Pre_GI: BLASTP Hits

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Query: NC_017269:303500:319999 Vibrio cholerae LMA3984-4 chromosome II, complete sequence

Start: 319999, End: 320250, Length: 252

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012667:931390:965996965996966268273Vibrio cholerae MJ-1236 chromosome 2, complete genomestability protein StbD4e-41166
NC_016446:119914:120523120523120792270Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completeantitoxin of toxin-antitoxin stability system5e-41166
NC_016945:370471:419819419819420070252Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein5e-41166
NC_002506:370629:419979419979420251273Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein4e-41166
NC_009456:787322:834440834440834712273Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein4e-41166
NC_012583:361241:429230429230429502273Vibrio cholerae O395 chromosome chromosome II, complete sequenceAntitoxin of toxin-antitoxin stability system4e-41166
NC_018645:2390032:240154024015402401791252Desulfobacula toluolica Tol2, complete genomeantitoxin of toxin-antitoxin stability system3e-24110
NC_020304:968936:978060978060978311252Desulfocapsa sulfexigens DSM 10523, complete genomeprevent-host-death family protein4e-22103
NC_003197:1611302:162683916268391627087249Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein6e-1682.8
NC_011094:1584038:159412715941271594375249Salmonella enterica subsp. enterica serovar Schwarzengrund strstability protein StbD6e-1682.8
NC_016810:1576636:158369215836921583940249Salmonella enterica subsp. enterica serovar Typhimurium strplasmid stability protein6e-1682.8
NC_016856:1621279:163681616368161637064249Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein6e-1682.8
NC_016857:1576636:158369215836921583940249Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein6e-1682.8
NC_016860:1614280:162452916245291624777249Salmonella enterica subsp. enterica serovar Typhimurium strputative stability protein StbD6e-1682.8
NC_016863:1575488:158500715850071585255249Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein6e-1682.8
NC_011149:1578451:158834815883481588596249Salmonella enterica subsp. enterica serovar Agona str. SL483,putative stability protein StbD6e-1682.8
NC_012962:3568046:360445936044593604710252Photorhabdus asymbiotica, complete genomehypothetical protein1e-1479
NC_020908:4093560:410817841081784108423246Octadecabacter arcticus 238, complete genomeaddiction module antidote protein3e-1477
NC_002506:370629:399576399576399824249Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein2e-1374.7
NC_009456:787322:852832852832853080249Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein2e-1374.7
NC_012580:353273:375268375268375516249Vibrio cholerae M66-2 chromosome II, complete sequenceantitoxin of toxin-antitoxin stability system, StbD family2e-1374.7
NC_012583:361241:410862410862411110249Vibrio cholerae O395 chromosome chromosome II, complete sequenceAntitoxin of toxin-antitoxin stability system, StbD family2e-1374.7
NC_012667:931390:986424986424986672249Vibrio cholerae MJ-1236 chromosome 2, complete genomeDNA for RVC repeated sequence2e-1374.7
NC_016446:49618:100115100115100363249Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completeantitoxin of toxin-antitoxin stability system, StbD family2e-1374.7
NC_016945:370471:399395399395399643249Vibrio cholerae IEC224 chromosome II, complete sequenceantitoxin of toxin-antitoxin stability system, StbD family protein2e-1374.7
NC_012691:3126500:312833331283333128581249Tolumonas auensis DSM 9187, complete genomeprevent-host-death family protein1e-1271.6
NC_014836:1052214:106568310656831065928246Desulfurispirillum indicum S5 chromosome, complete genomeprevent-host-death family protein4e-1167
NC_012917:833721:833995833995834246252Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein2e-1064.3
NC_015942:2213710:222955622295562229810255Acidithiobacillus ferrivorans SS3 chromosome, complete genomestability protein StbD2e-0961.6
NC_006856:95830:112815112815113066252Salmonella enterica subsp. enterica serovar Choleraesuis strorf443e-0857.4
NC_016628:1:542054205608189Vibrio furnissii NCTC 11218 chromosome 2, complete sequencestability protein StbD4e-0857
NC_014500:3744705:375363937536393753932294Dickeya dadantii 3937 chromosome, complete genomeStability protein StbD5e-0650.1