Pre_GI: OUP Neighbours

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Query: NC_010161:1811000 Bartonella tribocorum CIP 105476, complete genome

D: 27.9374

Host Lineage: Bartonella tribocorum; Bartonella; Bartonellaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This organism was isolated from the blood of wild rats and from fleas obtained from wild rats. Transmission of these organisms is often through an insect vector. Once in a host, this intracellular pathogen is internalized by an actin-dependent mechanism, and primarily targets endothelial cells, although other cells can be infected. The proliferation of the vascular endothelium (bacillary angiomatosis) is characterisitic of Bartonella infection and results in multiplication of the bacterium's host cells. Infected macrophages are stimulated to release vascular endothelial growth factor (VEGF) and interleukin 1 beta, both of which promote angiogenesis. Endothelial cells are also stimulated to grow and divide by direct contact with bacterial cells. In addition, programmed cell death (apoptosis) of endothelial cells is inhibited, combatting a common mechanism eukaryotic cells use to deal with bacterial infection. Other pathogenicity factors include pili and outer membrane adhesins for attachment to host cells. This organism is genetically related to Bartonella elizabethae which was isolated from a case of endocarditis in a human.

Number of Neighbours: 14




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_015470:1096232*Chlamydophila psittaci 6BC chromosome, complete genome76.7218 %Subject ←→ Query21.9084
NC_005955:1259393*Bartonella quintana str. Toulouse, complete genome84.5312 %Subject ←→ Query23.094
NC_000117:639268*Chlamydia trachomatis D/UW-3/CX, complete genome75.1164 %Subject ←→ Query24.2461
NC_005956:1521736Bartonella henselae str. Houston-1, complete genome84.2739 %Subject ←→ Query24.4934
NC_013512:126915*Sulfurospirillum deleyianum DSM 6946, complete genome75.2267 %Subject ←→ Query25.149
NC_008783:145305Bartonella bacilliformis KC583, complete genome79.7733 %Subject ←→ Query26.0032
NC_005955:1284500*Bartonella quintana str. Toulouse, complete genome78.4406 %Subject ←→ Query27.0975
NC_012846:2004711*Bartonella grahamii as4aup, complete genome81.6268 %Subject ←→ Query27.95
NC_013009:225722*Neorickettsia risticii str. Illinois, complete genome75.0613 %Subject ←→ Query30.3647
NC_008783:177161*Bartonella bacilliformis KC583, complete genome76.7647 %Subject ←→ Query30.6709
NC_010161:1949637Bartonella tribocorum CIP 105476, complete genome76.4369 %Subject ←→ Query31.1808
NC_005956:1648000*Bartonella henselae str. Houston-1, complete genome80.7935 %Subject ←→ Query31.2454
NC_010161:2548254Bartonella tribocorum CIP 105476, complete genome77.5337 %Subject ←→ Query31.3939
NC_010161:2155500*Bartonella tribocorum CIP 105476, complete genome79.0656 %Subject ←→ Query32.5841