Pre_GI Gene

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Host: NC_011963 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011963:1979136 Rhodobacter sphaeroides KD131 chromosome 1, complete sequence

Host Lineage: Rhodobacter sphaeroides; Rhodobacter; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Halophilic, purple nonsulfur photosynthetic bacterium. Capable of producing high levels of biohydrogen (H2). Originally isolated from sea mud off the coast of DaeBu Island, South Korea. Bacteria belonging to the Rhodobacter group are metabolically versatile as they are able to grow using photosynthesis, chemosynthesis, and usually can grow under both anaerobic and aerobic conditions. The most extensively studied bacteria with regards to its photosynthetic capabilities which includes the structure, function and regulation of its photosynthetic membranes, its mechanisms of CO2 and nitrogen fixation, cytochrome diversity and its electron transport systems. It can grow aerobically and anaerobically in the light and anaerobically in the dark. It produces an intracytoplasmic membrane system consisting of membrane invaginations where the light harvesting complexes (LH1 and LH2) and the reaction center are synthesized. Furthermore, it has the ability to detoxify metal oxides and oxyanions and hence has a role in bioremediation.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
197913619809591824ParB family proteinQuickGO ontologyBLASTP
19810821981477396hypothetical proteinBLASTP
19814771981809333hypothetical protein
19818061982015210hypothetical protein
19827161982928213hypothetical protein
19830451983257213hypothetical protein
19832541983532279hypothetical protein
19835291984080552hypothetical protein
19841201984776657hypothetical proteinBLASTP
19849801985558579hypothetical protein
19857641986303540hypothetical protein
198677919890132235CRISPR-associated helicase Cas3 familyQuickGO ontologyBLASTP
19894141990094681CRISPR-associated protein Csd5d familyQuickGO ontologyBLASTP
199009119919411851CRISPR-associated protein Csd1 familyQuickGO ontologyBLASTP
19919461992821876CRISPR-associated protein TM1801 familyQuickGO ontologyBLASTP
19928661993471606CRISPR-associated exonuclease Cas4 familyQuickGO ontologyBLASTP
199346819945021035CRISPR-associated protein Cas1 familyQuickGO ontologyBLASTP
19945041994794291CRISPR-associated protein Cas2 familyQuickGO ontologyBLASTP
19972081997681474Alkylhydroperoxidase like protein AhpD familyQuickGO ontologyBLASTP
19976711998531861RNA polymerase sigma factor SigJQuickGO ontologyBLASTP
199941220001857743-oxoacyl-ACP reductaseQuickGO ontologyBLASTP