Pre_GI: BLASTP Hits

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Query: NC_002528:505951:516796 Buchnera aphidicola str. APS (Acyrthosiphon pisum), complete

Start: 516796, End: 517686, Length: 891

Host Lineage: Buchnera aphidicola; Buchnera; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is found in the pea aphid, Acyrthosiphon pisum.Aphid endosymbiont. Almost all aphids contain maternally transmitted bacteriocyte cells, which themselves contain bacteria called Buchnera. The aphids live on a restricted diet (plant sap), rich in carbohydrates, but poor in nitrogenous or other essential compounds. It is believed that the Buchnera provide the essential nutrients the host lacks. Besides a nutritional co-dependence, due to a co-existence of millions of years, Buchnera have lost the ability to produce cell surface components such as lipopolysaccharides. This makes for an obligate endosymbiont relationship between host and Buchnera. Buchnera are prokaryotic cells which belong to the gamma-Proteobacteria, closely related to the Enterobacteriaceae family. Phylogenetic studies using 16S rRNA indicate that the symbiotic relationship was established around 200-250 million years ago. Since Buchnera are closely related to Escherichia coli and Haemophilus influenzae, comparative genomic studies can shed light on the evolutionary mechanisms of intracellular endosymbiosis as well as the different underlying molecular basis between organisms with parasitic behavior and symbionts.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017253:509494:517697517697518614918Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) chromosome,cytochrome O ubiquinol oxidase subunit II6e-150530
NC_017256:515579:517572517572518492921Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) chromosome,cytochrome O ubiquinol oxidase subunit II2e-115415
NC_017259:480656:495681495681496628948Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,cytochrome O ubiquinol oxidase subunit II1e-106385
NC_004061:498483:517907517907518779873Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomecytochrome O ubiquinol oxidase A2e-93342
NC_015663:2694373:272831827283182729262945Enterobacter aerogenes KCTC 2190 chromosome, complete genomecytochrome o ubiquinol oxidase subunit II8e-67253
NC_012779:2127542:214110021411002141972873Edwardsiella ictaluri 93-146, complete genomeubiquinol oxidase, subunit II, putative2e-62239
NC_020181:2714559:271664127166412717459819Enterobacter aerogenes EA1509E, complete genomeCytochrome O ubiquinol oxidase subunit II7e-62237
NC_007508:1446526:146439714643971465332936Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomecytochrome O ubiquinol oxidase subunit II1e-61236
NC_010682:3313944:331394433139443314906963Ralstonia pickettii 12J chromosome 1, complete sequenceubiquinol oxidase, subunit II9e-59227
NC_015497:3614817:362581436258143626749936Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeubiquinol oxidase, subunit II8e-57220
NC_004129:5781413:579520357952035796147945Pseudomonas fluorescens Pf-5, complete genomecytochrome o ubiquinol oxidase, subunit II4e-54211
NC_009654:91096:99838998381008841047Marinomonas sp. MWYL1, complete genomeubiquinol oxidase, subunit II1e-53210
NC_020209:1986503:202134720213472022279933Pseudomonas poae RE*1-1-14, complete genomecytochrome o ubiquinol oxidase subunit II2e-53209
NC_016632:1049510:105147910514791052462984Serratia symbiotica str. 'Cinara cedri' chromosome, completecytochrome o ubiquinol oxidase subunit II1e-52206
NC_010943:1379707:1393703139370313947431041Stenotrophomonas maltophilia K279a, complete genomeputative transmembrane ubiquinol oxidase subunit 2 precursor2e-51202
NC_015723:1047418:1047418104741810484551038Cupriavidus necator N-1 chromosome 2, complete sequenceubiquinol oxidase subunit II8e-51200
NC_014910:2045088:206712720671272068116990Alicycliphilus denitrificans BC chromosome, complete genomeubiquinol oxidase, subunit ii3e-48192
NC_020300:131782:142981142981143952972Bartonella australis Aust/NH1, complete genomecytochrome o ubiquinol oxidase subunit II6e-46184
NC_005955:139907:150857150857151828972Bartonella quintana str. Toulouse, complete genomeCytochrome o ubiquinol oxidase subunit II8e-46184
NC_005956:152497:163432163432164403972Bartonella henselae str. Houston-1, complete genomeCytochrome o ubiquinol oxidase subunit II6e-43174
NC_018677:111500:143194143194144012819Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, completeCytochrome O ubiquinol oxidase subunit II5e-41168
NC_015675:4493758:4498924449892444999461023Mesorhizobium opportunistum WSM2075 chromosome, complete genomeubiquinol oxidase subunit II4e-39162
