Pre_GI: BLASTP Hits

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Query: NC_003143:3583468:3583468 Yersinia pestis CO92, complete genome

Start: 3583468, End: 3584226, Length: 759

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a recent Orientalis subtype isolated in the USA from a patient who died of pneumonic plague after acquiring the disease from an infected cat. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017168:2158839:217774121777412178499759Yersinia pestis A1122 chromosome, complete genomeYcgR family protein6e-147520
NC_005810:754340:774092774092774850759Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein6e-147520
NC_010159:3502350:350235035023503503108759Yersinia pestis Angola, complete genomepilZ family protein6e-147520
NC_004088:1075454:109435610943561095114759Yersinia pestis KIM, complete genomehypothetical protein6e-147520
NC_014029:3633955:363395536339553634713759Yersinia pestis Z176003 chromosome, complete genomehypothetical protein6e-147520
NC_017154:3576256:357625635762563577014759Yersinia pestis D106004 chromosome, complete genomehypothetical protein6e-147520
NC_017160:3560153:356015335601533560911759Yersinia pestis D182038 chromosome, complete genomehypothetical protein6e-147520
NC_010634:1056441:107613710761371076895759Yersinia pseudotuberculosis PB1/+, complete genomeYcgR family protein2e-145514
NC_006155:1074298:109399410939941094752759Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein2e-145514
NC_008150:3015000:301514630151463015895750Yersinia pestis Antiqua, complete genomehypothetical protein8e-145512
NC_008149:1002453:102136410213641022113750Yersinia pestis Nepal516, complete genomehypothetical protein8e-145512
NC_009708:3542336:354233635423363543085750Yersinia pseudotuberculosis IP 31758 chromosome, complete genomepilZ family protein4e-144510
NC_016816:2782373:279964827996482800382735Pantoea ananatis LMG 5342, complete genomeYcgR regulator family protein6e-47187
NC_010694:2189652:219184921918492192598750Erwinia tasmaniensis, complete genomePutative inner membrane protein7e-44177
NC_009138:1843998:189192318919231892678756Herminiimonas arsenicoxydans, complete genomehypothetical protein8e-1270.9
NC_015731:990000:997585997585998361777Nitrosomonas sp. Is79A3 chromosome, complete genomeYcgR family protein2e-1169.7
NC_016616:1861852:186796518679651868777813Dechlorosoma suillum PS chromosome, complete genomeputative glycosyltransferase1e-0963.9
NC_015572:1974000:199171819917181992455738Methylomonas methanica MC09 chromosome, complete genomeYcgR family protein3e-0858.9
NC_010694:715500:725703725703726413711Erwinia tasmaniensis, complete genomehypothetical protein1e-0653.5
NC_013722:1577818:157781815778181578612795Xanthomonas albilineans, complete genomehypothetical protein6e-0651.6