Pre_GI: BLASTP Hits

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Query: NC_003228:3085793:3089688 Bacteroides fragilis NCTC 9343, complete genome

Start: 3089688, End: 3090575, Length: 888

Host Lineage: Bacteroides fragilis; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This organism can become an opportunistic pathogen, infecting anywhere in the body and causing abcess formation. Enterotoxigenic Bacterioides fragilis (ETBF) is associated with diarrheal diseases. Common gut bacterium. This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Although only a minor component of the human gut microflora, this organism is a major component of clinical specimens and is the most common anaerobe isolated.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009615:919495:925663925663926541879Parabacteroides distasonis ATCC 8503 chromosome, complete genometranscriptional regulator2e-35149
NC_004663:2437760:247120524712052472053849Bacteroides thetaiotaomicron VPI-5482, complete genometranscriptional regulator8e-27120
NC_004663:1365429:137704613770461377882837Bacteroides thetaiotaomicron VPI-5482, complete genomeAraC-type transcription regulator1e-25117
NC_014933:979063:983963983963984871909Bacteroides helcogenes P 36-108 chromosome, complete genometranscriptional regulator, AraC family2e-25116
NC_003228:2437288:244229724422972443136840Bacteroides fragilis NCTC 9343, complete genomeputative AraC-type transcriptional regulator4e-25115
NC_006347:2375480:238632923863292387168840Bacteroides fragilis YCH46, complete genomeAraC-type transcription regulator4e-25115
NC_016776:2516149:252699725269972527836840Bacteroides fragilis 638R, complete genomeputative AraC-type transcriptional regulator4e-25115
NC_014364:3633291:363889336388933639771879Spirochaeta smaragdinae DSM 11293 chromosome, complete genometranscriptional regulator, AraC family2e-24112
NC_016776:3973428:398739639873963988241846Bacteroides fragilis 638R, complete genomeputative AraC-family regulatory protein2e-23109
NC_003228:3934770:394874239487423949587846Bacteroides fragilis NCTC 9343, complete genomeputative AraC-family regulatory protein7e-23108
NC_013730:4502965:452139745213974522266870Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family7e-22104
NC_015164:1952500:195627119562711957128858Bacteroides salanitronis DSM 18170 chromosome, complete genometranscriptional regulator, AraC family1e-21103
NC_006347:854301:873322873322874197876Bacteroides fragilis YCH46, complete genomehypothetical protein4e-21102
NC_003228:793846:809965809965810840876Bacteroides fragilis NCTC 9343, complete genomeputative AraC-family regulatory protein3e-21102
NC_016776:844641:860760860760861635876Bacteroides fragilis 638R, complete genomeputative AraC-family regulatory protein3e-21102
NC_014933:3856561:387760838776083878456849Bacteroides helcogenes P 36-108 chromosome, complete genometranscriptional regulator, AraC family9e-21100
NC_004663:3680974:369676236967623697673912Bacteroides thetaiotaomicron VPI-5482, complete genomeputative transcriptional regulator5e-2098.6
NC_004663:2246756:224892422489242249814891Bacteroides thetaiotaomicron VPI-5482, complete genomeputative transcriptional regulator3e-1995.9
NC_006347:4031000:404498540449854045563579Bacteroides fragilis YCH46, complete genometranscriptional regulator3e-1892.4
NC_004129:926479:934135934135934989855Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, AraC family1e-1687.4
NC_015947:1937341:195358619535861954440855Burkholderia sp. JV3 chromosome, complete genomeAraC family transcriptional regulator9e-1684.3
NC_009614:3081190:309934830993483100256909Bacteroides vulgatus ATCC 8482 chromosome, complete genomehypothetical protein2e-1377
NC_016609:4233701:424485042448504245719870Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator2e-1376.6
NC_009441:5248791:526511952651195265988870Flavobacterium johnsoniae UW101 chromosome, complete genomehelix-turn-helix domain-containing protein2e-1376.6
NC_009441:4218434:423875042387504239445696Flavobacterium johnsoniae UW101 chromosome, complete genomehelix-turn-helix domain-containing protein2e-1376.3