NC_004337:367687:384315384315384812498Shigella flexneri 2a str. 301, complete genome4e-35148
NC_013205:526281:567538567538568434897Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,cytochrome c oxidase subunit II3e-33142
NC_015942:1047576:105388010538801054851972Acidithiobacillus ferrivorans SS3 chromosome, complete genomecytochrome c oxidase subunit II2e-32139
NC_015850:169180:186371186371187342972Acidithiobacillus caldus SM-1 chromosome, complete genomecytochrome O ubiquinol oxidase subunit II3e-31135
NC_017328:385552:402179402179402646468Shigella flexneri 2002017 chromosome, complete genomeUbiquinol oxidase subunit 23e-30132
NC_008258:401786:421966421966422433468Shigella flexneri 5 str. 8401, complete genome3e-30132
NC_004741:366822:383448383448383915468Shigella flexneri 2a str. 2457T, complete genome3e-30132
NC_015850:2259769:227731122773112278279969Acidithiobacillus caldus SM-1 chromosome, complete genomecytochrome O ubiquinol oxidase subunit II1e-23110
NC_002976:638799:6407876407876419111125Staphylococcus epidermidis RP62A, complete genomequinol oxidase, subunit II8e-24110
NC_004461:746284:7482727482727493961125Staphylococcus epidermidis ATCC 12228, complete genomequinol oxidase polypeptide II QoxA8e-24110
NC_020164:1784223:1801503180150318026121110Staphylococcus warneri SG1, complete genomehypothetical protein2e-23109
NC_015387:1965711:1969300196930019703371038Marinithermus hydrothermalis DSM 14884 chromosome, complete genomecytochrome c oxidase, subunit II3e-1582.8
NC_013743:1937125:195011219501121950882771Haloterrigena turkmenica DSM 5511, complete genomecytochrome c oxidase, subunit II6e-1478.6
NC_019962:2189432:219479521947952195562768Natrinema pellirubrum DSM 15624, complete genomecytochrome c oxidase, subunit II4e-1375.5
NC_011884:1029328:1046238104623810472931056Cyanothece sp. PCC 7425, complete genomeCytochrome-c oxidase4e-1168.9
NC_009523:2769154:2789624278962427907271104Roseiflexus sp. RS-1 chromosome, complete genomecytochrome c oxidase subunit II7e-1168.2
NC_005125:760721:790660790660791619960Gloeobacter violaceus PCC 7421, complete genomecytochrome c oxidase subunit II1e-1067.4
NC_009956:88354:1163591163591173961038Dinoroseobacter shibae DFL 12 plasmid pDSHI02, complete sequencecytochrome c oxidase subunit II2e-1067
NC_017278:48630:5221952219532321014Thermus sp. CCB_US3_UF1 chromosome, complete genomeCytochrome c oxidase subunit 24e-1065.5
NC_012791:721813:756946756946757914969Variovorax paradoxus S110 chromosome 1, complete genomecytochrome c oxidase, subunit II2e-0963.5
NC_014315:1463383:1469871146987114709171047Nitrosococcus watsoni C-113 chromosome, complete genomecytochrome c oxidase subunit II2e-0963.2
NC_016626:1592781:161440916144091615404996Burkholderia sp. YI23 plasmid byi_1p, complete sequencecytochrome C oxidase subunit II2e-0859.7
NC_006396:2057209:205639720563972057212816Haloarcula marismortui ATCC 43049 chromosome I, complete sequencecytochrome C oxidase subunit II membrane domain3e-0859.3
NC_018645:1798874:180155918015591802170612Desulfobacula toluolica Tol2, complete genomecytochrome c oxidase, subunit II CtaC4e-0858.9
NC_010547:31444:539375393754818882Cyanothece sp. ATCC 51142 chromosome linear, complete sequencecytochrome c oxidase subunit II7e-0858.2
NC_010172:57500:1009241009241019281005Methylobacterium extorquens PA1, complete genomecytochrome c oxidase, subunit II8e-0858.2
NC_008312:409830:430086430086430994909Trichodesmium erythraeum IMS101, complete genomecytochrome c oxidase, subunit II1e-0757.4
NC_015387:1965711:197618719761871976987801Marinithermus hydrothermalis DSM 14884 chromosome, complete genomecytochrome c oxidase, subunit II1e-0757.4
NC_007798:520109:542756542756543523768Neorickettsia sennetsu str. Miyayama, complete genomecytochrome c oxidase, subunit II3e-0755.8
NC_014973:54449:544495444955339891Geobacter sp. M18 chromosome, complete genomecytochrome c oxidase subunit II5e-0755.1
NC_007947:1556437:1558944155894415599841041Methylobacillus flagellatus KT, complete genomecytochrome c oxidase, subunit II1e-0654.3
NC_007484:1975322:1989467198946719905251059Nitrosococcus oceani ATCC 19707, complete genomeCytochrome c oxidase, subunit II1e-0654.3
NC_015186:2884866:289476128947612895717957Acidiphilium multivorum AIU301, complete genomecytochrome c oxidase subunit II2e-0653.1
NC_011761:2785660:283254228325422833306765Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completecytochrome c oxidase, aa3-type, subunit II5e-0652
NC_011206:2685499:273238127323812733145765Acidithiobacillus ferrooxidans ATCC 53993, complete genomecytochrome c oxidase subunit II5e-0652
NC_015942:1824847:185393918539391854703765Acidithiobacillus ferrivorans SS3 chromosome, complete genomecytochrome c oxidase subunit II9e-0651.2