Pre_GI: OUP Neighbours

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Query: NC_006510:3133965 Geobacillus kaustophilus HTA426, complete genome

D: 43.1524

Host Lineage: Geobacillus kaustophilus; Geobacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: Geobacillus kaustophilus strain HTA426 was first isolated from deep sea sediment of the Mariana Trench in the Pacific Ocean and belongs to a closely related group of thermophilic Bacillus spp. Members of this genus were originally classified as Bacillus. Recent rDNA analysis and DNA-DNA hybridization studies using spore-forming thermophilic subsurface isolates provided enough evidence to define the phylogenetically distinct, physiologically and morphologically consistent taxon Geobacillus. Geobacillus species are chemo-organotrophic, obligately thermophilic, motile, spore-forming, aerobic or facultatively anaerobic. This organism was compared with mesophilic Bacillus spp. to identify genome characteristics and specific genes related to thermophilia. Analysis of the amino acid compositions showed clear differences between Geobacillus kaustophilus and the mesophilic bacilli. In addition, the higher G+C content in Geobacillus kaustophilus rRNA also appears correlated to thermophilia. In addition, tRNA modification by the Geobacillus kaustophilus specific tRNA methyltransferases probably aids in the thermoadaptation of this organism.

Number of Neighbours: 84




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_011528:1769349*Coxiella burnetii CbuK_Q154, complete genome75.9651 %Subject → Query24.6589
NC_011026:1181940Chloroherpeton thalassium ATCC 35110, complete genome76.4583 %Subject → Query24.8017
NC_002971:1545924*Coxiella burnetii RSA 493, complete genome75.4289 %Subject → Query24.9297
NC_010117:1633447*Coxiella burnetii RSA 331, complete genome76.6544 %Subject → Query25.1409
NC_013411:3251500Geobacillus sp. Y412MC61, complete genome81.829 %Subject → Query26.0153
NC_014479:3079855Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete75.4013 %Subject → Query26.4835
NC_015975:923812Lactobacillus ruminis ATCC 27782 chromosome, complete genome78.3088 %Subject → Query27.0124
NC_015660:1076159Geobacillus thermoglucosidasius C56-YS93 chromosome, complete75.4718 %Subject → Query27.3103
NC_016023:729843Bacillus coagulans 36D1 chromosome, complete genome78.5938 %Subject → Query27.5069
NC_015660:739040Geobacillus thermoglucosidasius C56-YS93 chromosome, complete79.6998 %Subject → Query27.5538
NC_015634:2445396*Bacillus coagulans 2-6 chromosome, complete genome76.7647 %Subject → Query27.7146
NC_015975:789312Lactobacillus ruminis ATCC 27782 chromosome, complete genome75.5545 %Subject → Query27.8749
NC_011567:2468708Anoxybacillus flavithermus WK1, complete genome75.9007 %Subject → Query27.9939
NC_002570:1426000*Bacillus halodurans C-125, complete genome79.5711 %Subject → Query28.0186
NC_015660:2685842Geobacillus thermoglucosidasius C56-YS93 chromosome, complete85.4228 %Subject → Query28.0392
NC_012793:383612*Geobacillus sp. WCH70, complete genome78.8664 %Subject → Query28.1218
NC_012793:3275751*Geobacillus sp. WCH70, complete genome75.7629 %Subject → Query28.4508
NC_006582:755294Bacillus clausii KSM-K16, complete genome77.068 %Subject → Query28.6173
