Pre_GI: BLASTP Hits

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Query: NC_002947:4994335:5031207 Pseudomonas putida KT2440, complete genome

Start: 5031207, End: 5032505, Length: 1299

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020541:1717140:1719831171983117211111281Rhodanobacter sp. 2APBS1, complete genomeglycine/D-amino acid oxidase, deaminating0666
NC_008313:886248:8909268909268922301305Ralstonia eutropha H16 chromosome 1, complete sequenceD-amino-acid dehydrogenase4e-163574
NC_020211:2985157:2988936298893629902401305Serratia marcescens WW4, complete genomeD-amino acid dehydrogenase2e-160565
NC_014500:2525880:2539624253962425408741251Dickeya dadantii 3937 chromosome, complete genomeD-amino acid dehydrogenase1e-156553
NC_014931:3886405:3887567388756738888261260Variovorax paradoxus EPS chromosome, complete genomeFAD dependent oxidoreductase1e-156552
NC_012912:2285778:2288432228843222896821251Dickeya zeae Ech1591, complete genomeD-amino-acid dehydrogenase3e-154545
NC_020181:734477:7507297507297520271299Enterobacter aerogenes EA1509E, complete genomeD-amino acid dehydrogenase small subunit2e-154545
NC_013282:2582720:2582720258272025840031284Cronobacter turicensis, complete genomeD-amino acid dehydrogenase small subunit4e-152538
NC_018000:1914945:1962052196205219633021251Sinorhizobium fredii USDA 257 chromosome, complete genomeD-amino acid dehydrogenase small subunit DadA2e-143508
NC_009952:526456:5450545450545463131260Dinoroseobacter shibae DFL 12, complete genomeD-amino-acid dehydrogenase small subunit7e-141500
NC_010125:2483122:2509050250905025103031254Gluconacetobacter diazotrophicus PAl 5, complete genomeputative D-amino acid dehydrogenase small subunit2e-140499
NC_011365:738321:7623657623657636181254Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeD-amino-acid dehydrogenase2e-140499
NC_015424:2316228:2353902235390223551671266Aeromonas veronii B565 chromosome, complete genomeD-amino acid dehydrogenase small subunit5e-139494
NC_013456:3011518:3011518301151830127741257Vibrio sp. Ex25 chromosome 1, complete genomeD-amino acid dehydrogenase small subunit2e-138492
NC_017505:148644:1726361726361738921257Neisseria meningitidis alpha710 chromosome, complete genomeD-amino acid dehydrogenase small subunit2e-137489
NC_017513:141291:1643701643701656261257Neisseria meningitidis G2136 chromosome, complete genomeD-amino acid dehydrogenase small subunit2e-137489
NC_003112:149593:1723461723461736021257Neisseria meningitidis MC58, complete genomeD-amino acid dehydrogenase small subunit2e-137489
NC_017516:149657:1724081724081736641257Neisseria meningitidis H44/76 chromosome, complete genomeD-amino acid dehydrogenase small subunit2e-137489
NC_017515:155634:1783901783901796461257Neisseria meningitidis M04-240196 chromosome, complete genomeD-amino acid dehydrogenase small subunit3e-137488
NC_008767:136958:1600371600371612931257Neisseria meningitidis FAM18, complete genomeD-amino acid dehydrogenase small subunit2e-136485
NC_017517:153379:1758351758351770911257Neisseria meningitidis M01-240355 chromosome, complete genomeD-amino acid dehydrogenase small subunit3e-136485
NC_017518:150991:1737591737591750151257Neisseria meningitidis NZ-05/33 chromosome, complete genomeD-amino acid dehydrogenase small subunit6e-136484
NC_017501:147933:1714321714321726881257Neisseria meningitidis 8013, complete genomeD-amino acid dehydrogenase small subunit4e-135481
NC_017511:1936331:1964446196444619657051260Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeD-amino acid dehydrogenase small subunit8e-130464
NC_011035:2027916:2056102205610220573611260Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeD-amino acid dehydrogenase small subunit8e-130464
NC_011992:3375929:3375929337592933772391311Acidovorax ebreus TPSY, complete genomeD-amino-acid dehydrogenase1e-105383
NC_012791:821371:8213718213718226721302Variovorax paradoxus S110 chromosome 1, complete genomeD-amino-acid dehydrogenase3e-101369
NC_010524:1005355:1010746101074610120531308Leptothrix cholodnii SP-6, complete genomeD-amino-acid dehydrogenase2e-85316
