Pre_GI: BLASTP Hits

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Query: NC_004088:3923804:3937130 Yersinia pestis KIM, complete genome

Start: 3937130, End: 3937330, Length: 201

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:3790750:380249138024913802691201Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein7e-26115
NC_010634:4001154:401594940159494016149201Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein7e-26115
NC_003143:675622:683209683209683409201Yersinia pestis CO92, complete genomehypothetical protein7e-26115
NC_010159:1071937:108289610828961083096201Yersinia pestis Angola, complete genomehypothetical protein7e-26115
NC_008149:587689:594743594743594943201Yersinia pestis Nepal516, complete genomehypothetical protein7e-26115
NC_005810:3272765:327604132760413276241201Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein7e-26115
NC_008150:3495851:351003135100313510231201Yersinia pestis Antiqua, complete genomehypothetical protein7e-26115
NC_010465:660207:663483663483663683201Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein7e-26115
NC_009381:460358:465165465165465365201Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein7e-26115
NC_009708:633054:636330636330636530201Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein7e-26115
NC_006155:4062000:407571640757164075916201Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein7e-26115