NC_004547:1873390:188300518830051883862858Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeAraC-family transcriptional regulator6e-1374.7
NC_019960:306254:333554333554334501948Prevotella dentalis DSM 3688 chromosome 1, complete sequenceDNA-binding domain-containing protein, AraC-type7e-1271.6
NC_016114:7282882:730901673090167309861846Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeAraC family transcriptional regulator8e-1271.2
NC_013132:705314:708270708270709112843Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, AraC family2e-1169.7
NC_016609:1305570:130853413085341309397864Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator5e-1168.6
NC_013132:153163:156153156153157094942Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, AraC family7e-1168.2
NC_013132:6385223:640559164055916406514924Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, AraC family8e-1167.8
NC_013037:1015210:103550010355001036360861Dyadobacter fermentans DSM 18053, complete genometranscriptional regulator, AraC family1e-1067.8
NC_009901:3317068:332237033223703323242873Shewanella pealeana ATCC 700345, complete genometranscriptional regulator, AraC family1e-1067.4
NC_015311:2626850:264619326461932647041849Prevotella denticola F0289 chromosome, complete genomeAraC family transcriptional regulator1e-1067.4
NC_012914:5446366:5444810544481054463691560Paenibacillus sp. JDR-2, complete genometwo component transcriptional regulator, AraC family2e-1067
NC_009441:3522519:353988035398803540680801Flavobacterium johnsoniae UW101 chromosome, complete genomehelix-turn-helix domain-containing protein2e-1066.6
NC_013730:4502965:452028045202804521137858Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family2e-1066.6
NC_013730:4399643:440355544035554404475921Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family2e-1066.2
NC_004663:1409462:141252814125281413448921Bacteroides thetaiotaomicron VPI-5482, complete genometranscriptional regulator3e-1066.2
NC_002950:879930:883361883361884209849Porphyromonas gingivalis W83, complete genometranscriptional regulator, AraC family3e-1065.9
NC_002950:1511955:153145315314531532301849Porphyromonas gingivalis W83, complete genometranscriptional regulator, AraC family3e-1065.9
NC_014933:3791840:381156138115613812442882Bacteroides helcogenes P 36-108 chromosome, complete genomehelix-turn-helix- domain containing protein AraC type4e-1065.9
NC_015152:2549756:2614251261425126158431593Spirochaeta sp. Buddy chromosome, complete genomeAraC family transcriptional regulator6e-1065.1
NC_013730:778076:782821782821783741921Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family6e-1065.1
NC_018524:4988810:501243150124315012778348Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomebacterial regulatory helix-turn-helix s, AraC family protein1e-0963.9
NC_019968:1084288:110312511031251103973849Prevotella dentalis DSM 3688 chromosome 2, complete sequenceDNA-binding domain-containing protein, AraC-type2e-0963.2
NC_014933:3688000:370697437069743707867894Bacteroides helcogenes P 36-108 chromosome, complete genometranscriptional regulator, AraC family3e-0962.8
NC_015428:193817:211001211001211951951Lactobacillus buchneri NRRL B-30929 chromosome, complete genomeAraC family transcriptional regulator3e-0962.8
NC_020054:4161049:4187679418767941887041026Fibrella aestuarina BUZ 2 drat genometranscriptional regulator, AraC family4e-0962.4
NC_019673:3726519:373763037376303738475846Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator4e-0962.4
NC_004547:1837500:184938418493841850334951Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeAraC-family transcriptional regulator4e-0962
NC_018870:354164:3720013720013733231323Thermacetogenium phaeum DSM 12270 chromosome, complete genometranscriptional regulator, AraC family6e-0961.6
NC_020054:3132478:313830531383053139264960Fibrella aestuarina BUZ 2 drat genometranscriptional regulator, AraC family8e-0961.2
NC_012914:4238142:4239163423916342406771515Paenibacillus sp. JDR-2, complete genometwo component transcriptional regulator, AraC family9e-0961.2
NC_013730:2359939:235993923599392360808870Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family1e-0860.5