NC_015660:1988000Geobacillus thermoglucosidasius C56-YS93 chromosome, complete77.2304 %Subject → Query28.8303
NC_006322:3198829Bacillus licheniformis ATCC 14580, complete genome78.5325 %Subject → Query28.8607
NC_015660:391627*Geobacillus thermoglucosidasius C56-YS93 chromosome, complete78.845 %Subject → Query28.9358
NC_015660:3467579*Geobacillus thermoglucosidasius C56-YS93 chromosome, complete78.6765 %Subject → Query28.9622
NC_006322:1959918Bacillus licheniformis ATCC 14580, complete genome80.3339 %Subject → Query29.4747
NC_014976:3546884Bacillus subtilis BSn5 chromosome, complete genome75.2267 %Subject → Query29.8243
NC_015975:380500*Lactobacillus ruminis ATCC 27782 chromosome, complete genome76.3327 %Subject → Query29.8688
NC_000964:1330000Bacillus subtilis subsp. subtilis str. 168, complete genome75.9773 %Subject → Query30.5326
NC_006322:1932847Bacillus licheniformis ATCC 14580, complete genome77.5153 %Subject → Query30.5728
NC_014551:576000Bacillus amyloliquefaciens DSM 7, complete genome75.9467 %Subject → Query30.6663
NC_006322:1415863Bacillus licheniformis ATCC 14580, complete genome80.2328 %Subject → Query30.8571
NC_006510:2910000Geobacillus kaustophilus HTA426, complete genome82.0098 %Subject → Query30.9906
NC_006322:1536426Bacillus licheniformis ATCC 14580, complete genome75.239 %Subject → Query31.0007
NC_006582:2944237*Bacillus clausii KSM-K16, complete genome77.9841 %Subject → Query31.4687
NC_006322:717953*Bacillus licheniformis ATCC 14580, complete genome81.4706 %Subject → Query31.5251
NC_012914:3315947Paenibacillus sp. JDR-2, complete genome76.8689 %Subject → Query31.6513
NC_002570:832480Bacillus halodurans C-125, complete genome77.7512 %Subject → Query31.898
NC_006322:2173500Bacillus licheniformis ATCC 14580, complete genome75.1593 %Subject → Query31.9935
NC_002570:1195356Bacillus halodurans C-125, complete genome76.1428 %Subject → Query32.2228
NC_006322:2851215Bacillus licheniformis ATCC 14580, complete genome78.9124 %Subject → Query32.3051
NC_006582:4256915*Bacillus clausii KSM-K16, complete genome78.4467 %Subject → Query32.4815
NC_006322:2658587Bacillus licheniformis ATCC 14580, complete genome78.4161 %Subject → Query32.5167
NC_015634:2779392Bacillus coagulans 2-6 chromosome, complete genome76.299 %Subject → Query32.7639
NC_011567:139598*Anoxybacillus flavithermus WK1, complete genome77.0558 %Subject → Query33.0564
NC_014551:691594*Bacillus amyloliquefaciens DSM 7, complete genome75.5392 %Subject → Query33.1469
NC_012914:5194791Paenibacillus sp. JDR-2, complete genome75.1746 %Subject ←→ Query33.2273
NC_013406:1707570Paenibacillus sp. Y412MC10 chromosome, complete genome77.1507 %Subject ←→ Query33.384
NC_016023:2265000Bacillus coagulans 36D1 chromosome, complete genome75.7751 %Subject ←→ Query33.3949
NC_011567:1*Anoxybacillus flavithermus WK1, complete genome78.1985 %Subject ←→ Query33.4931
NC_011026:2269986*Chloroherpeton thalassium ATCC 35110, complete genome78.2077 %Subject ←→ Query33.5605
NC_016047:2480921Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete75.4749 %Subject ←→ Query33.5684
NC_006322:2592176*Bacillus licheniformis ATCC 14580, complete genome80.7292 %Subject ←→ Query34.1844
NC_006322:1994000Bacillus licheniformis ATCC 14580, complete genome77.9259 %Subject ←→ Query34.2412
NC_006322:3418268Bacillus licheniformis ATCC 14580, complete genome76.3419 %Subject ←→ Query34.2705