NC_015856:633353:6512716512716525391269Collimonas fungivorans Ter331 chromosome, complete genomeD-amino acid dehydrogenase small subunit7e-67254
NC_009085:1232890:125257312525731253529957Acinetobacter baumannii ATCC 17978, complete genomeD-amino-acid dehydrogenase6e-38158
NC_015656:1876627:1879602187960218809211320Frankia symbiont of Datisca glomerata chromosome, complete genomeD-amino-acid dehydrogenase1e-35151
NC_008148:2231045:2267216226721622685021287Rubrobacter xylanophilus DSM 9941, complete genomeFAD dependent oxidoreductase2e-31137
NC_003047:3360000:3380522338052233818111290Sinorhizobium meliloti 1021, complete genomePUTATIVE AMINO ACID DEHYDROGENASE TRANSMEMBRANE PROTEIN2e-30133
NC_003911:3864852:3867798386779838690631266Silicibacter pomeroyi DSS-3, complete genomeoxidoreductase, FAD-binding6e-29129
NC_017192:1000096:1003301100330110045511251Arcobacter sp. L, complete genomeD-amino acid dehydrogenase1e-28127
NC_018644:516157:5168995168995181251227Alpha proteobacterium HIMB59 chromosome, complete genomeFAD dependent oxidoreductase4e-28126
NC_011894:4013830:4043380404338040446151236Methylobacterium nodulans ORS 2060, complete genomeFAD dependent oxidoreductase1e-27124
NC_002678:5060670:5101501510150151027361236Mesorhizobium loti MAFF303099, complete genomeD-amino acid dehydrogenase, small subunit4e-26119
NC_011894:6485500:6494069649406964953431275Methylobacterium nodulans ORS 2060, complete genomeFAD dependent oxidoreductase4e-26119
NC_004129:2440744:2453807245380724550481242Pseudomonas fluorescens Pf-5, complete genomeD-amino acid dehydrogenase, small subunit family protein9e-26118
NC_010511:4258000:4286424428642442876591236Methylobacterium sp. 4-46 chromosome, complete genomeFAD dependent oxidoreductase1e-23111
NC_015727:1076927:1083362108336210846691308Cupriavidus necator N-1 plasmid BB1p, complete sequenceD-amino acid dehydrogenase small subunit3e-23110
NC_018080:5192264:5197779519777951988551077Pseudomonas aeruginosa DK2 chromosome, complete genomeD-amino acid oxidase3e-23109
NC_011894:4013830:4028116402811640293511236Methylobacterium nodulans ORS 2060, complete genomeFAD dependent oxidoreductase3e-21103
NC_008463:5364428:5368835536883553699291095Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative Glycine/D-amino acid oxidases7e-21102
NC_017986:4124335:4152037415203741532841248Pseudomonas putida ND6 chromosome, complete genomeFAD dependent oxidoreductase6e-21102
NC_015410:1144272:1156632115663211576961065Pseudomonas mendocina NK-01 chromosome, complete genomeglycine oxidase ThiO5e-21102
NC_015556:4118304:4123843412384341249161074Pseudomonas fulva 12-X chromosome, complete genomeglycine oxidase ThiO2e-20100
NC_015740:926920:9394409394409405371098Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeFAD-binding oxidoreductase2e-20100
NC_015957:7348269:7378287737828773794651179Streptomyces violaceusniger Tu 4113 chromosome, complete genomeFAD dependent oxidoreductase3e-20100
NC_009439:1075170:1088508108850810895931086Pseudomonas mendocina ymp, complete genomeglycine oxidase ThiO7e-2098.6
NC_009434:1068281:108088810808881081748861Pseudomonas stutzeri A1501, complete genomeoxidoreductase, FAD-binding2e-1997.1
NC_011901:3363500:3380830338083033819481119Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeglycine oxidase ThiO2e-1687.4
NC_014394:2228470:2232697223269722337611065Gallionella capsiferriformans ES-2 chromosome, complete genomeglycine oxidase ThiO2e-1687.4
NC_007516:2277910:2302913230291323039801068Synechococcus sp. CC9605, complete genomeputative thiamine biosynthesis oxidoreductase2e-1584
NC_016745:546249:5502995502995516091311Oceanimonas sp. GK1 chromosome, complete genomeFAD dependent oxidoreductase6e-1582.4
NC_017030:4588167:4606880460688046079951116Corallococcus coralloides DSM 2259 chromosome, complete genomeglycine oxidase ThiO2e-1480.9
NC_009482:2051890:2068353206835320694951143Synechococcus sp. RCC307 chromosome, complete genomeglycine/D-amino acid oxidase family protein3e-1480.1
NC_013757:3012130:3010874301087430121331260Geodermatophilus obscurus DSM 43160, complete genomesarcosine oxidase, beta subunit family1e-1378.2
