Pre_GI: BLASTP Hits

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Query: NC_001263:1378605:1377845 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 1377845, End: 1378606, Length: 762

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015161:758929:781069781069781869801Deinococcus proteolyticus MRP chromosome, complete genomeABC-type transporter, periplasmic subunit2e-70265
NC_012491:4987280:501000350100035010773771Brevibacillus brevis NBRC 100599, complete genomeprobable ABC transporter substrate binding protein4e-32138
NC_014831:1557485:1558876155887615599131038Thermaerobacter marianensis DSM 12885 chromosome, complete genomeperiplasmic binding protein3e-1582.4
NC_010718:2513917:252235825223582523326969Natranaerobius thermophilus JW/NM-WN-LF, complete genomeperiplasmic binding protein2e-1272.8
NC_010511:5169338:518820251882025188996795Methylobacterium sp. 4-46 chromosome, complete genomeperiplasmic binding protein5e-1271.2
NC_010505:1205747:120574712057471206523777Methylobacterium radiotolerans JCM 2831, complete genomeperiplasmic binding protein1e-1170.5
NC_016582:1707756:172890317289031729832930Streptomyces bingchenggensis BCW-1 chromosome, complete genomeperiplasmic binding protein3e-1168.9
NC_010505:5583000:559090955909095591733825Methylobacterium radiotolerans JCM 2831, complete genomeperiplasmic binding protein3e-1065.5
NC_008570:1852286:186623018662301867051822Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeperiplasmic binding protein1e-0963.5
NC_015424:1603000:162345416234541624257804Aeromonas veronii B565 chromosome, complete genomeperiplasmic binding protein2e-0962.8
NC_009348:2836969:284033728403372841143807Aeromonas salmonicida subsp. salmonicida A449, complete genomecobalamin binding protein BtuF6e-0961.2
NC_001263:2574755:2595145259514525961521008Deinococcus radiodurans R1 chromosome 1, complete sequenceiron ABC transporter, periplasmic substrate-binding protein, putative2e-0859.3
NC_015703:4531578:453664145366414537429789Runella slithyformis DSM 19594 chromosome, complete genomeABC transporter periplasmic subunit7e-0857.8
NC_013385:1617338:1629574162957416310251452Ammonifex degensii KC4, complete genomecopper amine oxidase domain protein3e-0755.8
NC_015966:2337833:234254823425482343354807Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeABC transporter periplasmic subunit3e-0755.8
NC_000917:1246806:124587512458751246809935Archaeoglobus fulgidus DSM 4304, complete genomespermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein (potD)2e-0755.8
NC_011989:2262881:226695322669532267891939Agrobacterium vitis S4 chromosome 1, complete sequenceABC transporter substrate binding protein (hemin)8e-0754.3
NC_014623:9038177:905984190598419060704864Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeiron-binding protein1e-0653.9
NC_014483:1376500:1383180138318013841871008Paenibacillus polymyxa E681 chromosome, complete genomeABC-type Fe3+-hydroxamate transport system, periplasmic component2e-0653.5
NC_008010:105665:126435126435127304870Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceperiplasmic binding protein2e-0652.8
NC_002505:2537655:254592025459202546750831Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein9e-0650.8
NC_009457:2095366:209915220991522099982831Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein9e-0650.8
NC_012578:2479150:248293624829362483766831Vibrio cholerae M66-2 chromosome I, complete sequenceVitamin B12-binding protein9e-0650.8
NC_012582:2626786:263057226305722631402831Vibrio cholerae O395 chromosome chromosome I, complete sequenceVitamin B12-binding protein precursor9e-0650.8
NC_012668:1036000:104791610479161048746831Vibrio cholerae MJ-1236 chromosome 1, complete sequencevitamin B12 ABC transporter B12-binding component BtuF9e-0650.8
NC_016445:2012294:201607720160772016907831Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completevitamin B12 transport system substrate-binding protein9e-0650.8
NC_016944:2588435:259221825922182593048831Vibrio cholerae IEC224 chromosome I, complete sequencevitamin B12 transport system substrate-binding protein9e-0650.8
NC_015422:1163752:118794311879431188842900Alicycliphilus denitrificans K601 chromosome, complete genomeABC transporter periplasmic subunit1e-0550.8