NC_012962:1041518:106408610640861064976891Photorhabdus asymbiotica, complete genomeregulator of the 4hpa-hydroxylase operon1e-0860.5
NC_009441:3562125:357912935791293579977849Flavobacterium johnsoniae UW101 chromosome, complete genomehelix-turn-helix domain-containing protein2e-0860.1
NC_016582:1639375:165691016569101657806897Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative transcriptional regulator2e-0860.1
NC_013406:1217385:1220860122086012224821623Paenibacillus sp. Y412MC10 chromosome, complete genometwo component AraC family transcriptional regulator3e-0859.3
NC_015703:4483500:451260045126004513517918Runella slithyformis DSM 19594 chromosome, complete genomeAraC family transcriptional regulator3e-0859.3
NC_016935:2347691:2401895240189524035051611Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein4e-0858.9
NC_014364:3500041:3508154350815435096831530Spirochaeta smaragdinae DSM 11293 chromosome, complete genometwo component transcriptional regulator, AraC family4e-0858.9
NC_020291:1045058:1049931104993110514631533Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometwo component transcriptional regulator, AraC family4e-0858.9
NC_015690:1818333:1872120187212018737301611Paenibacillus mucilaginosus KNP414 chromosome, complete genomeYbbB4e-0858.9
NC_012778:1778654:1778654177865417801981545Eubacterium eligens ATCC 27750, complete genometwo-component system, response regulator YesN5e-0858.5
NC_018681:5490963:551799755179975518839843Nocardia brasiliensis ATCC 700358 chromosome, complete genometranscriptional regulatory protein5e-0858.5
NC_013730:4573077:458463145846314585539909Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family5e-0858.5
NC_015732:30472:3390633906353961491Spirochaeta caldaria DSM 7334 chromosome, complete genometwo component AraC family transcriptional regulator1e-0757.8
NC_014479:3510972:351580535158053516671867Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeAraC family transcriptional regulator1e-0757.4
NC_017986:5605197:563115756311575632029873Pseudomonas putida ND6 chromosome, complete genomeHelix-turn-helix domain-containing protein1e-0757
NC_015846:2285017:2287061228706122899012841Capnocytophaga canimorsus Cc5 chromosome, complete genomeAutoinducer 2 sensor kinase/phosphatase luxQ2e-0757
NC_013730:4811911:482916548291654830043879Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family2e-0756.6
NC_014622:724000:725554725554726447894Paenibacillus polymyxa SC2 chromosome, complete genometranscriptional regulator3e-0756.2
NC_016935:1365463:1428425142842514300291605Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein3e-0755.8
NC_015690:3941113:4009017400901740106211605Paenibacillus mucilaginosus KNP414 chromosome, complete genomeYesN133e-0755.8
NC_008261:1249595:1267397126739712689171521Clostridium perfringens ATCC 13124, complete genometranscriptional regulator, AraC family4e-0755.8
NC_002570:1195356:1215893121589312174731581Bacillus halodurans C-125, complete genomehypothetical protein4e-0755.8
NC_010623:1961685:201867520186752019634960Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, AraC family5e-0755.5
NC_016609:2730449:273712227371222738024903Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator5e-0755.5
NC_014655:2366201:237290323729032373763861Leadbetterella byssophila DSM 17132 chromosome, complete genometranscriptional regulator, arac family4e-0755.5
NC_020210:1275031:134529713452971346094798Geobacillus sp. GHH01, complete genometwo-component response regulator4e-0755.5
NC_010338:4148667:416203941620394162932894Caulobacter sp. K31, complete genometranscriptional regulator, AraC family6e-0755.1
NC_009614:3476000:349131434913143492150837Bacteroides vulgatus ATCC 8482 chromosome, complete genometranscriptional regulator6e-0755.1
NC_003366:1122654:112669011266901127442753Clostridium perfringens str. 13, complete genometwo-component response regulator6e-0755.1
NC_008261:1332864:133755413375541338306753Clostridium perfringens ATCC 13124, complete genomeDNA-bindng response regulator, AraC family6e-0755.1
NC_013941:2928000:297033429703342971191858Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeAraC family transcriptional regulator6e-0755.1
