Pre_GI: BLASTP Hits

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Query: NC_017218:1655009:1666981 Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genome

Start: 1666981, End: 1669419, Length: 2439

Host Lineage: Bifidobacterium breve; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is one of the first colonizers of the human gastrointestinal tract, and is a dominant member of the adult intestinal microbial community. Probiotics are live microbial supplements which benefit the health of an animal by maintaining normal microbial flora, producing vitamins, and stimulating the mucosal immune system




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008618:1456000:1468122146812214705392418Bifidobacterium adolescentis ATCC 15703, complete genomepredicted CRISPR-associated helicase0832
NC_013714:1830959:1842567184256718451102544Bifidobacterium dentium Bd1, complete genomeCRISPR-associated helicase Cas30826
NC_008942:815280:8345898345898370932505Methanocorpusculum labreanum Z, complete genomehypothetical protein1e-110401
NC_009523:5438000:5448155544815554508692715Roseiflexus sp. RS-1 chromosome, complete genomeCRISPR-associated helicase Cas35e-109395
NC_007759:2748000:2758821275882127613282508Syntrophus aciditrophicus SB, complete genomeATP-dependent RNA helicase1e-108394
NC_006513:1949751:1959781195978119622672487Azoarcus sp. EbN1, complete genomepredicted CRISPR-associated helicase9e-108391
NC_010995:2798000:2807956280795628104092454Cellvibrio japonicus Ueda107, complete genomeCRISPR-associated helicase Cas3 domain protein1e-106387
NC_016584:1912000:1918122191812219205692448Desulfosporosinus orientis DSM 765 chromosome, complete genomeCRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD2e-87323
NC_010610:1385066:1400770140077014032082439Lactobacillus fermentum IFO 3956, complete genomehypothetical protein2e-81304
NC_011060:1746000:1754304175430417565232220Pelodictyon phaeoclathratiforme BU-1, complete genomeCRISPR-associated helicase Cas39e-77288
NC_012470:1606000:1612460161246016149132454Streptococcus equi subsp. zooepidemicus, complete genomeCRISPR-associated helicase4e-74280
NC_021175:353292:3564363564363588502415Streptococcus oligofermentans AS 1.3089, complete genomehypothetical protein3e-72273
NC_014484:447889:4532194532194555282310Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein1e-68261
NC_019968:8397:1357413574157692196Prevotella dentalis DSM 3688 chromosome 2, complete sequenceCRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD3e-67256
NC_014960:1380500:1389942138994213931483207Anaerolinea thermophila UNI-1, complete genomehypothetical protein4e-67256
NC_016630:28410:3300133001355892589Filifactor alocis ATCC 35896 chromosome, complete genomeATP-dependent RNA helicase1e-65251
NC_007777:3962000:3963334396333439655892256Frankia sp. CcI3, complete genomeCRISPR-associated helicase Cas3, core3e-65250
NC_009615:1354122:1372739137273913749642226Parabacteroides distasonis ATCC 8503 chromosome, complete genomehelicase6e-65249
NC_006177:324363:3470963470963492552160Symbiobacterium thermophilum IAM 14863, complete genomehypothetical protein6e-65249
NC_014364:1116439:1120569112056911227942226Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeCRISPR-associated helicase Cas35e-65249
NC_015387:261799:2664582664582685932136Marinithermus hydrothermalis DSM 14884 chromosome, complete genomemetal dependent phosphohydrolase3e-64247
NC_004757:905417:9093379093379113792043Nitrosomonas europaea ATCC 19718, complete genomeDEAD/DEAH box helicase:HD domain9e-64245
NC_007947:621213:6246826246826269192238Methylobacillus flagellatus KT, complete genomemetal dependent phosphohydrolase1e-63245
NC_011963:1979136:1986779198677919890132235Rhodobacter sphaeroides KD131 chromosome 1, complete sequenceCRISPR-associated helicase, Cas3 family4e-63243
NC_015976:1893076:1907423190742319097742352Sphingobium sp. SYK-6, complete genomeCRISPR-associated helicase Cas31e-62241
NC_015677:3685452:3691484369148436937722289Ramlibacter tataouinensis TTB310 chromosome, complete genomehypothetical protein4e-62240
NC_013740:842841:8744968744968766822187Acidaminococcus fermentans DSM 20731, complete genomemetal dependent phosphohydrolase4e-62239
NC_009337:1448607:1453899145389914558961998Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeCRISPR-associated helicase Cas3 family protein7e-62239
NC_013204:2305140:2318079231807923202772199Eggerthella lenta DSM 2243, complete genomemetal dependent phosphohydrolase4e-61236
NC_014221:1786122:1788888178888817912062319Truepera radiovictrix DSM 17093 chromosome, complete genomeCRISPR-associated helicase Cas34e-60233
