Pre_GI: BLASTP Hits

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Query: NC_004337:3590323:3744967 Shigella flexneri 2a str. 301, complete genome

Start: 3744967, End: 3746115, Length: 1149

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated in 1984 from a patient in Beijing, China. It is similar to pathogenic Escherichia coli except for the more numerous insertion sequences and contains a virulence plasmid (pCP301). Causes enteric disease. Shigella This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016902:119935:1199351199351247854851Escherichia coli KO11FL chromosome, complete genomeYadA domain-containing protein2e-174611
NC_011748:4131924:4150188415018841550384851Escherichia coli 55989, complete genomeconserved hypothetical protein; putative exported adhesin2e-174611
CU928145:4131924:4150188415018841550384851Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein; putative exported adhesin2e-174611
CP002516:119935:1199351199351247854851Escherichia coli KO11, complete genomeYadA domain-containing protein2e-174611
NC_009801:4073968:4091324409132440961744851Escherichia coli E24377A, complete genomeputative haemagglutinins/invasins protein2e-174611
CP002185:3964500:3981288398128839861384851Escherichia coli W, complete genomeputative hemagglutinins/invasins protein2e-174611
NC_011415:4006500:4023357402335740282074851Escherichia coli SE11 chromosome, complete genomeputative autotransporter2e-174611
NC_012967:3696877:3712991371299137178414851Escherichia coli B str. REL606 chromosome, complete genomeputative adhesin2e-173608
NC_012947:126596:1265961265961314464851Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeYadA domain protein2e-173608
NC_010468:111504:1115041115041165285025Escherichia coli ATCC 8739, complete genome8e-136483
NC_009800:3787320:3804828380482838098525025Escherichia coli HS, complete genomeputative haemagglutinin8e-136483
NC_007606:3755155:3767585376758537687841200Shigella dysenteriae Sd197, complete genomehypothetical protein7e-120430
NC_010498:3988351:4013819401381940184684650Escherichia coli SMS-3-5, complete genomehaemagluttinin family protein4e-72271
NC_007435:1914375:1943828194382819456811854Burkholderia pseudomallei 1710b chromosome II, complete sequenceHep_Hag family6e-30131
NC_006351:101500:1052901052901072271938Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein7e-30131
NC_007606:3755155:3769333376933337718402508Shigella dysenteriae Sd197, complete genomehypothetical protein6e-27122
NC_009076:2050621:2076401207640120799613561Burkholderia pseudomallei 1106a chromosome I, complete sequenceputative outer membrane protein3e-25116
NC_013515:262025:2745262745262763281803Streptobacillus moniliformis DSM 12112, complete genomeYadA domain protein2e-23110
NC_013515:183088:2099952099952120702076Streptobacillus moniliformis DSM 12112, complete genomeYadA domain protein1e-22107
NC_013515:183088:2154892154892191813693Streptobacillus moniliformis DSM 12112, complete genomeYadA domain protein3e-2099.8
NC_015856:2488297:2517010251701025211464137Collimonas fungivorans Ter331 chromosome, complete genomehypothetical protein3e-2099.8
NC_007509:971500:9809839809839865475565Burkholderia sp. 383 chromosome 3, complete sequenceYadA/Haemagluttinin like protein1e-1997.8
NC_013515:1623407:1633582163358216375834002Streptobacillus moniliformis DSM 12112, complete genomeYadA domain protein8e-1995.1
NC_013520:1905554:1905554190555419080522499Veillonella parvula DSM 2008, complete genomeS-layer domain protein2e-1893.6
NC_015376:903939:9296989296989332313534Burkholderia gladioli BSR3 chromosome chromosome 2, completehemagglutinin2e-1893.6
NC_015873:1557999:1563459156345915672383780Megasphaera elsdenii DSM 20460, complete genomeputative S-layer y domain protein6e-1892
NC_009714:727679:7354507354507400004551Campylobacter hominis ATCC BAA-381, complete genomeouter membrane protein3e-1790.1
NC_020301:174467:1744671744671791704704Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomesurface protein/Bartonella adhesin3e-1789.7
