Pre_GI Gene

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Host: NC_000117 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_000117:639268 Chlamydia trachomatis D/UW-3/CX, complete genome

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: Isolated from the cervix of an asymptomatic female. Opportunistic pathogen. Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. This species causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes. This is a trachoma biovar, serovar D strain.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6392686404431176Gen Secretion Protein FQuickGO ontologyBLASTP
6404556419601506Gen Secretion Protein EQuickGO ontologyBLASTP
6419446442262283Gen Secretion Protein DQuickGO ontologyBLASTP
6442276454561230hypothetical proteinBLASTP
6455846466541071Aminopeptidase PQuickGO ontologyBLASTP
6466656483951731DNA mismatch repair proteinQuickGO ontologyBLASTP
648690649388699Low Calcium Response Protein HQuickGO ontologyBLASTP
649405649764360hypothetical proteinBLASTP
6498016512641464hypothetical proteinBLASTP
6512956526141320hypothetical proteinBLASTP
652692653675984hypothetical proteinBLASTP
6539806558871908threonyl-tRNA synthetaseQuickGO ontologyBLASTP
656338657105768chromosome partitioning ATPase-CHLTR plasmid protein homolog GP5DQuickGO ontologyBLASTP
657110657901792CHLTR Plasmid ParalogQuickGO ontologyBLASTP
657867658418552hypothetical proteinBLASTP
6586176596571041tryptophanyl-tRNA synthetaseQuickGO ontologyBLASTP
6596826616882007excinuclease ABC subunit BQuickGO ontologyBLASTP
6618506631241275phosphopyruvate hydrataseQuickGO ontologyBLASTP