Query: NC_020134:301500 Clostridium stercorarium subsp. stercorarium DSM 8532, complete
D: 26.7931
Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria
General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.
Number of Neighbours: 48
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Subject Host Description |
Compositional Similarity |
Proposed Island Flow | Subject Island D |
---|
NC_016894:1092005* | Acetobacterium woodii DSM 1030 chromosome, complete genome | 75.2206 % | Subject ←→ Query | 24.1184 |
NC_020134:586840 | Clostridium stercorarium subsp. stercorarium DSM 8532, complete | 85.3554 % | Subject ←→ Query | 26.3771 |
NC_020134:343402 | Clostridium stercorarium subsp. stercorarium DSM 8532, complete | 87.5735 % | Subject ←→ Query | 26.3801 |
UCMB5137:1834999 | Bacillus atrophaeus UCMB-5137 | 77.4449 % | Subject ←→ Query | 27.1036 |
NC_016609:8251438* | Niastella koreensis GR20-10 chromosome, complete genome | 75.0123 % | Subject ←→ Query | 27.1918 |
NC_020134:1173000* | Clostridium stercorarium subsp. stercorarium DSM 8532, complete | 88.6121 % | Subject ←→ Query | 27.7639 |
NC_020134:2801199* | Clostridium stercorarium subsp. stercorarium DSM 8532, complete | 84.5404 % | Subject ←→ Query | 27.9973 |
NC_016023:1658377 | Bacillus coagulans 36D1 chromosome, complete genome | 75.3033 % | Subject ←→ Query | 28.1001 |
NC_016023:755237 | Bacillus coagulans 36D1 chromosome, complete genome | 75.7996 % | Subject ←→ Query | 28.1884 |
NC_020134:2193900* | Clostridium stercorarium subsp. stercorarium DSM 8532, complete | 85.8609 % | Subject ←→ Query | 28.7889 |
NC_020134:2832857* | Clostridium stercorarium subsp. stercorarium DSM 8532, complete | 87.1293 % | Subject ←→ Query | 29.5505 |
NC_016023:1419217* | Bacillus coagulans 36D1 chromosome, complete genome | 76.011 % | Subject ←→ Query | 30.2076 |
NC_014152:305955* | Thermincola sp. JR, complete genome | 75.0123 % | Subject ←→ Query | 30.3988 |
NC_015703:1992000* | Runella slithyformis DSM 19594 chromosome, complete genome | 76.9056 % | Subject ←→ Query | 31.5564 |
NC_020134:2948000* | Clostridium stercorarium subsp. stercorarium DSM 8532, complete | 86.0692 % | Subject ←→ Query | 35.2359 |
NC_017190:871352 | Bacillus amyloliquefaciens LL3 chromosome, complete genome | 76.8321 % | Subject ←→ Query | 35.6367 |
NC_016610:2489415* | Tannerella forsythia ATCC 43037 chromosome, complete genome | 75.3615 % | Subject ←→ Query | 35.7292 |
NC_014624:1768226 | Eubacterium limosum KIST612 chromosome, complete genome | 75.8027 % | Subject ←→ Query | 35.9105 |
NC_015500:2329957* | Treponema brennaborense DSM 12168 chromosome, complete genome | 77.2794 % | Subject ← Query | 36.8007 |
NC_017190:852171 | Bacillus amyloliquefaciens LL3 chromosome, complete genome | 77.1875 % | Subject ← Query | 37.3966 |
NC_016641:2894899 | Paenibacillus terrae HPL-003 chromosome, complete genome | 78.5018 % | Subject ← Query | 37.4094 |
NC_017188:2221705 | Bacillus amyloliquefaciens TA208 chromosome, complete genome | 77.0312 % | Subject ← Query | 39.9662 |
NC_013216:426877 | Desulfotomaculum acetoxidans DSM 771, complete genome | 75.4013 % | Subject ← Query | 40.1359 |
NC_017191:2223740 | Bacillus amyloliquefaciens XH7 chromosome, complete genome | 76.9455 % | Subject ← Query | 41.0813 |