NC_020829:3050817:3051698305169830558524155Pseudomonas denitrificans ATCC 13867, complete genomesurface protein4e-1789.4
NC_007434:2386036:2397108239710824020724965Burkholderia pseudomallei 1710b chromosome I, complete sequenceHep_Hag family protein/haemagluttinin motif family protein/YadA-like domain protein3e-1686.7
NC_006350:1938631:1982643198264319874634821Burkholderia pseudomallei K96243 chromosome 1, complete sequencehypothetical protein3e-1686.3
NC_014752:324832:3283623283623298251464Neisseria lactamica ST-640, complete genomesurface exposed protein8e-1685.1
NC_012846:199365:1993651993652061746810Bartonella grahamii as4aup, complete genomesurface protein/Bartonella adhesin1e-1584.3
NC_013520:91961:919619196110224410284Veillonella parvula DSM 2008, complete genomeHemagluttinin domain protein6e-1582
NC_008391:699222:7057837057837073931611Burkholderia cepacia AMMD chromosome 2, complete sequenceYadA C-terminal domain protein8e-1581.6
NC_015376:2061990:2074478207447820790434566Burkholderia gladioli BSR3 chromosome chromosome 2, completeputative membrane-anchored cell surface protein4e-1479.3
NC_013515:183088:1877721877721914103639Streptobacillus moniliformis DSM 12112, complete genomeYadA domain protein5e-1375.9
NC_016043:1563505:1576250157625015788052556Taylorella asinigenitalis MCE3 chromosome, complete genomehypothetical protein7e-1375.1
NC_014752:1331447:13340871334087134527011184Neisseria lactamica ST-640, complete genomeadhesin1e-1274.7
NC_010067:3538169:3550652355065235547644113Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-1272.8
NC_015382:172213:1851321851321913236192Burkholderia gladioli BSR3 plasmid bgla_1p, complete sequenceYadA domain-containing protein5e-1272.4
NC_012913:56258:6298862988692906303Aggregatibacter aphrophilus NJ8700, complete genomeextracellular matrix protein adhesin A1e-1171.2
NC_008309:190550:19700119700121243215432Haemophilus somnus 129PT, complete genomepossible large adhesin2e-1170.5
NC_010519:445936:4505814505814604509870Haemophilus somnus 2336 chromosome, complete genomeYadA domain-containing protein2e-1170.1
NC_010515:1618093:16314151631415164257111157Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceYadA domain protein4e-1169.7
NC_008309:842072:84713084713085889211763Haemophilus somnus 129PT, complete genomepossible large adhesin4e-1169.3
NC_015382:266000:1245612456159923537Burkholderia gladioli BSR3 plasmid bgla_1p, complete sequenceputative membrane-anchored cell surface protein6e-1168.9
NC_012846:199365:2173712173712227285358Bartonella grahamii as4aup, complete genomesurface protein/Bartonella adhesin7e-1168.6
NC_013515:262025:2680002680002742786279Streptobacillus moniliformis DSM 12112, complete genomeYadA domain protein8e-1168.6
NC_013515:1623407:1631515163151516333021788Streptobacillus moniliformis DSM 12112, complete genomeYadA domain protein8e-1168.6
NC_008309:385592:39411539411540683112717Haemophilus somnus 129PT, complete genomepossible large adhesin2e-1067
NC_010515:2111691:2111691211169121201358445Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceHaemagluttinin domain protein3e-1066.6
NC_013515:183088:1988011988012050766276Streptobacillus moniliformis DSM 12112, complete genomeYadA domain protein3e-1066.6
NC_007509:71954:7932279322833023981Burkholderia sp. 383 chromosome 3, complete sequenceHaemaglutinin/autotransporter like protein4e-1066.2
NC_009714:1329573:1334692133469213404425751Campylobacter hominis ATCC BAA-381, complete genomeputative adhesin4e-1065.9
NC_010515:1678487:1715055171505517182733219Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceYadA domain protein6e-1065.5
NC_008061:190287:1902871902871984738187Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceHaemagluttinin motif protein6e-1065.5
NC_015382:266000:86748674110102337Burkholderia gladioli BSR3 plasmid bgla_1p, complete sequenceYadA domain-containing protein2e-0964.3