NC_016641:2773757:2781634278163427828421209Paenibacillus terrae HPL-003 chromosome, complete genomesarcosine oxidase subunit beta1e-1378.2
NC_010730:741842:7791637791637802601098Sulfurihydrogenibium sp. YO3AOP1, complete genomeglycine oxidase ThiO2e-1377
NC_012589:1241782:1248691124869112497881098Sulfolobus islandicus L.S.2.15, complete genomeFAD dependent oxidoreductase4e-1376.6
NC_013523:2560000:2574631257463125757641134Sphaerobacter thermophilus DSM 20745 chromosome 1, complete genomeFAD dependent oxidoreductase5e-1376.3
NC_002754:824180:8413798413798424761098Sulfolobus solfataricus P2, complete genomeOxidoreductase, putative4e-1376.3
NC_012632:1249334:1259325125932512604221098Sulfolobus islandicus M.16.27 chromosome, complete genomeFAD dependent oxidoreductase4e-1376.3
NC_012792:547967:577220577220577417198Variovorax paradoxus S110 chromosome 2, complete genome1e-1275.1
NC_017955:3057592:3064499306449930657191221Modestobacter marinus, complete genomesarcosine oxidase subunit beta6e-1272.4
NC_012792:310443:3104433104433133972955Variovorax paradoxus S110 chromosome 2, complete genomeFAD dependent oxidoreductase7e-1168.9
NC_014831:2201246:2223388222338822245871200Thermaerobacter marianensis DSM 12885 chromosome, complete genomeglycine oxidase ThiO6e-1168.9
NC_005945:754517:7561427561427572511110Bacillus anthracis str. Sterne, complete genomeglycine oxidase2e-1067.4
NC_018643:641360:6504746504746517271254Alpha proteobacterium HIMB5 chromosome, complete genomesarcosine oxidase, beta subunit family, heterotetrameric form4e-1066.2
NC_009481:2204629:2206182220618222073091128Synechococcus sp. WH 7803 chromosome, complete genomeglycine/D-amino acid oxidase family protein5e-1066.2
NC_007948:4646344:4669711466971146708291119Polaromonas sp. JS666, complete genomeFAD dependent oxidoreductase2e-0964.3
NC_002928:3781657:3789612378961237908651254Bordetella parapertussis 12822, complete genomesarcosine oxidase beta subunit6e-0962.4
NC_015942:1711026:1727085172708517281761092Acidithiobacillus ferrivorans SS3 chromosome, complete genomeFAD dependent oxidoreductase8e-0962
NC_005125:2269343:2288011228801122890661056Gloeobacter violaceus PCC 7421, complete genomeprobable oxidoreductase1e-0861.6
NC_003910:2588000:2595357259535725966071251Colwellia psychrerythraea 34H, complete genomesarcosine oxidase, beta subunit5e-0859.3
NC_003910:4234000:4238988423898842402381251Colwellia psychrerythraea 34H, complete genomesarcosine oxidase, beta subunit5e-0859.3
NC_021171:1689518:1704959170495917060681110Bacillus sp. 1NLA3E, complete genomeFAD-dependent glycine oxidase ThiO9e-0858.5
NC_017059:2771085:2790005279000527912491245Rhodospirillum photometricum DSM 122, complete genomeFAD dependent oxidoreductase1e-0758.2
NC_008260:497855:5104435104435114801038Alcanivorax borkumensis SK2, complete genomeoxidoreductase2e-0757.8
NC_010511:4313769:4313769431376943163002532Methylobacterium sp. 4-46 chromosome, complete genomeFAD dependent oxidoreductase2e-0757.4
NC_007952:1587500:1602497160249716037411245Burkholderia xenovorans LB400 chromosome 2, complete sequenceSarcosine oxidase, beta subunit, heterotetrameric3e-0756.6
NC_019896:2805098:2830603283060328317121110Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeGlycine oxidase6e-0755.8
NC_016642:1913432:1944993194499319461381146Pseudovibrio sp. FO-BEG1 chromosome, complete genomesarcosine oxidase, beta subunit family protein9e-0755.5
NC_015172:1075592:1104747110474711058681122Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeGlycine oxidase8e-0755.5
NC_008148:2498000:2507596250759625088371242Rubrobacter xylanophilus DSM 9941, complete genomeFAD dependent oxidoreductase8e-0755.5
NC_014310:1822751:1848084184808418495381455Ralstonia solanacearum PSI07 megaplasmid, complete sequenceFAD-dependent oxidoreductase4e-0652.8
NC_014815:4621552:4650013465001346511611149Micromonospora sp. L5 chromosome, complete genomefad dependent oxidoreductase5e-0652.8
NC_008343:88184:9147191471927241254Granulibacter bethesdensis CGDNIH1, complete genomesarcosine oxidase beta subunit7e-0652.4
NC_015376:2061990:208181920818192082019201Burkholderia gladioli BSR3 chromosome chromosome 2, complete9e-0652