e-1170.9
NC_015320:1159613:115961311596131160284672Archaeoglobus veneficus SNP6 chromosome, complete genomeformate dehydrogenase family accessory protein FdhD1e-0963.9
NC_013741:565389:567615567615568196582Archaeoglobus profundus DSM 5631, complete genomeUncharacterized protein required for formate dehydrogenase activity-like protein1e-0860.5
NC_014931:3886405:390320439032043904115912Variovorax paradoxus EPS chromosome, complete genomeformate dehydrogenase subunit FdhD4e-0858.9
NC_012522:5847699:586396558639655864216252Rhodococcus opacus B4, complete genomeputative FdhD protein homolog8e-0857.8
NC_008825:1258500:126066312606631261562900Methylibium petroleiphilum PM1, complete genomeputative fdhD protein2e-0756.2
NC_018870:115982:163271163271163918648Thermacetogenium phaeum DSM 12270 chromosome, complete genomeformate dehydrogenase accessory protein FdhD6e-0755.1