NC_010519:796229:80439580439581541911025Haemophilus somnus 2336 chromosome, complete genomeYadA domain-containing protein1e-0964.3
NC_008309:1851189:1858163185816318669078745Haemophilus somnus 129PT, complete genomepossible large adhesin2e-0963.9
NC_014532:752807:7608027608027622321431Halomonas elongata DSM 2581, complete genomehaemagluttinin domain protein2e-0963.9
NC_016077:1876119:1890260189026018956355376Acidaminococcus intestini RyC-MR95 chromosome, complete genomeS-layer protein2e-0963.9
NC_015856:4342500:4367510436751043689851476Collimonas fungivorans Ter331 chromosome, complete genomehemagluttinin motif protein2e-0963.9
NC_015690:4361000:4428221442822144296391419Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein2e-0963.5
NC_016935:4117485:4194357419435741957751419Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein3e-0963.2
NC_012846:199365:22361022361023597812369Bartonella grahamii as4aup, complete genomesurface protein/Bartonella adhesin4e-0962.8
NC_016043:1563505:1569042156904215760376996Taylorella asinigenitalis MCE3 chromosome, complete genomehypothetical protein5e-0962.4
NC_013515:1623407:1640689164068916438863198Streptobacillus moniliformis DSM 12112, complete genomeYadA domain protein5e-0962.4
NC_010943:3069082:3090702309070230924621761Stenotrophomonas maltophilia K279a, complete genomeputative Hep Hag family adhesin2e-0860.5
NC_010161:205500:20807020807022317715108Bartonella tribocorum CIP 105476, complete genomeadhesin3e-0860.1
NC_013515:1623407:1638694163869416404121719Streptobacillus moniliformis DSM 12112, complete genomeYadA domain protein3e-0860.1
NC_015856:29338:4508245082468331752Collimonas fungivorans Ter331 chromosome, complete genomehypothetical protein4e-0859.3
NC_013515:416760:4233284233284295496222Streptobacillus moniliformis DSM 12112, complete genomeYadA domain protein6e-0858.9
NC_008309:502983:5091635091635177188556Haemophilus somnus 129PT, complete genomepossible cell-surface large adhesin8e-0858.5
NC_008309:1827809:1832041183204118412779237Haemophilus somnus 129PT, complete genomepossible large adhesin1e-0757.8
NC_013515:1623407:1644131164413116495725442Streptobacillus moniliformis DSM 12112, complete genomeYadA domain protein1e-0757.8
NC_012721:182965:1959981959981973171320Burkholderia glumae BGR1 chromosome 2, complete genomeMembrane-anchored cell surface protein1e-0757.8
NC_008309:1289370:12937551293755130441910665Haemophilus somnus 129PT, complete genomepossible large adhesin2e-0757.4
NC_008309:1200245:12035001203500121471311214Haemophilus somnus 129PT, complete genomepossible large adhesin2e-0757.4
NC_012846:199365:2067752067752129006126Bartonella grahamii as4aup, complete genomesurface protein/Bartonella adhesin2e-0757.4
NC_010519:1165418:11692911169291118054011250Haemophilus somnus 2336 chromosome, complete genomeYadA domain-containing protein2e-0757
NC_010519:71365:76675766758886612192Haemophilus somnus 2336 chromosome, complete genomeYadA domain-containing protein4e-0756.2
NC_005956:196976:2053782053782144889111Bartonella henselae str. Houston-1, complete genomeSurface protein/Bartonella adhesin5e-0755.8
NC_010554:2789722:2811965281196528141902226Proteus mirabilis HI4320, complete genomeadhesin5e-0755.8
NC_005956:196976:1969761969762021565181Bartonella henselae str. Houston-1, complete genomeSurface protein/Bartonella adhesin6e-0755.5
NC_009714:1329573:1340402134040213446194218Campylobacter hominis ATCC BAA-381, complete genomeputative large adhesin2e-0654.3
NC_013515:183088:2122792122792152752997Streptobacillus moniliformis DSM 12112, complete genomeYadA domain protein2e-0654.3
NC_007606:3755155:377192937719293772765837Shigella dysenteriae Sd197, complete genomehypothetical protein2e-0654.3
NC_004337:3590323:3746657374665737496292973Shigella flexneri 2a str. 301, complete genomehypothetical protein3e-0653.5
NC_013515:347671:3561113561113623386228Streptobacillus moniliformis DSM 12112, complete genomeYadA domain protein6e-0652.4