NC_007512:1459685:1465575146557514676532079Pelodictyon luteolum DSM 273, complete genomeCRISPR-associated helicase Cas3, core4e-58226
NC_005085:1269787:1285455128545512875362082Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein1e-56221
NC_015873:2197412:2197412219741221996042193Megasphaera elsdenii DSM 20460, complete genomemetal dependent phosphohydrolase2e-56221
NC_020126:9726992:9738646973864697408802235Myxococcus stipitatus DSM 14675, complete genomeCRISPR-associated helicase Cas32e-55217
NC_019673:2051363:2085060208506020872942235Saccharothrix espanaensis DSM 44229 complete genomeCRISPR-associated helicase Cas3 family protein protein5e-53210
NC_013947:3785332:3796425379642537987042280Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeCRISPR-associated helicase Cas32e-47191
NC_011899:1603500:1626098162609816285662469Halothermothrix orenii H 168, complete genomeCRISPR-associated helicase Cas34e-47190
NC_008148:258292:2745562745562770212466Rubrobacter xylanophilus DSM 9941, complete genomeCRISPR-associated helicase Cas3, core6e-46186
NC_017161:1117741:1126688112668811289942307Hydrogenobacter thermophilus TK-6 chromosome, complete genomeCRISPR-associated helicase Cas33e-41170
NC_013799:1117750:1126830112683011291362307Hydrogenobacter thermophilus TK-6, complete genomeCRISPR-associated helicase3e-41170
NC_014915:332784:3446143446143469442331Geobacillus sp. Y412MC52 chromosome, complete genomeCRISPR-associated HD domain protein6e-41169
NC_015416:2723189:2751286275128627537542469Methanosaeta concilii GP-6 chromosome, complete genomecrispr-associated helicase Cas35e-40166
NC_013526:567500:5765085765085790842577Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeCRISPR-associated helicase Cas31e-38162
NC_014209:2204515:2217893221789322202472355Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,CRISPR-associated helicase Cas38e-39162
NC_012438:776260:7906217906217929092289Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeCRISPR-associated helicase Cas33e-38160
NC_010003:2056000:2075621207562120778132193Petrotoga mobilis SJ95, complete genomeCRISPR-associated helicase Cas34e-38160
NC_009715:873280:8808488808488830222175Campylobacter curvus 525.92 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein4e-38160
NC_015660:3467579:3467579346757934700622484Geobacillus thermoglucosidasius C56-YS93 chromosome, completeCRISPR-associated HD domain-containing protein5e-38160
NC_007681:482445:4859174859174883042388Methanosphaera stadtmanae DSM 3091, complete genomepredicted helicase1e-37158
NC_014098:2735500:2740062274006227426232562Bacillus tusciae DSM 2912 chromosome, complete genomeCRISPR-associated helicase Cas31e-35151
NC_016884:3219030:3251274325127432536402367Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeCRISPR-associated HD domain-containing protein3e-35150
NC_015757:2343193:2373204237320423755702367Sulfobacillus acidophilus TPY chromosome, complete genomeCRISPR-associated helicase Cas33e-35150
NC_015589:3053504:3063199306319930655742376Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeCRISPR-associated HD domain-containing protein8e-34146
NC_021184:823000:8283508283508306982349Desulfotomaculum gibsoniae DSM 7213, complete genomeCRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD2e-33144
NC_003901:678340:6852926852926877242433Methanosarcina mazei Go1, complete genomehypothetical protein7e-33143
NC_015387:2072237:2079360207936020816362277Marinithermus hydrothermalis DSM 14884 chromosome, complete genomemetal dependent phosphohydrolase8e-33142
NC_019897:3251639:3287049328704932894392391Thermobacillus composti KWC4 chromosome, complete genomeCRISPR-associated helicase Cas35e-32140
NC_017278:258921:2589212589212611582238Thermus sp. CCB_US3_UF1 chromosome, complete genomehypothetical protein4e-30133
NC_012108:616088:6267306267306289912262Desulfobacterium autotrophicum HRM2, complete genomeputative CRISPR-associated helicase Cas3 (ATP-dependent DNA helicase)1e-29132
NC_007681:1082000:1085878108587810886312754Methanosphaera stadtmanae DSM 3091, complete genomepredicted helicase7e-28126
NC_014935:1047411:1058060105806010602372178Nitratifractor saLSUginis DSM 16511 chromosome, complete genomecrispr-associated helicase, cas3 family7e-27123
NC_007955:1198994:1207778120777812104202643Methanococcoides burtonii DSM 6242, complete genomeCRISPR-associated helicase Cas35e-1894
NC_021184:504728:5252555252555276392385Desulfotomaculum gibsoniae DSM 7213, complete genomeCRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD1e-1689