NC_003228:2473956:247395624739562474882927Bacteroides fragilis NCTC 9343, complete genomeputative AraC family transcriptional regulator5e-0755.1
CP002516:1419413:141941314194131420270858Escherichia coli KO11, complete genometranscriptional regulator, AraC family5e-0755.1
NC_016902:1419413:141941314194131420270858Escherichia coli KO11FL chromosome, complete genomeAraC family transcriptional regulator5e-0755.1
NC_008497:1575884:1580281158028115813691089Lactobacillus brevis ATCC 367, complete genomeAraC-type DNA-binding protein7e-0754.7
NC_013960:243884:2548952548952559321038Nitrosococcus halophilus Nc4 chromosome, complete genomehelix-turn-helix domain-containing protein AraC type7e-0754.7
NC_015376:1752883:177295817729581773878921Burkholderia gladioli BSR3 chromosome chromosome 2, completeAraC family transcriptional regulator9e-0754.7
NC_010468:4059436:405943640594364060326891Escherichia coli ATCC 8739, complete genometranscriptional regulator, AraC family9e-0754.3
NC_013132:4355363:439114343911434392060918Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, AraC family1e-0653.9
NC_013132:7204082:722428772242877225204918Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, AraC family1e-0653.9
NC_016609:2150863:219593621959362196844909Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator2e-0653.1
NC_015690:4592582:4614154461415446153981245Paenibacillus mucilaginosus KNP414 chromosome, complete genometwo component AraC family transcriptional regulator2e-0653.1
NC_019897:3251639:3253455325345532550831629Thermobacillus composti KWC4 chromosome, complete genomeresponse regulator containing CheY-like receiver domain and AraC-type DNA-binding domain2e-0653.1
NC_016609:6022778:603476460347646035642879Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator3e-0652.8
NC_015690:1726000:1761079176107917627251647Paenibacillus mucilaginosus KNP414 chromosome, complete genometwo component AraC family transcriptional regulator3e-0652.8
NC_014041:1395761:140434314043431404846504Zunongwangia profunda SM-A87 chromosome, complete genome4-hydroxyphenylacetate catabolism regulatory protein HpaA3e-0652.8
NC_016935:2256000:2291119229111922927651647Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator3e-0652.8
NC_013132:1652477:165247716524771653346870Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, AraC family3e-0652.8
NC_015519:1888917:1901250190125019028631614Tepidanaerobacter sp. Re1 chromosome, complete genomeAraC family two component transcriptional regulator4e-0652.4
NC_020210:1908000:1918917191891719204611545Geobacillus sp. GHH01, complete genometwo-component response regulator4e-0652.4
NC_003366:255480:290151290151290909759Clostridium perfringens str. 13, complete genomeprobable transcriptional regulator4e-0652.4
NC_013406:4323338:433746343374634338056594Paenibacillus sp. Y412MC10 chromosome, complete genomeAraC family transcriptional regulator4e-0652.4
NC_014934:4834000:483478048347804835673894Cellulophaga algicola DSM 14237 chromosome, complete genometranscriptional regulator, arac family4e-0652.4
NC_014206:1745203:1755349175534917568931545Geobacillus sp. C56-T3 chromosome, complete genomeAraC family transcriptional regulator3e-0652.4
NC_014624:1840209:1866679186667918680071329Eubacterium limosum KIST612 chromosome, complete genometranscriptional regulator3e-0652.4
NC_009328:3322802:3356777335677733578771101Geobacillus thermodenitrificans NG80-2 chromosome, complete genomesugar ABC transporter permease5e-0652
NC_021184:3149000:316585831658583166829972Desulfotomaculum gibsoniae DSM 7213, complete genomeresponse regulator containing CheY-like receiver domain and AraC-type DNA-binding domain7e-0651.6
NC_014720:154111:1778311778311802002370Caldicellulosiruptor kronotskyensis 2002 chromosome, completetranscriptional regulator, arac family7e-0651.6
NC_016609:606000:611143611143612063921Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator7e-0651.6
NC_015436:1287873:128864712886471289450804Spirochaeta coccoides DSM 17374 chromosome, complete genometranscriptional regulator, AraC family8e-0651.2
NC_016935:2302055:231539223153922316270879Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator1e-0551.2