NC_013406:7024149Paenibacillus sp. Y412MC10 chromosome, complete genome76.8413 %Subject ←→ Query34.3423
NC_015975:1056731*Lactobacillus ruminis ATCC 27782 chromosome, complete genome75.9835 %Subject ←→ Query34.5635
NC_006322:741516Bacillus licheniformis ATCC 14580, complete genome82.7482 %Subject ←→ Query34.6233
NC_006322:3628143Bacillus licheniformis ATCC 14580, complete genome77.7114 %Subject ←→ Query34.7261
NC_015634:959396Bacillus coagulans 2-6 chromosome, complete genome75.6281 %Subject ←→ Query35.0988
NC_011567:2327870*Anoxybacillus flavithermus WK1, complete genome77.6562 %Subject ←→ Query35.0994
NC_011567:388358*Anoxybacillus flavithermus WK1, complete genome78.0944 %Subject ←→ Query35.6127
NC_012491:5914500*Brevibacillus brevis NBRC 100599, complete genome75.3922 %Subject ←→ Query35.6583
NC_015634:3017564*Bacillus coagulans 2-6 chromosome, complete genome78.4252 %Subject ←→ Query35.8382
NC_006322:567987*Bacillus licheniformis ATCC 14580, complete genome77.5092 %Subject ←→ Query35.8713
NC_015634:2595500Bacillus coagulans 2-6 chromosome, complete genome75.5607 %Subject ←→ Query35.9909
NC_013406:5066769*Paenibacillus sp. Y412MC10 chromosome, complete genome76.0999 %Subject ←→ Query36.0422
NC_009725:200071Bacillus amyloliquefaciens FZB42, complete genome75.5607 %Subject ←→ Query36.1399
NC_006510:3321426Geobacillus kaustophilus HTA426, complete genome78.2659 %Subject ←→ Query36.1711
NC_011567:238249*Anoxybacillus flavithermus WK1, complete genome77.0067 %Subject ←→ Query36.1888
NC_006322:1119471Bacillus licheniformis ATCC 14580, complete genome76.5043 %Subject ←→ Query36.4447
NC_014551:605855Bacillus amyloliquefaciens DSM 7, complete genome75.8762 %Subject ←→ Query36.6948
NC_006322:203932*Bacillus licheniformis ATCC 14580, complete genome76.0386 %Subject ←→ Query37.4168
NC_013406:3819577Paenibacillus sp. Y412MC10 chromosome, complete genome78.7898 %Subject ←→ Query37.5182
NC_009725:692237Bacillus amyloliquefaciens FZB42, complete genome75.6618 %Subject ←→ Query37.5873
NC_009725:3809403Bacillus amyloliquefaciens FZB42, complete genome75.1961 %Subject ←→ Query38.0857
NC_015634:2492771Bacillus coagulans 2-6 chromosome, complete genome75.7812 %Subject ←→ Query38.165
NC_013406:3672857Paenibacillus sp. Y412MC10 chromosome, complete genome79.4792 %Subject ←→ Query39.5404
NC_011060:1288862*Pelodictyon phaeoclathratiforme BU-1, complete genome75.3033 %Subject ←→ Query39.7342
NC_006510:887545Geobacillus kaustophilus HTA426, complete genome78.6795 %Subject ←→ Query40.5733
NC_014219:830966*Bacillus selenitireducens MLS10 chromosome, complete genome77.7114 %Subject ←→ Query40.6965
NC_006510:591339Geobacillus kaustophilus HTA426, complete genome82.9289 %Subject ←→ Query42.2291
NC_013406:3583474Paenibacillus sp. Y412MC10 chromosome, complete genome75.7384 %Subject ←→ Query42.5396
NC_013406:303218*Paenibacillus sp. Y412MC10 chromosome, complete genome76.8137 %Subject ←→ Query43.5239
NC_013406:3521489Paenibacillus sp. Y412MC10 chromosome, complete genome79.5527 %Subject ←→ Query45.1818
NC_015690:1109335Paenibacillus mucilaginosus KNP414 chromosome, complete genome75.1685 %Subject ←→ Query46.8461
NC_013406:6494079Paenibacillus sp. Y412MC10 chromosome, complete genome76.1397 %Subject ←→ Query48.8846