NC_019942:1370872:1377646137764613798472202Aciduliprofundum sp. MAR08-339, complete genomeDEAD/DEAH box helicase1e-1585.9
NC_015865:685882:6936206936206959262307Thermococcus sp. 4557 chromosome, complete genomeCRISPR-associated helicase Cas3-like protein1e-1482.4
NC_020411:583503:5965795965795988702292Hydrogenobaculum sp. HO, complete genomeCRISPR-associated helicase Cas33e-1481.3
NC_015587:583530:5966065966065988972292Hydrogenobaculum sp. SHO chromosome, complete genomeCRISPR-associated helicase Cas33e-1481.3
NC_015557:583475:5965515965515988422292Hydrogenobaculum sp. 3684 chromosome, complete genomeCRISPR-associated helicase Cas33e-1481.3
NC_015634:2492771:2505441250544125079872547Bacillus coagulans 2-6 chromosome, complete genomeCRISPR-associated endonuclease Cas4e-1377.4
NC_014624:140000:1452031452031477882586Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein5e-1377.4
NC_015680:1275252:1275252127525212773302079Pyrococcus yayanosii CH1 chromosome, complete genomeCRISPR-associated helicase Cas3 domain-containing protein6e-1376.6
NC_000917:40111:6883068830711092280Archaeoglobus fulgidus DSM 4304, complete genomeATP-dependent RNA helicase, putative3e-1274.7
NC_015966:1316901:1323321132332113254982178Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomemetal dependent phosphohydrolase9e-1272.8
NC_016609:5986500:5992325599232559950962772Niastella koreensis GR20-10 chromosome, complete genomeCRISPR-associated HD domain-containing protein1e-1172.4
NC_010424:1356000:1362881136288113652682388Candidatus Desulforudis audaxviator MP104C, complete genomeCRISPR-associated helicase Cas35e-1170.5
NC_021150:1677811:1699786169978617024912706Azotobacter vinelandii CA6, complete genomeCRISPR-associated helicase Cas3, core6e-1170.1
NC_012560:1677798:1699773169977317024782706Azotobacter vinelandii DJ, complete genomeCRISPR-associated helicase Cas3, core6e-1170.1
NC_015680:841783:8449328449328471092178Pyrococcus yayanosii CH1 chromosome, complete genomeCRISPR-associated helicase Cas32e-1068.6
NC_017096:260333:2653822653822676282247Caldisericum exile AZM16c01, complete genomeputative CRISPR-associated protein4e-1067.4
NC_012440:1249941:1259969125996912622182250Persephonella marina EX-H1, complete genomecrispr-associated helicase Cas37e-1066.6
NC_019978:922978:9399719399719423132343Halobacteroides halobius DSM 5150, complete genomeCRISPR-associated helicase Cas31e-0862.8
NC_014206:1467000:1474954147495414771312178Geobacillus sp. C56-T3 chromosome, complete genomeCRISPR-associated helicase Cas31e-0862.4
NC_011296:1039749:1058944105894410605751632Thermodesulfovibrio yellowstonii DSM 11347, complete genomeCRISPR-associated helicase Cas32e-0862
NC_009486:1103915:1112028111202811143192292Thermotoga petrophila RKU-1 chromosome, complete genomeCRISPR-associated helicase Cas32e-0862
NC_011978:699500:7103537103537115461194Thermotoga neapolitana DSM 4359, complete genomeCRISPR-associated helicase, Cas3 family2e-0861.6
NC_000961:135493:1538931538931559652073Pyrococcus horikoshii OT3, complete genomehypothetical protein2e-0861.6
NC_013894:1:1428214282159881707Thermocrinis albus DSM 14484 chromosome, complete genomeCRISPR-associated helicase Cas34e-0860.8
NC_014831:1843835:1881398188139818845113114Thermaerobacter marianensis DSM 12885 chromosome, complete genomemetal dependent phosphohydrolase1e-0759.7
NC_020134:1783000:1791244179124417935892346Clostridium stercorarium subsp. stercorarium DSM 8532, completeCRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD2e-0758.5
NC_014150:1423758:1423758142375814260522295Brachyspira murdochii DSM 12563 chromosome, complete genomeCRISPR-associated helicase Cas32e-0758.5
NC_009973:77518:9643396433988472415Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU01, completeCRISPR-associated helicase Cas33e-0757.8
NC_013216:921377:9279929279929302262235Desulfotomaculum acetoxidans DSM 771, complete genomeCRISPR-associated helicase Cas36e-0757
NC_015975:1056731:1070620107062010729322313Lactobacillus ruminis ATCC 27782 chromosome, complete genomeCRISPR-associated helicase Cas38e-0756.6
NC_013223:1848689:1869714186971418720562343Desulfohalobium retbaense DSM 5692, complete genomeCRISPR-associated helicase Cas39e-0756.2
NC_000918:246792:2467922467922489812190Aquifex aeolicus VF5, complete genomehypothetical protein2e-0655.1
NC_015518:1569936:1579373157937315808301458Acidianus hospitalis W1 chromosome, complete genomeCRISPR-associated helicase Cas33e-0654.7
NC_015416:2838020:2843201284320128456032403Methanosaeta concilii GP-6 chromosome, complete genomeCRISPR-associated helicase Cas34e-0654.3